Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01332 ATGGATAGGAACACGCATGAGGGGATTGGGGATGATTTCTTCGAGCAGATTTTAGCTGTGCCTCCGGCTTTTAATGGTGGAGACGCGGTCGAGTATGGCGGAAGTGAGGCGAGCTCTGTGGCTATGGCGTTACAGTTAGGGTCTGGAGTGGGAGGTGGAAGAGACGATTGCGGTGCCTCTGGTGGTGGATTGAGAGGGATCGCCATGCAACGGTTGGGTATGCCTCTTGGATTGAACTTGGAACAGAGCTTTTTGAGGCGAGAGAGATTTGGAGAAGAGATTGAAGCTAATAGTCGTAACAATGCGAATAATAATGCTTCTTCTTCTGCTACTTCTGGAATTTCTGAAAGAGATTCTGTGCATATGAACGCTTTATTACCAACTTTTGGACATGTACACTGTCGGTCTTTTCGACCGGAGCAACCTCCTTCCCAACTCCACCAGCCCTTTCATTGTCAACCAATCTCTGGGCAAATTCCTGCTGTGTCCCAGCCACCCACGATCCGACCTCGTGTTCGAGCAAGGAGAGGCCAAGCTACAGATCCTCACAGCATTGCAGAGAGGTTGCGAAGGGAAAGAATTGCAGAAAGAATGAAGGCTTTGCAGGAGTTGGTTCCTAGTTGTAACAAGTCAGATAGGGCAGCTATGCTTGATGAAATTGTGGATTATGTAAAGTTTCTAAGGCTTCAAGTCAAGGTTCTGAGCATGAGCAGATTGGGTGGAGCGGGTGCAGTGGCTCAGCTCATTTCGGATGTCCCTGGAATGGGTGTAGAAATTGAAGGGGGAATTAATCAACAAGCTTGGGAAAAATGGTCAACTGATGGAACAGAGCAACAAGTAGCCAAATTGATGGAAGAAGACATCGGAGCTGCAATGCAATTGCTTCAATCCAAGGCTCTATGCATCATGCCCATATCATTAGCTTCAGCAATTTTCCAAACCCACCAACCAGACACTCAGATGACCATTAAGCCAGAATCCGACACCCCATAA 993 47.63 MDRNTHEGIGDDFFEQILAVPPAFNGGDAVEYGGSEASSVAMALQLGSGVGGGRDDCGASGGGLRGIAMQRLGMPLGLNLEQSFLRRERFGEEIEANSRNNANNNASSSATSGISERDSVHMNALLPTFGHVHCRSFRPEQPPSQLHQPFHCQPISGQIPAVSQPPTIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKSDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLISDVPGMGVEIEGGINQQAWEKWSTDGTEQQVAKLMEEDIGAAMQLLQSKALCIMPISLASAIFQTHQPDTQMTIKPESDTP 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9959231 9963733 - Bpe004659.1 Bpe11g01332 111477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01332 330 SMART finulus 184 233 IPR011598 GO:0046983
Bpe11g01332 330 Pfam Helix-loop-helix DNA-binding domain 183 227 IPR011598 GO:0046983
Bpe11g01332 330 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 237 IPR036638 GO:0046983
Bpe11g01332 330 Gene3D - 173 235 IPR036638 GO:0046983
Bpe11g01332 330 MobiDBLite consensus disorder prediction 96 116 - -
Bpe11g01332 330 PANTHER DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED 7 319 - -
Bpe11g01332 330 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 319 - -
Bpe11g01332 330 MobiDBLite consensus disorder prediction 95 116 - -
Bpe11g01332 330 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe09g00634 Bpe11g01332 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00640 Bpe-Chr1:4315263 Bpe11g01332 Bpe-Chr11:9959231 8.40E-60 dispersed
Bpe02g02124 Bpe-Chr2:22621844 Bpe11g01332 Bpe-Chr11:9959231 1.24E-56 dispersed
Bpe10g00326 Bpe-Chr10:10770506 Bpe11g01332 Bpe-Chr11:9959231 2.24E-19 dispersed
Bpe11g00207 Bpe-Chr11:1408095 Bpe11g01332 Bpe-Chr11:9959231 3.52E-20 dispersed
Bpe11g01332 Bpe-Chr11:9959231 Bpe13g01167 Bpe-Chr13:17101286 3.80E-57 dispersed
Bpe06g00444 Bpe-Chr6:15792577 Bpe11g01332 Bpe-Chr11:9959231 2.57E-89 transposed
Bpe10g00393 Bpe-Chr10:11477617 Bpe11g01332 Bpe-Chr11:9959231 4.56E-99 transposed
Bpe11g01332 Bpe-Chr11:9959231 Bpe09g00634 Bpe-Chr9:15007611 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22101 PF00010 HLH 2.00E-07 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01332 - - zju:107412218 405.601