Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01239 ATGGTGGTTAAAGTATATGGTTCGGTGAGATCAGCCTGCTCGCAGAGGGTTCTAGCCTGCCTTTTGGAGAAAGAGGTGGAGTTTGAGATTGTTCATGTTGATCTCGACGCTGCTGAGCATAAGAAACCTGAGTTTCTTCTTCTGCAACCATTTGGACAAGTTCCTGTCATAGAAGATGGCGACCTCAGGCTTTTTGAATCGAGGGCGATCGTCAGATACTATGCAGCAAAATACCCGGATAGGGGAACCAACCTACTTGGAAAGAGCTTGGAAGAGAGAGCTCTAGTGGATCAATGGCTAGAAGTGGAAGCACAAAACTTCAACGACCTCGTTTACAACATTGTACTTCAACTCCTCATCTTCCCGCGAATGGGGAAACGCACCGACGCGGCACTGGTCCGATCTTGCGAGCAAAAACTCGAGATCGTGCTAGACATCTACAACAAAAGACTCTCTCAAAGCCGGTATCTCGCTGGAGACTCATTCACTTTGGCTGATATGAGCCATCTGCCTGGAATTCGGTATTTAGTAGAGGAGGCCGGATTGAGCGACATGGTGAGCAAGAGAAGCAATGTGAACGCTTGGTGGGAGGATATTTCAAACAGGGCAGCTTGGAAAAAGTTGATGAATATTGCTTTTCATTAG 645 47.13 MVVKVYGSVRSACSQRVLACLLEKEVEFEIVHVDLDAAEHKKPEFLLLQPFGQVPVIEDGDLRLFESRAIVRYYAAKYPDRGTNLLGKSLEERALVDQWLEVEAQNFNDLVYNIVLQLLIFPRMGKRTDAALVRSCEQKLEIVLDIYNKRLSQSRYLAGDSFTLADMSHLPGIRYLVEEAGLSDMVSKRSNVNAWWEDISNRAAWKKLMNIAFH 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9239967 9241167 - Bpe004566.1 Bpe11g01239 111384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01239 214 Pfam Glutathione S-transferase, N-terminal domain 1 73 IPR004045 -
Bpe11g01239 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 214 IPR010987 -
Bpe11g01239 214 SUPERFAMILY GST C-terminal domain-like 81 210 IPR036282 -
Bpe11g01239 214 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Bpe11g01239 214 SFLD Main (cytGST) 1 210 - -
Bpe11g01239 214 Pfam Glutathione S-transferase, C-terminal domain 115 202 IPR004046 -
Bpe11g01239 214 SFLD Main.5: Phi-like 1 210 - -
Bpe11g01239 214 Gene3D Glutaredoxin 2 86 - -
Bpe11g01239 214 Gene3D - 87 209 - -
Bpe11g01239 214 PANTHER GLUTATHIONE S-TRANSFERASE F12 2 212 - -
Bpe11g01239 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 212 - -
Bpe11g01239 214 CDD GST_C_Phi 91 209 IPR034347 -
Bpe11g01239 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Bpe11g01239 214 CDD GST_N_Phi 2 77 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00640 Bpe-Chr5:20225130 Bpe11g01239 Bpe-Chr11:9239967 2.12E-12 dispersed
Bpe05g00738 Bpe-Chr5:20840689 Bpe11g01239 Bpe-Chr11:9239967 9.72E-12 dispersed
Bpe06g00513 Bpe-Chr6:16308344 Bpe11g01239 Bpe-Chr11:9239967 3.48E-54 dispersed
Bpe06g00515 Bpe-Chr6:16310763 Bpe11g01239 Bpe-Chr11:9239967 2.76E-57 dispersed
Bpe11g01239 Bpe-Chr11:9239967 Bpe11g01706 Bpe-Chr11:13332090 1.08E-11 dispersed
Bpe11g01239 Bpe-Chr11:9239967 Bpe07g00034 Bpe-Chr7:301506 2.06E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01239 K00799 - twl:119987230 333.954