Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01442 ATGGACAAGAAGGGAGAATCTGGAAGAGCAGCGGCGCCACCACGGCCGACTATAACTTTACCTCCTCGGCCTTCTATGGAGGCTTTGTTTACAGGCGGGCCTGGAGCTAGTCCTGGTCCTATGACTCTGGTTTCCAGCTTTTTCGCCGACAACCAAAGCGACTCCCCGGACTTCCGCTCGTTTTCTCAATTACTTGCCGGAGCCATGGGATCACCTATGGCTATGGGTTTCTTTGGATCCAATACAACCCAGAATTCTTCTTTCAAGGAAGAAGGTGGTTTGGAGAAGGAGCTGGGGTTTAAGCAGAGTAGGCCGGTGAATTTGGTCGTCGCTCGGTCTCCAATGTTTAGAGTTCCTCCTGGTTTGAGTCCCTCCGGGTTGCTTAACTCACCAGGGTTCTTTTCGCCTCAGGTAGCAATAGCTTGTACTGTTTGTCTTTCGACTTATTCATTTGTTTGTTCTCCTATGCAGAGTCCCTTTGGAATGTCCCACCAGCAGGTTCTTGCTCAGGTTACCGCTCAAGCTGCACTAGCTCAGTCTCAAATGCACGGGCAAGCGCCAGTAGATTATCCACCTGCTTCAGCCCCCCCAACGGATTCATTGATACAACACCCATCATTTACTGTGGATGAAGCTTCTCATCAGTCAATGTCAGATCCCAAAAGTTCCATGATGGAGTCAGCAGAGGTTTCTCATTCTGATAGGAAATATCAACCTCCCGCGGATAAACCTGCAGATGATGGATACAACTGGAGGAAATATGGTCAGAAGCAGGTTAAGGGAAGTGAATTTCCAAGAAGCTATTATAAATGCACGCATCAGAAATGCCCAGTCAAAAAGAAGGTGGAGCGATCACCTGATGGCCAAATTACTGAAATTATCATCAAAGGGCAGCACAATCATGAACCCCCTCAATCCAATAAACGTTCAAAAGATGGCGGTGAAGCCACTGCCCTTGTACATACTCTCCCTAAGTCAGAATTTGGTTCGCATATTTATGGTGGAAATGTTAATAAAACAAGTGAAATTGTGCAAGTGGGGTTTAGTGATAGTGAAGAATTATGTGAAACAGAGATAACAGAAGACAGGGACTTTGATGAGCCTAATCCAAAAAGGCAGAACATAGATGCGGGAACATCTGGGGGTTCTTTGTCACACAAGACACTTACCGAACCAAAAATTATTGTGCAAACACGAAGTGAGGTTGATCTTTTGGACGATGGATATCGATGGCGAAAGTATGGCCAAAAGTTGGTCAAAGGAAATCCTTATCCAAGGAGCTACTACAGATGCACTTTCGTTGGATGCAATGTTCGTAAGCACGTTGAGAGAGCCTCAACAGACCCCAAGGCTGTAATAACGACATATGAAGGAAAACACTGTCACGATGTTCCTGCAGCTAGAAATAGTAGCCACAACACATCCAACAACAATACACTGCAAATTAAACCTCAAAGGGCGGTGGCCCAAAAACACCAATTACTCAAAGAGATGGATTTTGGAAGTAAGGAACAGGGACCCATTGTTTTGCAGCTTAAAGAAGAGCAAATCACAGTATAA 1560 45.51 MDKKGESGRAAAPPRPTITLPPRPSMEALFTGGPGASPGPMTLVSSFFADNQSDSPDFRSFSQLLAGAMGSPMAMGFFGSNTTQNSSFKEEGGLEKELGFKQSRPVNLVVARSPMFRVPPGLSPSGLLNSPGFFSPQVAIACTVCLSTYSFVCSPMQSPFGMSHQQVLAQVTAQAALAQSQMHGQAPVDYPPASAPPTDSLIQHPSFTVDEASHQSMSDPKSSMMESAEVSHSDRKYQPPADKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHQKCPVKKKVERSPDGQITEIIIKGQHNHEPPQSNKRSKDGGEATALVHTLPKSEFGSHIYGGNVNKTSEIVQVGFSDSEELCETEITEDRDFDEPNPKRQNIDAGTSGGSLSHKTLTEPKIIVQTRSEVDLLDDGYRWRKYGQKLVKGNPYPRSYYRCTFVGCNVRKHVERASTDPKAVITTYEGKHCHDVPAARNSSHNTSNNNTLQIKPQRAVAQKHQLLKEMDFGSKEQGPIVLQLKEEQITV 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10705132 10708379 + Bpe004764.1 Bpe11g01442 111587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01442 519 SUPERFAMILY WRKY DNA-binding domain 243 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe11g01442 519 MobiDBLite consensus disorder prediction 359 386 - -
Bpe11g01442 519 MobiDBLite consensus disorder prediction 1 33 - -
Bpe11g01442 519 SMART WRKY_cls 405 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g01442 519 SMART WRKY_cls 245 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g01442 519 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 518 IPR044810 GO:0003700
Bpe11g01442 519 MobiDBLite consensus disorder prediction 228 250 - -
Bpe11g01442 519 Gene3D WRKY domain 390 466 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe11g01442 519 Gene3D WRKY domain 235 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe11g01442 519 PANTHER WRKY PROTEIN 10 518 - -
Bpe11g01442 519 ProSiteProfiles WRKY domain profile. 400 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g01442 519 ProSiteProfiles WRKY domain profile. 240 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g01442 519 MobiDBLite consensus disorder prediction 199 227 - -
Bpe11g01442 519 MobiDBLite consensus disorder prediction 182 251 - -
Bpe11g01442 519 MobiDBLite consensus disorder prediction 295 315 - -
Bpe11g01442 519 SUPERFAMILY WRKY DNA-binding domain 397 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe11g01442 519 Pfam WRKY DNA -binding domain 406 462 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g01442 519 Pfam WRKY DNA -binding domain 246 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe11g00067 Bpe11g01442 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00889 Bpe-Chr10:14629200 Bpe11g01442 Bpe-Chr11:10705132 2.83E-111 dispersed
Bpe08g00665 Bpe-Chr8:7088375 Bpe11g01442 Bpe-Chr11:10705132 4.91E-14 transposed
Bpe11g00067 Bpe-Chr11:458552 Bpe11g01442 Bpe-Chr11:10705132 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22109 PF03106 WRKY 7.90E-25 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01442 - - csv:101223114 674.085