Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01412 | ATGTGCTGTGAGGGTTTAGTTTTGGTTCAAAAGGTGTCTGAATTATATAAGCAAATCTCAAGCCTGGAGAGCCTGAAACCCTCGAAAGATGTCAATATACTCTTCACACAGCTAGTCCTAATATGCATTCCAGCATGGCCGGTTGATGTTACCCAGATGTGCGAAAGGGTGCAAGAAATGAGGTCTAACCTCATCAAATTGTGTGGAGAGGCTGAGGGTCTTTTGGAATCTCATTTTTCTTCAATCCTAGCCTCCTTTGAATACCCTCTTCATCATCTCAGTGTTTTTCCTTACTTTTCTAATTACGTCAAGCTTGCTCTTCTTGAGTTTAATCTTCTTAAACAGCACTGTGCTAAGGCCCCGACCAAAATTGCATTTGTGGGTTCTGGCCCTCTTCCTTTAACCTCCATTGTTATGGCCTCTAACCACCTCAAAACCACCGTATTTCATAATTATGATGTTGACCCTTCTGCTAACTTTATGGCTTCTAGGTTAATCTCGTCTGATCCTGATTTGTCGAAAAGAATGGTGTTTCACACGACAGATATATTGAAAGTTTCGAGTGGTTTGAGAGAGTGCGAGGTTGTTTTTCTTGCAGCCCTAGTTGGGTTTGACAAGGAGGAGAAAGTTCGAGTTATTGAACATTTGGGTAAAAACATGGCGGCTGGGTCTATTTTAATGGTGAGAAGTGCTCATGGCGCTCGAGCTTTTCTGTATCCGGTTGTTGAAGCTTCTGATCTTCGTGGGTTTGAGGTGCTCTCAGTTTTTCATCCCACTGATGAAGTTATCAATTCTGTTGTAATTGCTCGTAAATGA | 816 | 42.03 | MCCEGLVLVQKVSELYKQISSLESLKPSKDVNILFTQLVLICIPAWPVDVTQMCERVQEMRSNLIKLCGEAEGLLESHFSSILASFEYPLHHLSVFPYFSNYVKLALLEFNLLKQHCAKAPTKIAFVGSGPLPLTSIVMASNHLKTTVFHNYDVDPSANFMASRLISSDPDLSKRMVFHTTDILKVSSGLRECEVVFLAALVGFDKEEKVRVIEHLGKNMAAGSILMVRSAHGARAFLYPVVEASDLRGFEVLSVFHPTDEVINSVVIARK | 271 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10510840 | 10511655 | + | Bpe004735.1 | Bpe11g01412 | 111557 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01412 | 271 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 1 | 271 | IPR004298 | GO:0030410|GO:0030418 | |
Bpe11g01412 | 271 | PANTHER | SYNTHASE, PUTATIVE-RELATED | 1 | 271 | - | - | |
Bpe11g01412 | 271 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 1 | 271 | IPR004298 | GO:0030410|GO:0030418 | |
Bpe11g01412 | 271 | Gene3D | Vaccinia Virus protein VP39 | 5 | 271 | IPR029063 | - | |
Bpe11g01412 | 271 | Pfam | Nicotianamine synthase protein | 7 | 271 | IPR004298 | GO:0030410|GO:0030418 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g01840 | Bpe11g01412 | CCT | |
Bpe09g00561 | Bpe11g01412 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g01412 | Bpe-Chr11:10510840 | Bpe11g01413 | Bpe-Chr11:10515122 | 2.63E-136 | tandem | |
Bpe08g00689 | Bpe-Chr8:7980804 | Bpe11g01412 | Bpe-Chr11:10510840 | 1.35E-95 | transposed | |
Bpe10g00180 | Bpe-Chr10:4939989 | Bpe11g01412 | Bpe-Chr11:10510840 | 1.10E-96 | transposed | |
Bpe11g01412 | Bpe-Chr11:10510840 | Bpe02g01840 | Bpe-Chr2:20532770 | 3.11E-144 | wgd | |
Bpe11g01412 | Bpe-Chr11:10510840 | Bpe09g00561 | Bpe-Chr9:14428648 | 1.58E-133 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01412 | K05953 | - | tcc:18600574 | 407.142 |