Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01310 ATGAGGATTATGATAAAAGGTGGTGTGTGGAAGAACACGGAGGATGAGATCCTCAAAGCTGCTGTTATGAAATATGGCAAAAATCAGTGGGCTCGTATCTCCTCCCTTCTCGTTCGTAAATCAGCCAAACAGTGTAAAGCTCGCTGGTATGAATGGCTTGACCCCTCCATTAAGAAGACGGAGTGGACTCGAGAGGAAGATGAGAAGCTACTCCACCTTGCTAAGCTCATGCCAACTCAGTGGAGAACTATTGCTCCCATTGTCGGCCGGACTCCATCCCAGTGCCTTGAACGGTATGAAAAACTCCTTGATGCAGCATGTGTCAAAGATGACAACTATGAACCTGGTGATGACCCACGTAAGTTACGTCCTGGGGAGATAGACCCAAACCCTGAATCAAAGCCGGCACGTCCTGATCCCGTTGACATGGATGAAGATGAAAAAGAAATGCTTTCTGAAGCACGAGCCAGGTTAGCGAATACTAGAGGTAAAAAAGCAAAGAGGAAAGCAAGGGAGAAACAGCTGGAAGAAGCTAGGCGACTTGCTTCTTTACAAAAGAGAAGAGAATTAAAGGCAGCCGGTATTGATAATAGACATCGGAAGAGGAAGAGGAAAGGAATAGATTATAATGCTGAAATTCCATTTGAGAAGAGGCCTCCTCCTGGGTTTTTTGATGTGACTGAGGAAGATAGACCTGTGGAGCAGCCCAAATTTCCTACCACGATTGAAGAACTTGAAGGGAAAAGAAGAGTTGATGTGGAATCACAATTAAGAAAGCAAGATGTTGCTAAGAATAAAATCGCACAAAGACAGGATGCTCCATCAGCTATATTGCAAGCCAACAAGTTAAATGATCCTGAAACCGTGAGAAAAAGATCAAAACTAATGCTTCCTGCTCCTCAAATTTCAGATCACGAACTAGAGGAAATTGCAAAGATGGGCTATGCTAGTGATCTTCTTACTGGGAGTGAGGAGCTCATTGAAGGCAGTGGAGCAACACGTGCTCTTCTTGCAAATTATGCTCAAACACCACGACAGGGAATGACACCTTTTCGGACACCACAAAGAACTCCTGCTGGTAAGGGAGATGCAATAATGATGGAAGCAGAAAACCTGGCTAGGTTGAGAGAGTCTCAGACACCATTGTTAGGAGGAGAGAATCCAGAGTTGCATCCATCAGATTTTTCTGGCGTCACTCCCAAGCGAAAAGAAATACAGACTCCAAATCTGATGTTGACGCCTGCGGCAACACCTGGGGGCCCTGGTCTCACTCCAAGAAGTGGCCTGACACCAGCCAGGGAAGGTTATTCTTTTGGAATGACTCCAAAGGGTACTCCGATTAGGGATGATTTACACATCAACGAAGAGATGGACATTCATGATAATGCTAAACTTGAGCTAAGGAGACAAGCCGATTTGAGGAGGAACTTACGTTCAGGTTTGGGCAATCTTCCACAGCCCAAGAATGAGTATCAAATAGTTATGCAGCCAGTTCAAGAAGACAATGAGGAACCTGAGGAGAAAATTGAAGAGGATATGTCAGATAGAATTGCTAGAGAGAGAGCTGAGGAAGATGCAAGGCAGCAAGCATTACTTAGGAAGAGATCTAAAGTACTTCAACGAGAGCTTCCCAGACCTCCTCTTGCTTCATTAGAATTAATTAAGAATTCTTTAATGAGAGCTGATGAAGACAAGAGCTCATTTGTTCCTCCTACTTCCATCGAACAGGCTGATGAAATGATTAGGAAGGAGCTTGTATCACTACTGGAGCATGACAATGCAAAGTATCCTCTGAATGACAAAGTTAATAAAGAGAAGAGGAAAAGTATTAAGCGTTCTACTGTTGATCCCATTCCTACGATTGAAGAATTTGAAGAAGATGAGCTAAATGAGGCTGTTTTTTTAATAAATGAAGAGGTTGAGTGCCTTCGAGTGGCGATGGGACATGAAAATGAATCCCTTGATGAATTTGTCGAGGCACATAAAACTTGCCAGAATGATCTCATGTATTTTCCCACTCGAAATGCTTATGGTCTTTCAAGTGTTGCTGGAAATATGGAGAAGCTTGCAGCCTTGCAAAATGAATTTGAGAATGTGAAAAAGAAAATGGATGATGATACTGAAAAGGCTGTACGGATGGAGAAGAAGGTTAAAGTTCTTACGCAGGGTTATGAGACAAGGGCTAAAACAAGCCTCTGGCCTCAAATTGAAGCAACCTTCAAGCAGATGGACACTGCTGCAACAGAACTGGAGTGCTTCCAAGCTTTACACAAGGAAGAGCTATTAGCTGCCTCGCACAGGATAAATATTCTCCGGGAAGAAGTTCAAAAGCAAAAGGAGCTTGAGCATATTTTACAGATGCGATATGCGAATCGTGTAATGGAGTTGGAAAGAACACAACACCTTATCAATGAATACAGAGCAGAAGCAAAACAGCAAGAAGAAATTGCAGCTGCAAATCGTGCTCGTGAGCTAGAGGTTACTGAAGCAAGTGAAAATAAAGGACCGATCGAAGCAACCGAACCAATGACTTCTGTTGCAGGGGATTCATTAGCTGATGAAAATGCTTCTCAAAATCCGAGTACAGTTGATAATGCCTCAGAGAAAGATCCAGCAATAGTGAGTATGGATGTTGATATACCCGACAATATTTCTTCTGCCAGTGAGGTGGGACCTGCAGTAGTAGCACAAGAAGATGGCAATGAAGATGGGATTTTGACGGAGGAAAATTTTGATTCTTCTGGGAAACTTTCTGAATCAGTCCTTGCTGACGAAGACAAGATTTCAAGTGAGCAGCATAAGCATATCACAGAAAGCACGAACCCAGGTGTTGAGTCGACTCAACGAGATGAAACCACCCCAAACTCGGCAGAAGCATGA 2880 43.37 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARRLASLQKRRELKAAGIDNRHRKRKRKGIDYNAEIPFEKRPPPGFFDVTEEDRPVEQPKFPTTIEELEGKRRVDVESQLRKQDVAKNKIAQRQDAPSAILQANKLNDPETVRKRSKLMLPAPQISDHELEEIAKMGYASDLLTGSEELIEGSGATRALLANYAQTPRQGMTPFRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKRKEIQTPNLMLTPAATPGGPGLTPRSGLTPAREGYSFGMTPKGTPIRDDLHINEEMDIHDNAKLELRRQADLRRNLRSGLGNLPQPKNEYQIVMQPVQEDNEEPEEKIEEDMSDRIARERAEEDARQQALLRKRSKVLQRELPRPPLASLELIKNSLMRADEDKSSFVPPTSIEQADEMIRKELVSLLEHDNAKYPLNDKVNKEKRKSIKRSTVDPIPTIEEFEEDELNEAVFLINEEVECLRVAMGHENESLDEFVEAHKTCQNDLMYFPTRNAYGLSSVAGNMEKLAALQNEFENVKKKMDDDTEKAVRMEKKVKVLTQGYETRAKTSLWPQIEATFKQMDTAATELECFQALHKEELLAASHRINILREEVQKQKELEHILQMRYANRVMELERTQHLINEYRAEAKQQEEIAAANRARELEVTEASENKGPIEATEPMTSVAGDSLADENASQNPSTVDNASEKDPAIVSMDVDIPDNISSASEVGPAVVAQEDGNEDGILTEENFDSSGKLSESVLADEDKISSEQHKHITESTNPGVESTQRDETTPNSAEA 959
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9811747 9816040 - Bpe004637.3 Bpe11g01310 111455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01310 959 MobiDBLite consensus disorder prediction 157 176 - -
Bpe11g01310 959 Gene3D - 5 58 - -
Bpe11g01310 959 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Bpe11g01310 959 Coils Coil 682 716 - -
Bpe11g01310 959 Coils Coil 167 187 - -
Bpe11g01310 959 SMART sant 58 105 IPR001005 -
Bpe11g01310 959 SMART sant 6 55 IPR001005 -
Bpe11g01310 959 MobiDBLite consensus disorder prediction 851 870 - -
Bpe11g01310 959 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Bpe11g01310 959 CDD SANT 10 53 IPR001005 -
Bpe11g01310 959 Gene3D - 59 114 - -
Bpe11g01310 959 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Bpe11g01310 959 MobiDBLite consensus disorder prediction 919 934 - -
Bpe11g01310 959 CDD SANT_CDC5_II 55 106 - -
Bpe11g01310 959 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Bpe11g01310 959 Coils Coil 796 823 - -
Bpe11g01310 959 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Bpe11g01310 959 MobiDBLite consensus disorder prediction 935 959 - -
Bpe11g01310 959 Pfam Myb-like DNA-binding domain 10 70 - -
Bpe11g01310 959 MobiDBLite consensus disorder prediction 213 233 - -
Bpe11g01310 959 PANTHER - 1 839 - -
Bpe11g01310 959 MobiDBLite consensus disorder prediction 110 150 - -
Bpe11g01310 959 Pfam pre-mRNA splicing factor component 407 655 IPR021786 -
Bpe11g01310 959 MobiDBLite consensus disorder prediction 883 959 - -
Bpe11g01310 959 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 839 - -
Bpe11g01310 959 MobiDBLite consensus disorder prediction 851 868 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01310 Bpe-Chr11:9811747 Bpe04g01326 Bpe-Chr4:19845724 5.06E-11 dispersed
Bpe11g01310 Bpe-Chr11:9811747 Bpe09g00664 Bpe-Chr9:15273420 1.65E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22097 PF11831 Myb_Cef 8.10E-58 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01310 K12860 - csv:101205030 1392.48