Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01439 GTCGATGACGCAGATAGCAACAGCGACGATGATCCCGTGTCCAGCCCCGCAGAATGCTACGCCTGCACACAGGTTGGCGTTCCCGCCTTTCACTCCACCAGCTGTGACCGAGCGAACCAGCCGGAATGGGAGGCCTCTGCCGGGTCCTCCCTCGTACCCATCAAAAACAAGAAGGAGCAGAGTCCAGAGACAAGAACCCAGAGACCATCGGGCTTTTTCGGAGCGTTACGGGACCCGAGAAGTAAGCAGGTCCGGGGATGGAACAGAGCGATCTTATTGGCTCGTGGCTTGGCCTTAGCCGTCGATCCACTCTTCTTCTACGCGCTATCTATAGGACGAGGAGGTACTCCGTGCCTGTTCATGGACGGTGGATTAGCCGCAATCGTGACCGTAATTCGCACGTGTGTGGACGTCCTTCATCTCTGGCACATGTGGTTCCAGTTCCGGACGGCGTACGTGTCGAGGGAGTCTCTAGTAGTAGGCTGCGGAAAACTTGTGTGGGACGCACGCGCCGTCGCTCTGCACTACCTCAGGTCGTTCAAAGGCTTCTGGTTCGACGCCTTCGTCATAATCCCAGTTCCACAGGCAGTGTTCTGGCTGGTATTGCCGAAATTGATTAGGGAAGAGAGGATAAAGGTGATAATGACGGTGCTGTTGATGATGTTCATGTTCCAATTTCTACCCAAGGTTTACCACTGCATCTACACGATGAGGAGGATGCAGAAGGTGACTGGCTACATCTTTGGTACCATTTGGTGGGGTTTTGGCCTTAACCTCATTGCATATTTCATTGCTTCTCATGTTGCAGGTGGTTGCTGGTACGTCCTGGCGATACAGCGAGTGGCTTCTTGTCTGCAGCAGCACTGCCGCAGACATGGCTGCAATCTCTCCTTGTCTTGCTCCGAGGAGATTTGCTATCAATCTCTTCTACCTGCCAATTCCGTTGGCAATTTTTGCGGCGGAAATTCGACGGCGACTGCTATCAGAAAGCCTTTATGCTTGGACGAGCATGGATCCTTCCGCTACGGCATATATCAGTGGGCTCTTCCTGTTATTTCCAGTAATTCTGTTGTTGTTAAGGTGCTTTATCCCATATTTTGGGGCTTAATGACTCTCAGCACCTTTGGTAATGATCTCGAGCCTACAAGTAATTGGCTGGAAGTGATATTCAGTATTTGCCTCGTGTTGAGTGGACTAATGTTGTTCACTCTGTTGATCGGGAATATCCAGGTATTTTTGCACTCTGTGATGGCGAAAAAGAGAAAAATGCAGTTGAGAAGTCGAGACATGGAATGGTGGATGCGAAGAAGACAGTTGCCGTTTCGTTTGAGACAAAGGGTTCGTCATTACGAACACCAAAGATGGACGGTTCTAGGAGGAGAAGACGAGATGTCTCTGATCAAGGACTTACCCGATGGCCTTCGTCGAGACATTAAACGATTTCTTTGCTTGGACCTCATCAAACATGTACCTCTATTCTATGACATGGACGATCTGATTCTCGATAACATCTGTGATAGGGTTACCCCACTCGTCTTCTCCAAAGATGAAAAGATTATAAGAGAAGGAGATCCAGTGGCAAGAATGCTATTCATCATTCGTGGGCGAATCAAGCGCTGCCAAAGCCTCAGCAAGGGAGTGATAGCCACAAGCATGCTTGACCAGGGAGGATTCTTTGGCGACGAACTCTTATCCTGGTGCCTCCGTCGCCCTTTCATGGATCGGCTTCCAGCCTCATCAGCAACATTTGTGTGTGTCGAACCAACAGAAGCATTTGGCCTCGATGCAGGCCATCTTCGATTCATCACTGACCATTTTCGCTATAAGTTTGCCAACGAGAGGCTGAAAAGAACAGCAAGATACTACTCTTCCAATTGGAGAACATGGGCTGCAGTGATTATACAATTTGCATATCATCGTCACAAGTCAAAAATTCAAGGTCCGGTGATAATTGTGCCGGAGATTGAAGATTCCGACCGTCGGCTTTTGCAGTATGCTGCCATGTTCATGTCAATTAGACCACATGACCATCTTGAATAA 2040 49.22 VDDADSNSDDDPVSSPAECYACTQVGVPAFHSTSCDRANQPEWEASAGSSLVPIKNKKEQSPETRTQRPSGFFGALRDPRSKQVRGWNRAILLARGLALAVDPLFFYALSIGRGGTPCLFMDGGLAAIVTVIRTCVDVLHLWHMWFQFRTAYVSRESLVVGCGKLVWDARAVALHYLRSFKGFWFDAFVIIPVPQAVFWLVLPKLIREERIKVIMTVLLMMFMFQFLPKVYHCIYTMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLQQHCRRHGCNLSLSCSEEICYQSLLPANSVGNFCGGNSTATAIRKPLCLDEHGSFRYGIYQWALPVISSNSVVVKVLYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICLVLSGLMLFTLLIGNIQVFLHSVMAKKRKMQLRSRDMEWWMRRRQLPFRLRQRVRHYEHQRWTVLGGEDEMSLIKDLPDGLRRDIKRFLCLDLIKHVPLFYDMDDLILDNICDRVTPLVFSKDEKIIREGDPVARMLFIIRGRIKRCQSLSKGVIATSMLDQGGFFGDELLSWCLRRPFMDRLPASSATFVCVEPTEAFGLDAGHLRFITDHFRYKFANERLKRTARYYSSNWRTWAAVIIQFAYHRHKSKIQGPVIIVPEIEDSDRRLLQYAAMFMSIRPHDHLE 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10686813 10690148 + Bpe004761.1 Bpe11g01439 111584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01439 679 SMART cnmp_10 492 618 IPR000595 -
Bpe11g01439 679 ProSiteProfiles cAMP/cGMP binding motif profile. 492 571 IPR000595 -
Bpe11g01439 679 CDD CAP_ED 492 602 IPR000595 -
Bpe11g01439 679 Gene3D Helix hairpin bin 418 483 - -
Bpe11g01439 679 MobiDBLite consensus disorder prediction 44 72 - -
Bpe11g01439 679 Gene3D Jelly Rolls 490 608 IPR014710 -
Bpe11g01439 679 SUPERFAMILY cAMP-binding domain-like 419 606 IPR018490 -
Bpe11g01439 679 SUPERFAMILY Voltage-gated potassium channels 79 413 - -
Bpe11g01439 679 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 8 679 - -
Bpe11g01439 679 Gene3D - 118 416 - -
Bpe11g01439 679 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 679 - -
Bpe11g01439 679 Pfam Ion transport protein 87 410 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00818 Bpe-Chr3:28141727 Bpe11g01439 Bpe-Chr11:10686813 0 dispersed
Bpe11g01439 Bpe-Chr11:10686813 Bpe01g00647 Bpe-Chr1:4382640 4.24E-124 dispersed
Bpe11g01439 Bpe-Chr11:10686813 Bpe12g00381 Bpe-Chr12:9134036 2.53E-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01439 K05391 - jre:108987412 1122.84