Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01434 ATGTTTTTAAAGATCGCTGAATACAAAGCCGGCATCGTCCCGATCCAATTCCGGAAAATTCTCTGCGCGAAGAGCGGAGGTGTCAAATTCGAGATCAACGGAAACCCTAATTTTCTGCTCGTTTTGGTTTTCAACGTCGGAGGTGCCGGCGACGTTGTTGACGTGAAAGTCAAGGGATCCAACACCAATTGGTTGCAGATGAACCGTAATTGGGGCGACAAGTGGGACAACGGCACACCATTGGTAGGGCAGAGCTTGTCGTTCCAGGTGACTACTAGCGACGGGAGTTCGGTGGAATGCGACAATGTCGCTCCGGCTAATTGGCAATTCGGCCAGACCTATGAATCTAGTGCCAATTTCTAG 363 50.14 MFLKIAEYKAGIVPIQFRKILCAKSGGVKFEINGNPNFLLVLVFNVGGAGDVVDVKVKGSNTNWLQMNRNWGDKWDNGTPLVGQSLSFQVTTSDGSSVECDNVAPANWQFGQTYESSANF 120
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10660893 10661255 + Bpe004756.1 Bpe11g01434 111579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01434 120 PANTHER EXPANSIN-A15 1 120 IPR002963 GO:0009664
Bpe11g01434 120 PRINTS Expansin signature 38 59 IPR002963 GO:0009664
Bpe11g01434 120 PRINTS Expansin signature 26 38 IPR002963 GO:0009664
Bpe11g01434 120 PRINTS Expansin signature 2 15 IPR002963 GO:0009664
Bpe11g01434 120 PRINTS Expansin signature 73 94 IPR002963 GO:0009664
Bpe11g01434 120 PRINTS Expansin signature 102 118 IPR002963 GO:0009664
Bpe11g01434 120 PANTHER EXPANSIN 1 120 - -
Bpe11g01434 120 PRINTS Expansin/Lol pI family signature 102 116 IPR007118 GO:0005576
Bpe11g01434 120 PRINTS Expansin/Lol pI family signature 10 26 IPR007118 GO:0005576
Bpe11g01434 120 PRINTS Expansin/Lol pI family signature 64 78 IPR007118 GO:0005576
Bpe11g01434 120 SUPERFAMILY PHL pollen allergen 24 116 IPR036749 -
Bpe11g01434 120 Pfam Expansin C-terminal domain 28 105 IPR007117 -
Bpe11g01434 120 Gene3D - 26 120 IPR036749 -
Bpe11g01434 120 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 37 116 IPR007117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01434 Bpe-Chr11:10660893 Bpe04g01713 Bpe-Chr4:22972599 4.06E-45 dispersed
Bpe11g01434 Bpe-Chr11:10660893 Bpe04g00743 Bpe-Chr4:4754375 1.15E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01434 - - zju:107415875 175.637