Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01458 | ATGGAAATGGCTGTGACGAATAGTGCAACTAAGTCGCCGGAAGGCGAGCCAGATCGAACGGCGGCCGAGGTTTTACCGATTAAGGCTTTACCCTTTAGTAATGGTGTTTTGAAGAGGCAGAATCCTCAGAGTCATCATCATCATCACCGCCTGAGCTCTGCCGCTAACTCCGCCGTCGTTTCCTTCAAAGAATGTCTGAAAAACCATGCGGCTAGCTTAGGAGCTCACGCTTTAGATGGGTGTGGAGAATTCATGCCTTCTTCTGCAACTTCTTCCGATCCCACTCTTTTAAAATGCGCCGCCTGCGGATGTCACCGGAACTTTCACCGCCGGGAGCCCGACGACAGTTTTCCAGCCCTTGCCACGCATGTAATCGAGTACCAGCCACACCACCGCCACCACCCGCCGCAGCCAATTAGTCGGAGTCCAAATTCTGCGTCACCTCCACCGATCTCCTCCTCCTACTACCCTTCAGCTCCCCACATGCTTTTGGCTCTATCGGCAGGGCTGTCTATTCCTCCGGAAAGTGCACCGGGGGCTAACCGGTGTTCAAACGGGAGGAAGCGATTCAGAACCAGATTCACTCCGGACCAGAAAGAGAAAATGCACCAGTTTGCAGAAAGTATGGGATGGAGGATGCAGAAGAGGGATGAAGAAATGGTTCGAGAGTTTTGCAATGAGATTGGTATAGATAAAGGAGTTTTGAAAGTATGGATGCACAATAACAAAAACTCATCTTCGAAGAAGGATGTTAATGGGGGAACGAATATTCCGGAACTCCACAACAGCAACATCGGCGGGCATATAAATCTCTACGATGATGATGAACGGGTACATGCCGCCATTAATGTCTCTTCTTCTTCTTCCTGA | 870 | 50.11 | MEMAVTNSATKSPEGEPDRTAAEVLPIKALPFSNGVLKRQNPQSHHHHHRLSSAANSAVVSFKECLKNHAASLGAHALDGCGEFMPSSATSSDPTLLKCAACGCHRNFHRREPDDSFPALATHVIEYQPHHRHHPPQPISRSPNSASPPPISSSYYPSAPHMLLALSAGLSIPPESAPGANRCSNGRKRFRTRFTPDQKEKMHQFAESMGWRMQKRDEEMVREFCNEIGIDKGVLKVWMHNNKNSSSKKDVNGGTNIPELHNSNIGGHINLYDDDERVHAAINVSSSSS | 289 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10824731 | 10825600 | + | Bpe004779.1 | Bpe11g01458 | 111603 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01458 | 289 | Gene3D | - | 175 | 249 | - | - | |
Bpe11g01458 | 289 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Bpe11g01458 | 289 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 187 | 244 | IPR006455 | - | |
Bpe11g01458 | 289 | MobiDBLite | consensus disorder prediction | 129 | 153 | - | - | |
Bpe11g01458 | 289 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 62 | 112 | IPR006456 | - | |
Bpe11g01458 | 289 | SUPERFAMILY | Homeodomain-like | 176 | 248 | IPR009057 | - | |
Bpe11g01458 | 289 | PANTHER | HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN | 4 | 265 | - | - | |
Bpe11g01458 | 289 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 4 | 265 | - | - | |
Bpe11g01458 | 289 | Pfam | ZF-HD protein dimerisation region | 60 | 113 | IPR006456 | - | |
Bpe11g01458 | 289 | CDD | homeodomain | 188 | 241 | IPR001356 | GO:0003677 | |
Bpe11g01458 | 289 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 62 | 112 | IPR006456 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe11g00081 | Bpe11g01458 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g01458 | Bpe-Chr11:10824731 | Bpe13g00443 | Bpe-Chr13:11967088 | 8.69E-49 | dispersed | |
Bpe11g00081 | Bpe-Chr11:544671 | Bpe11g01458 | Bpe-Chr11:10824731 | 1.90E-122 | wgd | |
Bpe11g01458 | Bpe-Chr11:10824731 | Bpe14g00177 | Bpe-Chr14:2140419 | 1.79E-89 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22112 | PF04770 | ZF-HD_dimer | 6.30E-28 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01458 | - | - | jre:108984667 | 325.865 |