Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01227 ATGGCACTGGCCAAAGAACCACGCATGGGCTTAGTTCAAACTCCAGACCTTTCTTCCCAAATCTCTTATGAAATTGCACCAGAAATGGGAAAATTTGGTGGGTTTGCAAAGAATACTGGTTTTTTGTTCTGCAGTTCAAACTATCAACCTGATGTTTCTCACTCTGTAATAAACTTCAAGAACCAGCTTGATCAGAATCTAATCCATTTAAACACTGATTCATCTTTACTGAGTTTTGGTCAAACCCAACAATTAGCTCAAGATGATTATTTCAACTGGCCAGCAGAGGGAGAGAGCTTTGTCAATGGCTGTCAATGGAGTCAGATGATCAGTTCTCCTAGCTTACGCCTTTTGCAAGATTTGAACTGCTTCCAAAAAGCTTCTAACTTTAGTCACGTCGACAATCCTTCGAAAGAGAAGCAAAATGGATCACATGGGTCTGGAAACCATTGGCTTTATTCTGAAGAATCGGATGTTATTGTTGAAGAAGAATCAAGAACAGCTCATGAACAAAACCTCCATAAACGGCCCCATTTGATGGATAGCGAGCAATCAATGAAGAAACAGTGCAATAATTCACCGAAGAAGACAACGCCAAAGACCAGTCCATCAAAGGATCCGCAAAGTATAGCAGCAAAGAATCGACGAGAGCGAATTAGCGATCGATTGAAGACTCTTCAAGAACTAGTACCCAATGGCTCCAAGGTTGATTTGGTGACTATGCTGGACAAAGCAATTAGCTACGTCAAATTCCTGCAACTTCAAGTCAAGATTCTGGGTACAGATGAATTTTGGCCAGTTCAAGGAGGGAAAGCTCCTGATATTTCTCAAGTGAGGGAAGCCATTGATGTCATTCTTTCTTCTCAGAGAGACAGAAGCTCGAGCTCAAACAGCGCAATGCTTAGCAATGAAAGTTAA 918 41.39 MALAKEPRMGLVQTPDLSSQISYEIAPEMGKFGGFAKNTGFLFCSSNYQPDVSHSVINFKNQLDQNLIHLNTDSSLLSFGQTQQLAQDDYFNWPAEGESFVNGCQWSQMISSPSLRLLQDLNCFQKASNFSHVDNPSKEKQNGSHGSGNHWLYSEESDVIVEEESRTAHEQNLHKRPHLMDSEQSMKKQCNNSPKKTTPKTSPSKDPQSIAAKNRRERISDRLKTLQELVPNGSKVDLVTMLDKAISYVKFLQLQVKILGTDEFWPVQGGKAPDISQVREAIDVILSSQRDRSSSSNSAMLSNES 305
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 9172418 9173816 + Bpe004554.1 Bpe11g01227 111372
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01227 305 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 48 288 - -
Bpe11g01227 305 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 203 260 IPR036638 GO:0046983
Bpe11g01227 305 MobiDBLite consensus disorder prediction 162 216 - -
Bpe11g01227 305 Gene3D - 198 259 IPR036638 GO:0046983
Bpe11g01227 305 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 203 252 IPR011598 GO:0046983
Bpe11g01227 305 MobiDBLite consensus disorder prediction 162 183 - -
Bpe11g01227 305 SMART finulus 209 258 IPR011598 GO:0046983
Bpe11g01227 305 MobiDBLite consensus disorder prediction 184 209 - -
Bpe11g01227 305 Pfam Helix-loop-helix DNA-binding domain 210 253 IPR011598 GO:0046983
Bpe11g01227 305 MobiDBLite consensus disorder prediction 130 150 - -
Bpe11g01227 305 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 48 288 - -
Bpe11g01227 305 CDD bHLH_AtIND_like 204 266 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00010 Bpe-Chr11:75226 Bpe11g01227 Bpe-Chr11:9172418 1.19E-157 dispersed
Bpe11g01227 Bpe-Chr11:9172418 Bpe01g00640 Bpe-Chr1:4315263 1.11E-17 dispersed
Bpe11g01227 Bpe-Chr11:9172418 Bpe02g01776 Bpe-Chr2:20088959 1.69E-24 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22090 PF00010 HLH 9.60E-08 No_clan Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01227 - - rcu:8262354 241.121