Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01273 ATGGGGTCCTGCCTTTCCACAGAAAGCAGGAGCCCTATTCCTGGATCACCAAATTCTCCGGCAGGGAGAGCTAAGAAGAGAAAATCGTCGAAGAAACGATTAAGATCACGTGGTTCTTCGTTTGACTGTGGAAGGGAAGAACCTTTGCATCGAATCCCTGGGAGGATGTTCTTGAATGGGTCTAGTGAAGTTGCTTCTTTGTTCACTCAACAGGGTAGGAAAGGAACAAACCAAGATGCCATGATTGTTTGGGAGAATTTCGGTTCAAGAAGTGACACGATCTTCTGTGGCGTGTTTGATGGGCACGGACCGTTCGGCCATATGGTTGCTAAGAGAGTGAGGGATTCTCTTCCTCTGAAAGTGAAAGCCCAGTGGGAATTCAATGCAGTGACTGAAGAAGTTGTCCGAGAACTCAGTGCCGATCCTAATGGAGAAACAAACAGAGATGACGATGAAGGAGGGACTAGAGTCTCCATTGACATTGCCGAGTCGGAGAAGCCAAAAGCAATTTTTCAAACATTGAAGGAATCATTTCTAAAGGCCTCTAAAGTGATGGACAGAGAATTGAGGATGCAGCCAAGTATCGATTGTTTCTGTAGCGGCACTACTGCCGTGACTTTGGTTAAGCAGGGAGAAAACCTTGTGATTGGAAATGTTGGAGATTCCAGAGCTGTAATGGCTACAAGAGATAAAGATGACACCCTTGTTGCCATTCAGTTGACCGTTGATCTGAAGCCGAATCTTCCGGGGGAAGAAGAGAGAATTCGCAGCTGTAAAGGCCGGGTCTTTGCTCTTGAAGATGAACCTGAGGTTGCCAGAGTATGGCTGCCGAACAGCGACTCCCCCGGCCTTGCTATGGCTCGTGCATTTGGAGATTTTTGTCTCAAGGATTTCGGTCTAATATCTGTACCCGAAATTACCTGCCGACAACTAACTGAAAAGGATGAATTTGTCGTCATGGCGACGGATGGGATATGGGACGTTTTATCAAATTCAGAAGTAGTGGATATTGTAGCATCGGCCCAGTCTCGGTCAACCGCAGCTCGAGCTCTTGTAGAGGCAGCCGTTCAAGGATGGCAATGTAAATATCCTACTTCCAAAGTCGATGATTGTGCTGTCGTGTGCCTATTCGTTGATTCGAACTCAAACAATCTATCGATGGCCTCGAATGCCAAATCCAAAGACTGTCTTTCCTCTGAGGCTCGAATTTGCAATGGCGATGCTGCCATTAACAAGGACCTCTCTACGCCTAGGGATCTAAATCGCTTGGTCACAGTACGAATGGTCAAAGACATTCTGGGTGAAAAGGAAGAAGAAGACTACGAGAATATGGCCAGGACTAGAAGTAAGTGGTTGGCCCTAGAAGGCGTGTCAAGAGTAAACTCGTTATTGACTTTGCCGAGATTTGTTCCGTCAAAGAAGGAGAAGGCCCGATGA 1437 46.83 MGSCLSTESRSPIPGSPNSPAGRAKKRKSSKKRLRSRGSSFDCGREEPLHRIPGRMFLNGSSEVASLFTQQGRKGTNQDAMIVWENFGSRSDTIFCGVFDGHGPFGHMVAKRVRDSLPLKVKAQWEFNAVTEEVVRELSADPNGETNRDDDEGGTRVSIDIAESEKPKAIFQTLKESFLKASKVMDRELRMQPSIDCFCSGTTAVTLVKQGENLVIGNVGDSRAVMATRDKDDTLVAIQLTVDLKPNLPGEEERIRSCKGRVFALEDEPEVARVWLPNSDSPGLAMARAFGDFCLKDFGLISVPEITCRQLTEKDEFVVMATDGIWDVLSNSEVVDIVASAQSRSTAARALVEAAVQGWQCKYPTSKVDDCAVVCLFVDSNSNNLSMASNAKSKDCLSSEARICNGDAAINKDLSTPRDLNRLVTVRMVKDILGEKEEEDYENMARTRSKWLALEGVSRVNSLLTLPRFVPSKKEKAR 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9532508 9534895 - Bpe004603.1 Bpe11g01273 111418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01273 478 MobiDBLite consensus disorder prediction 137 156 - -
Bpe11g01273 478 SUPERFAMILY PP2C-like 62 379 IPR036457 -
Bpe11g01273 478 MobiDBLite consensus disorder prediction 1 47 - -
Bpe11g01273 478 SMART PP2C_4 53 376 IPR001932 -
Bpe11g01273 478 MobiDBLite consensus disorder prediction 1 16 - -
Bpe11g01273 478 CDD PP2Cc 64 378 IPR001932 -
Bpe11g01273 478 ProSiteProfiles PPM-type phosphatase domain profile. 64 378 IPR001932 -
Bpe11g01273 478 PANTHER ALPHABET, ISOFORM E-RELATED 1 463 - -
Bpe11g01273 478 Pfam Protein phosphatase 2C 70 356 IPR001932 -
Bpe11g01273 478 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 463 - -
Bpe11g01273 478 Gene3D - 59 379 IPR036457 -
Bpe11g01273 478 MobiDBLite consensus disorder prediction 138 156 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00548 Bpe-Chr1:3552891 Bpe11g01273 Bpe-Chr11:9532508 3.80E-34 dispersed
Bpe05g00769 Bpe-Chr5:21055939 Bpe11g01273 Bpe-Chr11:9532508 5.22E-162 dispersed
Bpe11g01273 Bpe-Chr11:9532508 Bpe14g00665 Bpe-Chr14:5324064 1.22E-141 dispersed
Bpe13g00630 Bpe-Chr13:13235524 Bpe11g01273 Bpe-Chr11:9532508 7.18E-27 dispersed
Bpe11g01273 Bpe-Chr11:9532508 Bpe09g00681 Bpe-Chr9:15406769 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01273 - - pvy:116141626 640.958