Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01458 ATGGAAATGGCTGTGACGAATAGTGCAACTAAGTCGCCGGAAGGCGAGCCAGATCGAACGGCGGCCGAGGTTTTACCGATTAAGGCTTTACCCTTTAGTAATGGTGTTTTGAAGAGGCAGAATCCTCAGAGTCATCATCATCATCACCGCCTGAGCTCTGCCGCTAACTCCGCCGTCGTTTCCTTCAAAGAATGTCTGAAAAACCATGCGGCTAGCTTAGGAGCTCACGCTTTAGATGGGTGTGGAGAATTCATGCCTTCTTCTGCAACTTCTTCCGATCCCACTCTTTTAAAATGCGCCGCCTGCGGATGTCACCGGAACTTTCACCGCCGGGAGCCCGACGACAGTTTTCCAGCCCTTGCCACGCATGTAATCGAGTACCAGCCACACCACCGCCACCACCCGCCGCAGCCAATTAGTCGGAGTCCAAATTCTGCGTCACCTCCACCGATCTCCTCCTCCTACTACCCTTCAGCTCCCCACATGCTTTTGGCTCTATCGGCAGGGCTGTCTATTCCTCCGGAAAGTGCACCGGGGGCTAACCGGTGTTCAAACGGGAGGAAGCGATTCAGAACCAGATTCACTCCGGACCAGAAAGAGAAAATGCACCAGTTTGCAGAAAGTATGGGATGGAGGATGCAGAAGAGGGATGAAGAAATGGTTCGAGAGTTTTGCAATGAGATTGGTATAGATAAAGGAGTTTTGAAAGTATGGATGCACAATAACAAAAACTCATCTTCGAAGAAGGATGTTAATGGGGGAACGAATATTCCGGAACTCCACAACAGCAACATCGGCGGGCATATAAATCTCTACGATGATGATGAACGGGTACATGCCGCCATTAATGTCTCTTCTTCTTCTTCCTGA 870 50.11 MEMAVTNSATKSPEGEPDRTAAEVLPIKALPFSNGVLKRQNPQSHHHHHRLSSAANSAVVSFKECLKNHAASLGAHALDGCGEFMPSSATSSDPTLLKCAACGCHRNFHRREPDDSFPALATHVIEYQPHHRHHPPQPISRSPNSASPPPISSSYYPSAPHMLLALSAGLSIPPESAPGANRCSNGRKRFRTRFTPDQKEKMHQFAESMGWRMQKRDEEMVREFCNEIGIDKGVLKVWMHNNKNSSSKKDVNGGTNIPELHNSNIGGHINLYDDDERVHAAINVSSSSS 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10824731 10825600 + Bpe004779.1 Bpe11g01458 111603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01458 289 Gene3D - 175 249 - -
Bpe11g01458 289 MobiDBLite consensus disorder prediction 1 20 - -
Bpe11g01458 289 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 187 244 IPR006455 -
Bpe11g01458 289 MobiDBLite consensus disorder prediction 129 153 - -
Bpe11g01458 289 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 62 112 IPR006456 -
Bpe11g01458 289 SUPERFAMILY Homeodomain-like 176 248 IPR009057 -
Bpe11g01458 289 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 4 265 - -
Bpe11g01458 289 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 4 265 - -
Bpe11g01458 289 Pfam ZF-HD protein dimerisation region 60 113 IPR006456 -
Bpe11g01458 289 CDD homeodomain 188 241 IPR001356 GO:0003677
Bpe11g01458 289 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 62 112 IPR006456 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe11g00081 Bpe11g01458 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01458 Bpe-Chr11:10824731 Bpe13g00443 Bpe-Chr13:11967088 8.69E-49 dispersed
Bpe11g00081 Bpe-Chr11:544671 Bpe11g01458 Bpe-Chr11:10824731 1.90E-122 wgd
Bpe11g01458 Bpe-Chr11:10824731 Bpe14g00177 Bpe-Chr14:2140419 1.79E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22112 PF04770 ZF-HD_dimer 6.30E-28 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01458 - - jre:108984667 325.865