Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe11g01413 | ATGGTTTGCCAAGAAGAGCCTTTGGTACGCAAAGTCTGCGAAATGTACGACCAAATCTCAAACCTGGAGAACCTCAAACCTTGCGAAAATGTCGACATACTCTTCACCCAGCTGGTGCTGACTTGTATGCAACCAAGCCCTGTTGATGTAAACAAACTTTGCACGAGGGTTCAGCAAGTCAGAGCCAAACTCATTCGGCTCTGCGCTGAGGCTGAGGGTCTTTTAGAAAGCCATTTCTCGACCATCTTAGCCTCTTTTAAAAACCCACTTCAAAGTCTCGACCTTTTCCCTTACTATCCCAACTACCTCAAACTTAGCCTTCTTGAGTTCAATATCCTTACAGATCATTGCAAAAACCCACCCTCAAAACTTGCTTTTATTGGGTCTGGATCACTTCCTCTCACCTCCATTGTTTTAGCCCTTAATCACCTCCCCTCCACCATTTTTCACAACTATGATATCGACCCTTTAGCCAACTCAAAGGCTTTATCTTTGATTTCATCTCATCCTGATTTGTCAAAAAGAATGTTTTTTCACACTGCTGATATAATGAACGTTACCAATGCTTTGAAAGAGTACCAAGTCGTGTTTTTAGCTGCTTTAGTTGGTATGAACAAGGAAGAGAAAGCTAAAGTTGTAGACCATTTGTGCAAGTTTATGGCTCCTGGAGCTTATCTGATGGTTCGAAGCGCCCATGGAGCGAGGGCTTTTCTGTACCCAGTTGTTGAATTTGCCGATCTTCGCGGGTTTGAGATCCTGTCTGTGTTTCACCCAACTGACGAGGTTATAAATTCAGTCATTATTGCGAGGAAAGAGACGATATCCGTTGATCGATTTGATGAGCAGGGGAACAAATCCATGGTAATTTGTAAGTGCTCCGAAATGCAGACCTTCAGTGTTCCAAAAATGGAGGAATTCGCCACGGAGCAGCTTTCTTAA | 939 | 43.34 | MVCQEEPLVRKVCEMYDQISNLENLKPCENVDILFTQLVLTCMQPSPVDVNKLCTRVQQVRAKLIRLCAEAEGLLESHFSTILASFKNPLQSLDLFPYYPNYLKLSLLEFNILTDHCKNPPSKLAFIGSGSLPLTSIVLALNHLPSTIFHNYDIDPLANSKALSLISSHPDLSKRMFFHTADIMNVTNALKEYQVVFLAALVGMNKEEKAKVVDHLCKFMAPGAYLMVRSAHGARAFLYPVVEFADLRGFEILSVFHPTDEVINSVIIARKETISVDRFDEQGNKSMVICKCSEMQTFSVPKMEEFATEQLS | 312 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 10515122 | 10516060 | + | Bpe004736.1 | Bpe11g01413 | 111558 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe11g01413 | 312 | Pfam | Nicotianamine synthase protein | 5 | 273 | IPR004298 | GO:0030410|GO:0030418 | |
| Bpe11g01413 | 312 | PANTHER | SYNTHASE, PUTATIVE-RELATED | 1 | 303 | - | - | |
| Bpe11g01413 | 312 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 1 | 276 | IPR004298 | GO:0030410|GO:0030418 | |
| Bpe11g01413 | 312 | Gene3D | Vaccinia Virus protein VP39 | 7 | 273 | IPR029063 | - | |
| Bpe11g01413 | 312 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 1 | 303 | IPR004298 | GO:0030410|GO:0030418 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe02g01840 | Bpe-Chr2:20532770 | Bpe11g01413 | Bpe-Chr11:10515122 | 1.28E-143 | dispersed | |
| Bpe09g00561 | Bpe-Chr9:14428648 | Bpe11g01413 | Bpe-Chr11:10515122 | 0 | dispersed | |
| Bpe10g00180 | Bpe-Chr10:4939989 | Bpe11g01413 | Bpe-Chr11:10515122 | 1.81E-91 | dispersed | |
| Bpe11g01412 | Bpe-Chr11:10510840 | Bpe11g01413 | Bpe-Chr11:10515122 | 2.63E-136 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe11g01413 | K05953 | - | pop:112327508 | 434.106 |