Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01233 | ATGATTGCAGGAGGCGAGAAGAAGTGCTTAAATTCAGAGCTTTGGCATGCATGCGCAGGGCCCCTCGTGTCTCTCCCAACGGGTGGGACTCGTGTCGTCTACTTTCCTCAGGGTCACAGTGAGCAGGTTGCTGCCACGACCAACAAAGAAGTTGATGGGCACATACCCAATTATCCAAACTTACCGCCCCAGCTCATATGTCAGCTTCATAATGTCACAATGCATGCAGACGTGGAAACTGATGAAGTATATGCGCAAATGACATTACAGCCGTTGACACCCCAAGAGCAGAAGGATACATTTCTTCCTATGGAGTTGGGGATCCCAAGCAAACAGCCCACCAACTATTTTTGCAAGACATTGACAGCAAGTGACACAAGCACTCATGGAGGTTTCTCTGTTCCTCGGCGTGCCGCCGAAAAAGTTTTTCCCCCTCTGGATTTTTCACAACAACCCCCCGCGCAAGAACTTAAAGCAAGAGACCTGCATGATGTTGAGTGGAAATTTAGGCACATTTTTCGAGGTCAGCCAAAACGTCATCTTCTTACAACTGGATGGAGCGTGTTTGTTAGTGCTAAAAGACTTGTTGCAGGAGATTCAGTTCTCTTTATCTGGAATGAAAAAAATCAGCTGCTATTGGGCATTCGTCGTGCCACGCGACCTCAAACTGTGATGCCATCATCTGTTCTCTCAAGTGACAGTATGCATATAGGACTTCTTGCTGCCGCGGCTCATGCTGCTGCAACAAATAGCTGTTTCACAGTTTTTTATAACCCTAGGGCTAGTCCATCTGAGTTTGTTATTCCTCTTTCAAAATATGTTAAAGCAGTATTTCATACACGTGTTTCAGTGGGGATGCGCTTTCGAATGCTGTTTGAGACAGAAGAATCAAGTGTTCGAAGGTACATGGGTACAATTACAGGGATAAGTGACCTAGATCCTGTTCGTTGGCCTAATTCCCATTGGCGTTCTGTCAAGGTTGGTTGGGATGAATCGACTGCCGGTGATAGACAACCAAGAGTATCTTTGTGGGAAATTGAGCCATTGACAACGTTTCCCATGTATCCTTCTCTTTTTCCACTCAGACTAAAACGTCCATGGCATCCTGGGGCGTCATCATTGCTGGATTCCAGAGACGATGCAGCTAATGGGCTCATGTGGCTAAGAGGGGGAACAGGGGAACAAGGTCTACAATCTCTCAATTTTCAGTCTGTTGGTATGTTTCCCTGGTTGCAGCAAAGACTTGACTCGCCATTGCTTGTATCGGATCATAATCAGCCTTACCAGACCATGCTGGCAGCTGGTATGCAGAACCTTGGAAGTGGAGATCTTCTAAGACAGCAAATGATCCACCTTCAACAGTCTTTCCAGTATCTTCAGCAGCCTAATAGTCATAATTCGCTTATGCAAATGCCACAGCAATCGCAGCAGCAGATGGGTCAACAATCCGTGCTTCCTAGTGCCCTGCAGTCACAATCACAACCATTGGCAGAGAATTTACCCCAGCACTTCTTGCAGCAAGCATTAAATAATCAATCTGAGCAACAGCCAAATCAGCAATCACACTCTTATCATCCGGCTCTTCAGGCGCAGAGCACCCAGCTTCATCAAGGTCAGCAATCAAATGTGCCTTCGCCAACATTTCCTGGAACAGACTTTATGGATTCGAGCACCAAATTCGCTGCTTCCATGTCCCCAAGGCAAAACGTGCTTGGTTCATCATGTCCCGATACTGGTGGCAGTTTCTCACACTTGTATCGAAGTCAGTCTGGGATATCAGAGCACTCATCCCATCAATCATCAACTTCCAAGTATGGTCATTCTCATGTCAATGTTCAAACTACTTTTGCTTCATTTCCTGGGAGAGACTCTATGGTGGAGCTGAGGAATTGTAACTCGGAGTCACCCAATCCCATTGTTTTTGGTGTGAATATTGATTCCTCTGGGCTTCTACTTCCCAGTGTCCCGAATTTCGCCTCTCATTCTATTGATGCTGATTCCTCCACCATGCCATTAGGGGATTCTGGATTTCAAAGTTCCCTATATGGTTGTGTCCAAGACTCTTCTGAGCTATTACGCAGTTCGGAGCAAGTTGATCCACCAACACCCACCCAGACATTCGTGAAGGTTTACAAGTCGGGATCAGTTGGACGCTCTCTTGACATCTCCCGGTTCAACAGCTACCATGAGTTGCGGGAGGAGTTGGCTCAAATGTTTGGCATTGAGGGAAAGTTGGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGTGCTTCTCCTTGGAGATGACCCGTGGGAGGCATTTGTGAACAACGTTTGGTATATCAAGATACTTTCACCTGAAGATTTTCAGAAAATGGGGGAGCAGGCGATTGAATCATTCGGCACAACTATAGGTCAGCGCCCGAATAGTAGCGGTGGGGAAGCTCACTCTGGGTTTCCATCTCTCGGCCCCCTGGAATACTAA | 2487 | 46.84 | MIAGGEKKCLNSELWHACAGPLVSLPTGGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELKARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGASSLLDSRDDAANGLMWLRGGTGEQGLQSLNFQSVGMFPWLQQRLDSPLLVSDHNQPYQTMLAAGMQNLGSGDLLRQQMIHLQQSFQYLQQPNSHNSLMQMPQQSQQQMGQQSVLPSALQSQSQPLAENLPQHFLQQALNNQSEQQPNQQSHSYHPALQAQSTQLHQGQQSNVPSPTFPGTDFMDSSTKFAASMSPRQNVLGSSCPDTGGSFSHLYRSQSGISEHSSHQSSTSKYGHSHVNVQTTFASFPGRDSMVELRNCNSESPNPIVFGVNIDSSGLLLPSVPNFASHSIDADSSTMPLGDSGFQSSLYGCVQDSSELLRSSEQVDPPTPTQTFVKVYKSGSVGRSLDISRFNSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVNNVWYIKILSPEDFQKMGEQAIESFGTTIGQRPNSSGGEAHSGFPSLGPLEY | 828 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9210760 | 9218631 | - | Bpe004560.1 | Bpe11g01233 | 111378 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01233 | 828 | SUPERFAMILY | DNA-binding pseudobarrel domain | 101 | 246 | IPR015300 | - | |
Bpe11g01233 | 828 | MobiDBLite | consensus disorder prediction | 585 | 607 | - | - | |
Bpe11g01233 | 828 | PANTHER | AUXIN RESPONSE FACTOR 8 | 4 | 805 | - | - | |
Bpe11g01233 | 828 | MobiDBLite | consensus disorder prediction | 803 | 828 | - | - | |
Bpe11g01233 | 828 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 4 | 805 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Bpe11g01233 | 828 | Pfam | Auxin response factor | 243 | 326 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Bpe11g01233 | 828 | CDD | B3_DNA | 116 | 217 | IPR003340 | GO:0003677 | |
Bpe11g01233 | 828 | SUPERFAMILY | CAD & PB1 domains | 697 | 779 | - | - | |
Bpe11g01233 | 828 | Pfam | AUX/IAA family | 702 | 788 | IPR033389 | - | |
Bpe11g01233 | 828 | Gene3D | - | 115 | 219 | IPR015300 | - | |
Bpe11g01233 | 828 | Gene3D | - | 702 | 794 | - | - | |
Bpe11g01233 | 828 | Pfam | B3 DNA binding domain | 117 | 218 | IPR003340 | GO:0003677 | |
Bpe11g01233 | 828 | MobiDBLite | consensus disorder prediction | 468 | 494 | - | - | |
Bpe11g01233 | 828 | MobiDBLite | consensus disorder prediction | 510 | 557 | - | - | |
Bpe11g01233 | 828 | MobiDBLite | consensus disorder prediction | 803 | 817 | - | - | |
Bpe11g01233 | 828 | Gene3D | - | 281 | 353 | - | - | |
Bpe11g01233 | 828 | ProSiteProfiles | B3 DNA-binding domain profile. | 117 | 219 | IPR003340 | GO:0003677 | |
Bpe11g01233 | 828 | ProSiteProfiles | PB1 domain profile. | 705 | 789 | IPR000270 | GO:0005515 | |
Bpe11g01233 | 828 | SMART | B3_2 | 117 | 219 | IPR003340 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00841 | Bpe-Chr1:15864973 | Bpe11g01233 | Bpe-Chr11:9210760 | 0 | dispersed | |
Bpe04g00699 | Bpe-Chr4:4494819 | Bpe11g01233 | Bpe-Chr11:9210760 | 2.80E-78 | dispersed | |
Bpe08g00399 | Bpe-Chr8:2446058 | Bpe11g01233 | Bpe-Chr11:9210760 | 4.18E-94 | dispersed | |
Bpe08g00725 | Bpe-Chr8:8707143 | Bpe11g01233 | Bpe-Chr11:9210760 | 2.99E-31 | dispersed | |
Bpe11g01082 | Bpe-Chr11:8124146 | Bpe11g01233 | Bpe-Chr11:9210760 | 0 | dispersed | |
Bpe11g01233 | Bpe-Chr11:9210760 | Bpe13g01112 | Bpe-Chr13:16729661 | 5.25E-29 | dispersed | |
Bpe04g00237 | Bpe-Chr4:1599492 | Bpe11g01233 | Bpe-Chr11:9210760 | 2.52E-28 | transposed | |
Bpe11g01233 | Bpe-Chr11:9210760 | Bpe09g00705 | Bpe-Chr9:15634957 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22091 | PF02309 | AUX_IAA | 7.80E-08 | CL0072 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01233 | - | - | csv:101208098 | 1315.06 |