Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01366 | ATGGATCCTCAAGGACCAAGCCAACCTCCGTCGATGGGGGTGGTTGGGGGCGGGCTTCAATTTCCATACGGTTCAAGCTTTTACGAGCCGAACCAAATCGCTGGAACCCAAAGTGCTGGGACGATGATCGGAGCCGTTCAATCCGCAAGTCAGCCTGGGGGACCCCAGCTAGCATTTCAGCAGATGCACCAGCAACTCCAGCAGCAGCTCCAGAACTTCTGGGAGAATCAGAGCCGTGAAATCGAGAAGGTGACAGATTTCAAAAACCATAGCCTCCCATTGGCCAGGATCAAGAAGATCATGAAGGCGGACGAAGATGTGCGGATGATCTCGGCCGAGGCCCCCGTCGTGTTTGCCAGGGCGTGTGAAATGTTCATCTTGGAATTGACCCTCCGATCGTGGAATCACACGGAGGAGAACAAACGGAGGACGCTCCAGAAGAACGACATTGCAGCCGCAATCACGAGAACTGATATCTTTGACTTTTTGGTTGACATTGTCCCGAGGGACGATCCGAAAGACGAAGTGCTCGCCTCCTTCCCTCGGGGAGCTATGCCGGTTGGGGCCCCAGTCGACGGGATCCCCTACGACATGCCACCTCAGCATCCAGGGATGATGGCAGGGATGTATGCCCCTCCACCTCACCCCTACATGGTACCGCAAATGTGGCCCCACGTACCGGATCAACATCAATCGAGTTCCGATCAGTAG | 711 | 55.41 | MDPQGPSQPPSMGVVGGGLQFPYGSSFYEPNQIAGTQSAGTMIGAVQSASQPGGPQLAFQQMHQQLQQQLQNFWENQSREIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDDPKDEVLASFPRGAMPVGAPVDGIPYDMPPQHPGMMAGMYAPPPHPYMVPQMWPHVPDQHQSSSDQ | 236 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10229589 | 10230299 | + | Bpe004692.1 | Bpe11g01366 | 111511 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01366 | 236 | Gene3D | Histone, subunit A | 56 | 169 | IPR009072 | GO:0046982 | |
Bpe11g01366 | 236 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 | 1 | 236 | - | - | |
Bpe11g01366 | 236 | SUPERFAMILY | Histone-fold | 66 | 163 | IPR009072 | GO:0046982 | |
Bpe11g01366 | 236 | Pfam | Core histone H2A/H2B/H3/H4 | 61 | 154 | IPR007125 | GO:0003677 | |
Bpe11g01366 | 236 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 1 | 236 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g01628 | Bpe-Chr4:22520131 | Bpe11g01366 | Bpe-Chr11:10229589 | 2.69E-11 | dispersed | |
Bpe05g00636 | Bpe-Chr5:20211021 | Bpe11g01366 | Bpe-Chr11:10229589 | 4.63E-32 | dispersed | |
Bpe11g01366 | Bpe-Chr11:10229589 | Bpe13g00200 | Bpe-Chr13:9976332 | 9.43E-62 | dispersed | |
Bpe11g01366 | Bpe-Chr11:10229589 | Bpe12g00039 | Bpe-Chr12:321227 | 2.37E-69 | transposed | |
Bpe11g01366 | Bpe-Chr11:10229589 | Bpe15g00914 | Bpe-Chr15:18944838 | 2.24E-69 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22107 | PF00808 | CBFD_NFYB_HMF | 3.90E-18 | CL0012 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01366 | K08066 | - | csv:101209664 | 314.309 |