Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01206 | TCTCCGAGTTCTCCTTCTGGTGTTCCTCCGACCACTTCTTCACCTCCACCATCTCCGTCAGTTACTTCTGCACCTCCATCTCCGGCAACCACTTCTTCTCCTCCTTCTCCATCAACCTCTTCTTTACCTCCTCCATCTCAGACCAATCAAAATACCGAACCTCCTTCTTCAGTCCCACCTCCTCAGTCACCACCAGCTTCTCCCCCTCCATCTCCTCCATCATCACCCCCACCATCTGCGCCACTTCCTTCTTCGCCACCTCCACCGCTGCTTGAATCTCCCCCACCGCCATCTACTCTGACATCTCCGCCGCCATCACCTCCGATATCACAGTCTCCTCCGCCTCCTCCGACATCTTCACTTCCATCAGCGCCGCCATCACCTCCACCATTGGGTTCCAGTTCACCTCCTCCTCCTCCTCCAGACTTGTCACCACCACCTCCATCCAGCGATTCTCCGCCTCCTCAATCTCCACCTGATACTCCTCCTCAAAACATCTCACCTTCTTCTGTGCCTCCTCCAGCAAATAACACAACACCAACTTCCTCAAATTTTCCACCTCCACCATCACAAAAGTCTCCAGAAAAATCTCCTCCACCTCCTAGACGCCATTCGCCTCCTTCCCCTCTGTCCCAATCTGAACCTCCTGCTTTCTCCTCATCATCTCCATTATTGCCTGACACTCCTCTTCCTTCAATTGCCTCATCAGCTTCACCTCCTTCAGTTTCTCCTACTTCTCCAACTAATTCATCCAGCAGTCCTACTATTTCACCATTACCTGAGAAACCAACTCCAGAGGCAACTCCAGGAAGTGATGTCACGGCCAATGGTTCATCTGGTGATGGGAAACAAAATTCTGGCCCGGTAGTGGCAATTGCAGTTGTAGTTGGGTTCATATTACTCAGTCTCATCATCATGGGTGTATGGTTTGTGAAAAGACGGAAAAGAAGAAACAAATTGAAGAATATCAAGTACACTCTCCCTTCTCCTTTTAATTCCTCGCAAAATTCAGATTCTTCATTTCTTAGGTACCGTTCCCCAGTTGCCTTGGTGGGAAGCCGTTCAGGCAGCGATTTCATGCATTCATCAACCAAGGCCGGTGGAATAAGCAATGCAAGAGGGTTCATATATGAGGACCTAGTCCAAGCTACAAATTCTTTTTCAGCCAAAAATATTTTGGGTGAAGGTGGATTTGGTTGTGTTTACAAAGGCATCCTCTCAGATGGAAGAGAAGTAGCAGTAAAGCAACTGAAAATTGGCGGTGGCCAAGGTGAACGTGAATTTAGAGCCGAGGTTGAGATTATTAGTCGAGTCCACCATCGCCATCTGGTTTCTCTTGTTGGTTATTGTATATCTGAATATCAGAGATTGCTTGTATATGATTATGTTCCAAACAATACTCTGCATTATCATCTCCATGATTATAGTGCATTGGCTCTGGGTTGGGCAACGCGTGTTAGAATTGCCGCTGGCGCTGCTCGGGGGATTGCTTACCTACATGAAGACTGCCATCCACGCATCATTCACAGGGATATTAAGTCTTCAAACATCCTGCTCGATGTCAACTTTGAAGCTCGGGTTGCAGATTTTGGGCTCGCAAAGTTAGCTCTAGATTCGCATACACATGTTACTACTCGTGTTATGGGAACATTTGGCTACATGGCTCCGGAATATGCAACAAGTGGAAAACTGACTGATAAATCTGATGTTTTCTCATTTGGAGTTGTGCTTTTGGAGATAATTACTGGTCGAAAACCCGTAGATTCCTCTCAGCCATTAGGGGATGAGAGCCTAGTTGAATGGGCCCGTCCGCATCTTGCACAAGTACTTGACGATCAAAATTTTGAAGAATTCGTAGATCCAAAGTTGGAGAAGAACTATGTTGCTAGCGAAATGTTTCGAATGATTGAAGCAGCAGCTGCATGTGTTCGTCACTCTGCCGTGAAAAGACCACGAATGAGTCAAGTGGTGAGAGCTTTAGACTGCTTAGATGAAATGTCAGATCTTGCAAATGGGGTAAAACCCGGGCAAAGTGGAGTGATTGATTCAGTTGAACATTCTGCTCAAATTAGAATGTTTCAAAGAATGGCTTTTGGTAGTCGGGAGTTCAGTACTGGTTATTTCGATCGAGATCGAAGTCAAAGCCAGAGCAGCTGGAGAAGTAGAGAATATGACGACGATCTGAGTTCTTCCGCGCCGTTTAATCTATCCGGATTATCAAATAAC | 2226 | 46.63 | SPSSPSGVPPTTSSPPPSPSVTSAPPSPATTSSPPSPSTSSLPPPSQTNQNTEPPSSVPPPQSPPASPPPSPPSSPPPSAPLPSSPPPPLLESPPPPSTLTSPPPSPPISQSPPPPPTSSLPSAPPSPPPLGSSSPPPPPPDLSPPPPSSDSPPPQSPPDTPPQNISPSSVPPPANNTTPTSSNFPPPPSQKSPEKSPPPPRRHSPPSPLSQSEPPAFSSSSPLLPDTPLPSIASSASPPSVSPTSPTNSSSSPTISPLPEKPTPEATPGSDVTANGSSGDGKQNSGPVVAIAVVVGFILLSLIIMGVWFVKRRKRRNKLKNIKYTLPSPFNSSQNSDSSFLRYRSPVALVGSRSGSDFMHSSTKAGGISNARGFIYEDLVQATNSFSAKNILGEGGFGCVYKGILSDGREVAVKQLKIGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEYQRLLVYDYVPNNTLHYHLHDYSALALGWATRVRIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDVNFEARVADFGLAKLALDSHTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLEIITGRKPVDSSQPLGDESLVEWARPHLAQVLDDQNFEEFVDPKLEKNYVASEMFRMIEAAAACVRHSAVKRPRMSQVVRALDCLDEMSDLANGVKPGQSGVIDSVEHSAQIRMFQRMAFGSREFSTGYFDRDRSQSQSSWRSREYDDDLSSSAPFNLSGLSNN | 742 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8979450 | 8983661 | + | Bpe024824 | Bpe11g01206 | 111351 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01206 | 742 | SMART | serkin_6 | 387 | 636 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g01206 | 742 | ProSiteProfiles | Protein kinase domain profile. | 387 | 663 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g01206 | 742 | SUPERFAMILY | Protein kinase-like (PK-like) | 363 | 660 | IPR011009 | - | |
Bpe11g01206 | 742 | MobiDBLite | consensus disorder prediction | 1 | 213 | - | - | |
Bpe11g01206 | 742 | MobiDBLite | consensus disorder prediction | 1 | 286 | - | - | |
Bpe11g01206 | 742 | Gene3D | Phosphorylase Kinase; domain 1 | 357 | 462 | - | - | |
Bpe11g01206 | 742 | MobiDBLite | consensus disorder prediction | 214 | 257 | - | - | |
Bpe11g01206 | 742 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 112 | 714 | - | - | |
Bpe11g01206 | 742 | Pfam | Protein tyrosine and serine/threonine kinase | 389 | 660 | IPR001245 | GO:0004672|GO:0006468 | |
Bpe11g01206 | 742 | CDD | STKc_IRAK | 393 | 661 | - | - | |
Bpe11g01206 | 742 | MobiDBLite | consensus disorder prediction | 713 | 742 | - | - | |
Bpe11g01206 | 742 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 507 | 519 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe11g01206 | 742 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 | 112 | 714 | - | - | |
Bpe11g01206 | 742 | MobiDBLite | consensus disorder prediction | 269 | 285 | - | - | |
Bpe11g01206 | 742 | MobiDBLite | consensus disorder prediction | 728 | 742 | - | - | |
Bpe11g01206 | 742 | ProSitePatterns | Protein kinases ATP-binding region signature. | 393 | 415 | IPR017441 | GO:0005524 | |
Bpe11g01206 | 742 | Gene3D | Transferase(Phosphotransferase) domain 1 | 463 | 675 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe10g00918 | Bpe-Chr10:14803184 | Bpe11g01206 | Bpe-Chr11:8979450 | 0 | dispersed | |
Bpe11g01206 | Bpe-Chr11:8979450 | Bpe11g01775 | Bpe-Chr11:14114177 | 1.29E-162 | dispersed | |
Bpe11g00030 | Bpe-Chr11:220895 | Bpe11g01206 | Bpe-Chr11:8979450 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63593 | PF07714 | PK_Tyr_Ser-Thr | 1.70E-45 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01206 | - | - | csv:101211665 | 692.96 |