Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01312 | ATGGATTCCTCCGTCTTCATCTTTTCTGGTTCTTCTTCTTTTTCCTCTTCAATGGAGTCTTTCTCGTGGAAATCTAGCCTTCATTTGGAGAACAATCTCTTACCTTTCAATCAGAACGATTCCGAAGAAATGCTTCTTTACGGAGTTCTTTCTGAGCCCGTCATCAATCGTTCTTCCGATTCTAATTTCTCGTCACATTTGTCGAACGATCAGGAGGAGGTGGATTCGGAATCTGCGAAAGAGTCGGAGGTTTGTTACAGAGGAGTGAGGAGAAGGCCGTGGGGAAAATTCGCTGCGGAGATCAGAGATTCCACGAGAAATGGAGTTAGGGTTTGGTTGGGGACTTTCGACACGGCGGAGGCGGCGGCGCTGGCGTACGATCAAGCGGCGTTCGCGATGCGAGGCTCAAGCGCTGTGCTTAATTTCCCGGCGCAAATGGTGGAGCAATCACTGCGCGAGATGAATTACGGAGCGGAGGAGGGGAGTTCCCCTGTTCTGGCTCTGAAGAAGAGGCATTCGATGAAGAAAAAACCTAAAAATTCGAAAACGAAGAAGAAGGAGAACGATTCAGTTTCGGAAAACGTGGTGGTGTTTGAAGATTTGGGGGCTGAGTACTTGGAAGAACTTTTGGGATTGTACGTAGCTTCTTCCAATCCATGGTGA | 663 | 48.27 | MDSSVFIFSGSSSFSSSMESFSWKSSLHLENNLLPFNQNDSEEMLLYGVLSEPVINRSSDSNFSSHLSNDQEEVDSESAKESEVCYRGVRRRPWGKFAAEIRDSTRNGVRVWLGTFDTAEAAALAYDQAAFAMRGSSAVLNFPAQMVEQSLREMNYGAEEGSSPVLALKKRHSMKKKPKNSKTKKKENDSVSENVVVFEDLGAEYLEELLGLYVASSNPW | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9821697 | 9822359 | - | Bpe004639.1 | Bpe11g01312 | 111457 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01312 | 220 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B | 27 | 212 | - | - | |
Bpe11g01312 | 220 | SMART | rav1_2 | 85 | 149 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01312 | 220 | Pfam | AP2 domain | 85 | 135 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01312 | 220 | PANTHER | DNA-BINDING DOMAIN | 27 | 212 | IPR044808 | GO:0003700|GO:0009873 | |
Bpe11g01312 | 220 | CDD | AP2 | 86 | 145 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01312 | 220 | MobiDBLite | consensus disorder prediction | 61 | 80 | - | - | |
Bpe11g01312 | 220 | Gene3D | AP2/ERF domain | 85 | 145 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe11g01312 | 220 | ProSiteProfiles | AP2/ERF domain profile. | 85 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01312 | 220 | SUPERFAMILY | DNA-binding domain | 85 | 144 | IPR016177 | GO:0003677 | |
Bpe11g01312 | 220 | MobiDBLite | consensus disorder prediction | 169 | 190 | - | - | |
Bpe11g01312 | 220 | PRINTS | Ethylene responsive element binding protein signature | 86 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g01312 | 220 | PRINTS | Ethylene responsive element binding protein signature | 109 | 125 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g01312 | Bpe-Chr11:9821697 | Bpe08g00819 | Bpe-Chr8:10295982 | 8.77E-34 | dispersed | |
Bpe11g01312 | Bpe-Chr11:9821697 | Bpe14g01247 | Bpe-Chr14:9403953 | 3.68E-61 | wgd | |
Bpe11g01312 | Bpe-Chr11:9821697 | Bpe09g00646 | Bpe-Chr9:15102714 | 4.58E-32 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22098 | PF00847 | AP2 | 1.20E-15 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01312 | K14516 | - | fve:101312740 | 209.534 |