Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01396 ATGGGGCATTTGTCCTCCATGTTCAATGGATTGGCAAAGTCGTTTTCAGTGAGGAAGGGGATAATTAAAGAAAATGTTGGTGCACAAGAAGCTGCAGAAGCCATGGAAAAGGATGCTAAGAAAAAGGATTTAATTTTGCGTACTTCCACCAGCGTTAACTTTGATGGATCGAGCAATTTCGCCTCTGTTTGTTCTAAGAAGGGCGAGAAAGGAGTGAATCAAGATTGTTGCATAGTTTGGGAGGAATTTGGATGCCAAGATGATATGATTTTTTGTGGCATTTTTGATGGCCATGGGCCATGGGGCCATTTTGTTGCAAAAAAAGCTAGAGAATCAATGCCATCATCTCTTCTGTGCCATTGGCAAGAAGCTCTATCTCAATCTTCCTACGAATCGGACATGGACTCAGACTTTGATAAAAACCACCAATGCTTTGAGCTATGGAAAAATTCTTACATAAAAACTTGTGCAGCTATTGATCAGCAGCTTGAGCAGCATCGGAAAATTGACTCATATTACAGCGGAACGACAGCCTTGTCAATTGTAAGACAGGGAGAGTTAATTGTCATAGCTAACGTCGGAGACTCTCGAGCTGTATTAGCGACATCTTTAGGTGATGGAAGCTTAGTACCAGTTCAACTTTCTGTCGATTTCAAGCCCAATTTGCCTCAGGAGGCAGAGCGGATAACTCAGTGCAACGGCCGAGTGTTCTGCTTAGACGATGAGCCAGGAGTTCACAGGGTGTGGCTGCCGTATGAGCAATCACCAGGACTTGCTATGTCACGAGCATTTGGCGATTACTGTGTCAAAAGCTTCGGTCTTATATCGGTTCCGGAAGTGACTCAGAGAATTATAACAGATGAAGATCATTTTGTCATCCTAGCAACTGATGGGGTATGGGATGTTATTTCAAATCAAGAAGCTGTGCTTATTGTATCTTCGGCCCCAGAGCGAGCAAAATCAGCCAAGTGTCTAGTGAAGGCAGCGGCTCGGGCATGGAAACGGAAACGCCCCGGGATCGCAAAGGACGACATATCAGCAATATGTCTCTTCTTTAGCCCTTCTCCTTAG 1071 44.44 MGHLSSMFNGLAKSFSVRKGIIKENVGAQEAAEAMEKDAKKKDLILRTSTSVNFDGSSNFASVCSKKGEKGVNQDCCIVWEEFGCQDDMIFCGIFDGHGPWGHFVAKKARESMPSSLLCHWQEALSQSSYESDMDSDFDKNHQCFELWKNSYIKTCAAIDQQLEQHRKIDSYYSGTTALSIVRQGELIVIANVGDSRAVLATSLGDGSLVPVQLSVDFKPNLPQEAERITQCNGRVFCLDDEPGVHRVWLPYEQSPGLAMSRAFGDYCVKSFGLISVPEVTQRIITDEDHFVILATDGVWDVISNQEAVLIVSSAPERAKSAKCLVKAAARAWKRKRPGIAKDDISAICLFFSPSP 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10409886 10412093 + Bpe004719.1 Bpe11g01396 111541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01396 356 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 356 - -
Bpe11g01396 356 SMART PP2C_4 49 350 IPR001932 -
Bpe11g01396 356 CDD PP2Cc 59 352 IPR001932 -
Bpe11g01396 356 SUPERFAMILY PP2C-like 48 353 IPR036457 -
Bpe11g01396 356 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Bpe11g01396 356 Pfam Protein phosphatase 2C 75 319 IPR001932 -
Bpe11g01396 356 Gene3D - 48 353 IPR036457 -
Bpe11g01396 356 PANTHER ALPHABET, ISOFORM E-RELATED 1 356 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01396 Bpe-Chr11:10409886 Bpe14g00665 Bpe-Chr14:5324064 3.52E-99 dispersed
Bpe11g01396 Bpe-Chr11:10409886 Bpe09g00577 Bpe-Chr9:14567578 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01396 - - rcu:8287127 548.895