Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01206 TCTCCGAGTTCTCCTTCTGGTGTTCCTCCGACCACTTCTTCACCTCCACCATCTCCGTCAGTTACTTCTGCACCTCCATCTCCGGCAACCACTTCTTCTCCTCCTTCTCCATCAACCTCTTCTTTACCTCCTCCATCTCAGACCAATCAAAATACCGAACCTCCTTCTTCAGTCCCACCTCCTCAGTCACCACCAGCTTCTCCCCCTCCATCTCCTCCATCATCACCCCCACCATCTGCGCCACTTCCTTCTTCGCCACCTCCACCGCTGCTTGAATCTCCCCCACCGCCATCTACTCTGACATCTCCGCCGCCATCACCTCCGATATCACAGTCTCCTCCGCCTCCTCCGACATCTTCACTTCCATCAGCGCCGCCATCACCTCCACCATTGGGTTCCAGTTCACCTCCTCCTCCTCCTCCAGACTTGTCACCACCACCTCCATCCAGCGATTCTCCGCCTCCTCAATCTCCACCTGATACTCCTCCTCAAAACATCTCACCTTCTTCTGTGCCTCCTCCAGCAAATAACACAACACCAACTTCCTCAAATTTTCCACCTCCACCATCACAAAAGTCTCCAGAAAAATCTCCTCCACCTCCTAGACGCCATTCGCCTCCTTCCCCTCTGTCCCAATCTGAACCTCCTGCTTTCTCCTCATCATCTCCATTATTGCCTGACACTCCTCTTCCTTCAATTGCCTCATCAGCTTCACCTCCTTCAGTTTCTCCTACTTCTCCAACTAATTCATCCAGCAGTCCTACTATTTCACCATTACCTGAGAAACCAACTCCAGAGGCAACTCCAGGAAGTGATGTCACGGCCAATGGTTCATCTGGTGATGGGAAACAAAATTCTGGCCCGGTAGTGGCAATTGCAGTTGTAGTTGGGTTCATATTACTCAGTCTCATCATCATGGGTGTATGGTTTGTGAAAAGACGGAAAAGAAGAAACAAATTGAAGAATATCAAGTACACTCTCCCTTCTCCTTTTAATTCCTCGCAAAATTCAGATTCTTCATTTCTTAGGTACCGTTCCCCAGTTGCCTTGGTGGGAAGCCGTTCAGGCAGCGATTTCATGCATTCATCAACCAAGGCCGGTGGAATAAGCAATGCAAGAGGGTTCATATATGAGGACCTAGTCCAAGCTACAAATTCTTTTTCAGCCAAAAATATTTTGGGTGAAGGTGGATTTGGTTGTGTTTACAAAGGCATCCTCTCAGATGGAAGAGAAGTAGCAGTAAAGCAACTGAAAATTGGCGGTGGCCAAGGTGAACGTGAATTTAGAGCCGAGGTTGAGATTATTAGTCGAGTCCACCATCGCCATCTGGTTTCTCTTGTTGGTTATTGTATATCTGAATATCAGAGATTGCTTGTATATGATTATGTTCCAAACAATACTCTGCATTATCATCTCCATGATTATAGTGCATTGGCTCTGGGTTGGGCAACGCGTGTTAGAATTGCCGCTGGCGCTGCTCGGGGGATTGCTTACCTACATGAAGACTGCCATCCACGCATCATTCACAGGGATATTAAGTCTTCAAACATCCTGCTCGATGTCAACTTTGAAGCTCGGGTTGCAGATTTTGGGCTCGCAAAGTTAGCTCTAGATTCGCATACACATGTTACTACTCGTGTTATGGGAACATTTGGCTACATGGCTCCGGAATATGCAACAAGTGGAAAACTGACTGATAAATCTGATGTTTTCTCATTTGGAGTTGTGCTTTTGGAGATAATTACTGGTCGAAAACCCGTAGATTCCTCTCAGCCATTAGGGGATGAGAGCCTAGTTGAATGGGCCCGTCCGCATCTTGCACAAGTACTTGACGATCAAAATTTTGAAGAATTCGTAGATCCAAAGTTGGAGAAGAACTATGTTGCTAGCGAAATGTTTCGAATGATTGAAGCAGCAGCTGCATGTGTTCGTCACTCTGCCGTGAAAAGACCACGAATGAGTCAAGTGGTGAGAGCTTTAGACTGCTTAGATGAAATGTCAGATCTTGCAAATGGGGTAAAACCCGGGCAAAGTGGAGTGATTGATTCAGTTGAACATTCTGCTCAAATTAGAATGTTTCAAAGAATGGCTTTTGGTAGTCGGGAGTTCAGTACTGGTTATTTCGATCGAGATCGAAGTCAAAGCCAGAGCAGCTGGAGAAGTAGAGAATATGACGACGATCTGAGTTCTTCCGCGCCGTTTAATCTATCCGGATTATCAAATAAC 2226 46.63 SPSSPSGVPPTTSSPPPSPSVTSAPPSPATTSSPPSPSTSSLPPPSQTNQNTEPPSSVPPPQSPPASPPPSPPSSPPPSAPLPSSPPPPLLESPPPPSTLTSPPPSPPISQSPPPPPTSSLPSAPPSPPPLGSSSPPPPPPDLSPPPPSSDSPPPQSPPDTPPQNISPSSVPPPANNTTPTSSNFPPPPSQKSPEKSPPPPRRHSPPSPLSQSEPPAFSSSSPLLPDTPLPSIASSASPPSVSPTSPTNSSSSPTISPLPEKPTPEATPGSDVTANGSSGDGKQNSGPVVAIAVVVGFILLSLIIMGVWFVKRRKRRNKLKNIKYTLPSPFNSSQNSDSSFLRYRSPVALVGSRSGSDFMHSSTKAGGISNARGFIYEDLVQATNSFSAKNILGEGGFGCVYKGILSDGREVAVKQLKIGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEYQRLLVYDYVPNNTLHYHLHDYSALALGWATRVRIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDVNFEARVADFGLAKLALDSHTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLEIITGRKPVDSSQPLGDESLVEWARPHLAQVLDDQNFEEFVDPKLEKNYVASEMFRMIEAAAACVRHSAVKRPRMSQVVRALDCLDEMSDLANGVKPGQSGVIDSVEHSAQIRMFQRMAFGSREFSTGYFDRDRSQSQSSWRSREYDDDLSSSAPFNLSGLSNN 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8979450 8983661 + Bpe024824 Bpe11g01206 111351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01206 742 SMART serkin_6 387 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01206 742 ProSiteProfiles Protein kinase domain profile. 387 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01206 742 SUPERFAMILY Protein kinase-like (PK-like) 363 660 IPR011009 -
Bpe11g01206 742 MobiDBLite consensus disorder prediction 1 213 - -
Bpe11g01206 742 MobiDBLite consensus disorder prediction 1 286 - -
Bpe11g01206 742 Gene3D Phosphorylase Kinase; domain 1 357 462 - -
Bpe11g01206 742 MobiDBLite consensus disorder prediction 214 257 - -
Bpe11g01206 742 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 112 714 - -
Bpe11g01206 742 Pfam Protein tyrosine and serine/threonine kinase 389 660 IPR001245 GO:0004672|GO:0006468
Bpe11g01206 742 CDD STKc_IRAK 393 661 - -
Bpe11g01206 742 MobiDBLite consensus disorder prediction 713 742 - -
Bpe11g01206 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
Bpe11g01206 742 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 112 714 - -
Bpe11g01206 742 MobiDBLite consensus disorder prediction 269 285 - -
Bpe11g01206 742 MobiDBLite consensus disorder prediction 728 742 - -
Bpe11g01206 742 ProSitePatterns Protein kinases ATP-binding region signature. 393 415 IPR017441 GO:0005524
Bpe11g01206 742 Gene3D Transferase(Phosphotransferase) domain 1 463 675 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00918 Bpe-Chr10:14803184 Bpe11g01206 Bpe-Chr11:8979450 0 dispersed
Bpe11g01206 Bpe-Chr11:8979450 Bpe11g01775 Bpe-Chr11:14114177 1.29E-162 dispersed
Bpe11g00030 Bpe-Chr11:220895 Bpe11g01206 Bpe-Chr11:8979450 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63593 PF07714 PK_Tyr_Ser-Thr 1.70E-45 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01206 - - csv:101211665 692.96