Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01266 | ATGGCTTCTATGAACTGGCTTGGTTTCTCTCTTTCTCCCCAGGAGTTTTCTTCTCAAGCAGGTGAAGATCATTCTGCCCAAAGCTCGGTTTCACGCCTCGGATTCGACTCCGATGAAATCGCCGGCCATGTCTCCGGCGACTGCTTCGATCACTCTTCTACTCCCTCTCTTATTCTCCCTCCTCCTTTTGAACTTCTTGAATCTTACAACCATCGCCCCAACCAATCTCAAGATTGGAACTTTAAGAGTACGGCGATGAACTCTGACAACAACTACAAAGAAAACTCGTCAGAACTTTCAATTTTAATGGCTACCACTTCATGCAGCAGCCGAAACATCGAAACCCATCATCAACCGAAGCTCGAAAACTTTCTGGGCCGCGAAAACCCAAACTCCTTCATATACGCAGCAAATGCGGCTATCGGAGATGGAGGTGACGCTGGAGCTAATGGCAGTAGTGTTAATAGTAGCTCTATTGGGTTGTCAATGATAAAGACATGGCTAAGAAGCCAACCAACACATTCCATTGCGGAGAATAAGAACGATGATGGCGGATCAAAAACCAGAAATGCACAAAGTTTGTCACTTTCTATGAGCACTGGTTCTAGTTCGCCATTGCTCCAAACTAGCTCTGCCGGAGGAAATGGCGGTGGGGAGAGTTCTTCGTCGGAGAATAAGCAAATTAAGACTTCATCCGGTATGGATGCCAAAAATGGCGCCATTGAAGGTGTGCCAAGAAAGTCCATCGATACATTTGGACAAAGAACTTCTATTTATCGTGGCGTAACAAGGCATAGATGGACGGGTAGATACGAGGCTCATCTGTGGGACAACAGTTGCAGAAGAGAAGGACAAACTAGGAAAGGAAGACAAGGAGGTTATGATAAAGAAGATAAAGCAGCAAGAGCCTATGATTTAGCAGCACTTAAATATTGGGGTACCACTACTACTACAAATTTCCCAATTAGCAGCTACGAAAAAGAATTAGAAGAAATGAAGCACGTGACGAGACAAGAATACGTTGCATCTCTTAGAAGGAAGAGTAGTGGGTTTTCTCGAGGAGCTTCGATTTATCGTGGAGTAACGAGACACCATCAACATGGAAGATGGCAAGCAAGGATTGGAAGAGTCGCAGGAAACAAAGACCTATATTTAGGAACTTTCAGCACTCAAGAGGAAGCTGCAGAGGCTTACGACATTGCAGCCATAAAGTTCAGGGGGCTAAATGCTGTGACAAACTTTGATATGAACAGATATGATGTAAAATCAATCTTAGAAAGCAGTACTCTCCCCATTGGAGGAGCCTCGAAGAGATTGAAAGATGTTGATCAAGCGGAGATAATGTCCGTCGACGGACTAAGAACCGACGAAGAATCCATTTCTCAACTCACCGACCACGGAATGGGCGGCTACGGCAGCTTGAACCACCATGCCTGGCTGGGTTTTTCCTTCCAACAAGCTCGGTTTCAGCCCTACAATGGCTTCCACCACCCCTATGGTCAAAGGGGTTGGTGTAAGCAAGAGCAAGACTCCGAGGTGGTGTCCCATGGCTTCCATGATCTTCACCAGCTTCATACTGGAAACACCCACAATTTCTTTCAGCATAATCCTTCTCTGCATAATCTGACAGCGATGGATTCTTCCTCGATGGAGCATAGTTCTGGTTCTAACTCCATTCTTTACAGCAATGGAGGCGGAGGAGACGGAGGAAATAACAACAGTAATGGCGGAGCTATCGGATATGGAAGCTGCAACAATGGCAGCGGATATGGGATTCCGGTCGGAACAACGATAATTTCAAATGATCATGAAAATGGCGGTGGAGGGTACGAGAATCTTTTTGGAAATTCAGTGGATCCTTATCAGGGAAGGAACTTGTATTGTCTGTCGCAACAATCACCAGTATCAACGGCTGTGATTAAACCTAGCGCATATGATCAAGGGTCAGAGTGCAACAACTGGGTCCCAACTGCAGTTCCAACCCTAGCTCCGAGGTCTACCAACAATAACATGGCTGTGTGTCATGGAACTCCAGCTTTCACCATTTGGAATGACTCCTAG | 2061 | 45.9 | MASMNWLGFSLSPQEFSSQAGEDHSAQSSVSRLGFDSDEIAGHVSGDCFDHSSTPSLILPPPFELLESYNHRPNQSQDWNFKSTAMNSDNNYKENSSELSILMATTSCSSRNIETHHQPKLENFLGRENPNSFIYAANAAIGDGGDAGANGSSVNSSSIGLSMIKTWLRSQPTHSIAENKNDDGGSKTRNAQSLSLSMSTGSSSPLLQTSSAGGNGGGESSSSENKQIKTSSGMDAKNGAIEGVPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGGYDKEDKAARAYDLAALKYWGTTTTTNFPISSYEKELEEMKHVTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESSTLPIGGASKRLKDVDQAEIMSVDGLRTDEESISQLTDHGMGGYGSLNHHAWLGFSFQQARFQPYNGFHHPYGQRGWCKQEQDSEVVSHGFHDLHQLHTGNTHNFFQHNPSLHNLTAMDSSSMEHSSGSNSILYSNGGGGDGGNNNSNGGAIGYGSCNNGSGYGIPVGTTIISNDHENGGGGYENLFGNSVDPYQGRNLYCLSQQSPVSTAVIKPSAYDQGSECNNWVPTAVPTLAPRSTNNNMAVCHGTPAFTIWNDS | 686 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9463537 | 9467736 | - | Bpe004596.1 | Bpe11g01266 | 111411 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01266 | 686 | Pfam | AP2 domain | 258 | 313 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01266 | 686 | Pfam | AP2 domain | 357 | 407 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01266 | 686 | SUPERFAMILY | DNA-binding domain | 356 | 416 | IPR016177 | GO:0003677 | |
Bpe11g01266 | 686 | SMART | rav1_2 | 357 | 421 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01266 | 686 | SMART | rav1_2 | 258 | 327 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01266 | 686 | MobiDBLite | consensus disorder prediction | 186 | 234 | - | - | |
Bpe11g01266 | 686 | SUPERFAMILY | DNA-binding domain | 257 | 323 | IPR016177 | GO:0003677 | |
Bpe11g01266 | 686 | CDD | AP2 | 257 | 323 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01266 | 686 | ProSiteProfiles | AP2/ERF domain profile. | 357 | 415 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01266 | 686 | MobiDBLite | consensus disorder prediction | 175 | 248 | - | - | |
Bpe11g01266 | 686 | ProSiteProfiles | AP2/ERF domain profile. | 258 | 321 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01266 | 686 | PANTHER | BNAC02G44180D PROTEIN | 5 | 684 | - | - | |
Bpe11g01266 | 686 | PRINTS | Ethylene responsive element binding protein signature | 397 | 417 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01266 | 686 | PRINTS | Ethylene responsive element binding protein signature | 259 | 270 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01266 | 686 | CDD | AP2 | 356 | 415 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01266 | 686 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 5 | 684 | - | - | |
Bpe11g01266 | 686 | Gene3D | AP2/ERF domain | 258 | 323 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe11g01266 | 686 | Gene3D | AP2/ERF domain | 357 | 417 | IPR036955 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00465 | Bpe-Chr2:3022571 | Bpe11g01266 | Bpe-Chr11:9463537 | 2.76E-89 | dispersed | |
Bpe04g00142 | Bpe-Chr4:956633 | Bpe11g01266 | Bpe-Chr11:9463537 | 1.25E-106 | dispersed | |
Bpe08g00699 | Bpe-Chr8:8144067 | Bpe11g01266 | Bpe-Chr11:9463537 | 2.34E-08 | dispersed | |
Bpe10g00016 | Bpe-Chr10:280149 | Bpe11g01266 | Bpe-Chr11:9463537 | 1.75E-08 | dispersed | |
Bpe11g00910 | Bpe-Chr11:6744803 | Bpe11g01266 | Bpe-Chr11:9463537 | 1.05E-123 | dispersed | |
Bpe11g01266 | Bpe-Chr11:9463537 | Bpe15g00266 | Bpe-Chr15:14018552 | 1.59E-88 | dispersed | |
Bpe13g00463 | Bpe-Chr13:12161863 | Bpe11g01266 | Bpe-Chr11:9463537 | 1.25E-06 | dispersed | |
Bpe11g01266 | Bpe-Chr11:9463537 | Bpe08g01222 | Bpe-Chr8:13820585 | 3.16E-128 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22093 | PF00847 | AP2 | 2.30E-08 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01266 | K09285 | - | qsu:111984882 | 842.417 |