Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01398 ATGTCTACTTTTACCAAGCCAGAGAATGCTTTAAAACGAGCTGAAGAGTTAATCAATGTCGGGCAAAAGCAAGATGCATTACAAGCTCTTCATGACCTCATCACCTCCAAAAAATATCGAGCATGGCAAAAGCCACTTGAAAAGATTATGTTCAAATATGTGGAGCTTTGTGTGGACATGCGGAGAGGAAGGTTTGCGAAGGATGGTTTAATTCAATACCGAATAGTGTGTCAACAAGTCAATGTTTCTTCCTTAGAGGAGGTGATCAAACACTTTATGCATCTATCTTCTGAGAAAGCTGAGCAGGCTCGTAGTCAGGCACAAGCCCTTGAAGAAGCACTTGATGTTGATGACTTGGAAGCAGATAAAAGGCCAGAAGATTTGATGCTTAGTTATGTCAGTGGAGAGAAGGGAAAGGATAGGTCTGATCGTGAACTTGTGACTCCATGGTTCAAATTCTTATGGGAGACTTACAGGACAGTGCTTGAAATACTACGAAACAACTCAAAACTGGAGGCACTTTATGCTATGACAGCTCATCGAGCCTTCCAGTTCTGCAAACAGTATAAAAGAGCGACAGAGTTTCGCAGACTATGTGAAATTATCCGGAATCATCTATCAAACCTTAATAAATACAGGGACCAAAGAGATCGCCCCGACTTGTCAGCACCAGAGAGCTTGCAACTTTACCTTGATACGAGATTTGAACAGCTTAAAATTGCTACTGAACTCAAACTCTGGCAGGAAGCTTTTCGCTCGGTTGAGGATATCCATGGATTGATGTGCATTGTTAAGAAAACACCAAAGTCCTCCTTGATGGTTGTTTATTATGCTAAACTTACTGAAATATTTTGGATTTCGTCTAGCCATCTTTATCATGCTTATGCATGGTTCAAGCTTTTCACTCTTCAAAAAAGCTTCAACAAAAACTTAAACCAAAAGGATCTGCAGTTGATTGCATCGTCTGTTGTTTTGGCTGCACTTTCTGTTTCACCATATGATCGCACACTTGGTGCATCACATGTGGAACTTGAGAATGAAAAAGAACGCAACTTGCGAATGGCAAATCTTATAGGGTTCAATCTCGATCCTAAATACGACAGTAGGGAAGTGCTTTCACGGTCAAATCTTCTATCTGAACTGGTATCTAAAGGGGTGCTGAGCTGTGCAACTCAGGAAGTAAAAGATCTTTACCATCTCTTGGAGCATGAGTTTCTTCCTCTTGATCTCGCCACAAAACTGCAGCCTCTGTTGACTAAAATTTCAAAGCTTGGGGGTAAGCTTTCTTCTGCTTCATCTGTACCAGAAGTGCAATTTTCGCAATATGTCAACACCTTGGAAAAGCTTGCTACTTTGAGGGTGCTTCAGCAGGTGTCTCAAGTTTACCAGTCAATGAAAATTGAGAGTTTATCTCGGATGATCTCTTTCTTTGATTTCTCGACTGTTGAGAAAATTGCTGTTGACGCTGTCAAACATAATTTTGTAGCTATGAAAGTTGATCACTCAAGAGGCGTGGTGGTGTTTGGTAATGTGGGTTTTGAATCTGATGGAATTAGAGATCACTTGTCTACTTTTGCTGAACATTTAAATAAAGCAAGGGCCATGATATATCCACCTATTACGAAAGCATCGAAAACAGAACAAATGTTGTCTAGTCTGGCAGACGTAGTGGAGAAGGAACACAAAAAGCTTCTTGCTCGAAAATCTATTATTGAAAAAAGAAAAGAAGAACAGGAACGCCATCATTTAGAAATGGAGCGTGAGGAGGAGTCAAAACGGATTAAACTACAAAAGATTACTGAAGAGGCAGAGCAAAAGAGGCTTGCATCTGAGTATGAGCAAAGAAAAAACCAAAGAATACTTAGGGAAATAGAGGAACGAGAACTTGAAGAAGCTCAGGCTTTACTTCAAGAAGCAGAAAAGCGTGTTGGTAAGAAGAAGGGAAAGAAGCCAATTTTAGAAGGGGAAAAGGTGACAAAGCAAACCTTAATGGAACTAGCACTGAATGAGCAGCTCAGGGAAAGGCAGGAAATGGAGAAGAAATTACAAAAATTGGCAAAAACAATGGATTATTTGGAGAGAGCAAAAAGAGAAGAAGCAGCACCTTTGATTGAAGCTGCATTTCAGCAACGTATAGTGGAGGAGAGAGAGCTCCATGAACGGGAGCAGCAGCTTGAGGTTGAATTGAGCAAACAACGACATGAAGGGGACCTCAAGGAGAAGAATCGACTGATTCGGATGGTGGACAATAAGAAAATATTCCAGGAGAAAGTTATGAGTCGCAGGAAAGAAGAGTTTGACAGACGAAGAGCTGAAAGGGATGAAAAAATTCAGCAAATAATTCAATTAAAGAGACAGGAAAGGGATTCTAAAAGAAAGAAAATATTCTATGTGAGACGTGAAGAAGAGAGGCGCAGAAAACTGCATGAAGAGGAGGAGGCTCAAAAGCGTGAACTGGCTGAGAAACAAAAAAGAGACGAGGCTGAAAAGAAAGCAAAATTGGACATTATCGCTGAAAAGCAGAGGCAAAGGGAGCGAGAAATTGAGGAAAAGGAAAGAACGAGGAGAGAAGCTTTATCAGGGAAATCAAATGATGGAGCCAACAGGTCTTCTGAGACTCCTGCTTCTCTTCCTTCGGAATTTAGACCCGTTGCAGCGGCGGCTGCAGCAGCTGCTGCAGCCCCCCCATCTGCTGCGGGACCTGCAAAGTATGTGCTCAGGCACTTGCGTGAAAGAACAGTGAGCTCTGGAGAGGCTCCACCTCCTCGATCCGATGGGTGGGGAAGGCAGGATGATCGTGCCTCTCAGCCGACGGACAGGTGGCGACCTGGTTCACGATCGTCTTGGTCCTCGTCCAGGATTCCACCTCGTGGTGGAACCGAGCGCTGA 2889 42.68 MSTFTKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLEKIMFKYVELCVDMRRGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFMHLSSEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRATEFRRLCEIIRNHLSNLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELKLWQEAFRSVEDIHGLMCIVKKTPKSSLMVVYYAKLTEIFWISSSHLYHAYAWFKLFTLQKSFNKNLNQKDLQLIASSVVLAALSVSPYDRTLGASHVELENEKERNLRMANLIGFNLDPKYDSREVLSRSNLLSELVSKGVLSCATQEVKDLYHLLEHEFLPLDLATKLQPLLTKISKLGGKLSSASSVPEVQFSQYVNTLEKLATLRVLQQVSQVYQSMKIESLSRMISFFDFSTVEKIAVDAVKHNFVAMKVDHSRGVVVFGNVGFESDGIRDHLSTFAEHLNKARAMIYPPITKASKTEQMLSSLADVVEKEHKKLLARKSIIEKRKEEQERHHLEMEREEESKRIKLQKITEEAEQKRLASEYEQRKNQRILREIEERELEEAQALLQEAEKRVGKKKGKKPILEGEKVTKQTLMELALNEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAFQQRIVEERELHEREQQLEVELSKQRHEGDLKEKNRLIRMVDNKKIFQEKVMSRRKEEFDRRRAERDEKIQQIIQLKRQERDSKRKKIFYVRREEERRRKLHEEEEAQKRELAEKQKRDEAEKKAKLDIIAEKQRQREREIEEKERTRREALSGKSNDGANRSSETPASLPSEFRPVAAAAAAAAAAPPSAAGPAKYVLRHLRERTVSSGEAPPPRSDGWGRQDDRASQPTDRWRPGSRSSWSSSRIPPRGGTER 962
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10423694 10429655 + Bpe004721.1 Bpe11g01398 111543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01398 962 Pfam PCI domain 373 509 IPR000717 -
Bpe11g01398 962 Coils Coil 568 593 - -
Bpe11g01398 962 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Bpe11g01398 962 Coils Coil 798 831 - -
Bpe11g01398 962 Gene3D - 268 343 - -
Bpe11g01398 962 Gene3D - 363 493 - -
Bpe11g01398 962 MobiDBLite consensus disorder prediction 910 962 - -
Bpe11g01398 962 Coils Coil 668 698 - -
Bpe11g01398 962 MobiDBLite consensus disorder prediction 940 962 - -
Bpe11g01398 962 Coils Coil 615 649 - -
Bpe11g01398 962 SMART PINT_4 441 532 IPR000717 -
Bpe11g01398 962 MobiDBLite consensus disorder prediction 863 877 - -
Bpe11g01398 962 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Bpe11g01398 962 Coils Coil 715 735 - -
Bpe11g01398 962 MobiDBLite consensus disorder prediction 802 862 - -
Bpe11g01398 962 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 915 - -
Bpe11g01398 962 Coils Coil 93 120 - -
Bpe11g01398 962 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 915 IPR027512 GO:0005852
Bpe11g01398 962 MobiDBLite consensus disorder prediction 925 939 - -
Bpe11g01398 962 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 941 IPR027512 GO:0005852
Bpe11g01398 962 Gene3D UVR domain 217 267 - -
Bpe11g01398 962 MobiDBLite consensus disorder prediction 802 880 - -
Bpe11g01398 962 Coils Coil 834 857 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01398 K03254 - csin:114278930 1372.07