Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01467 TCTTCTTTCCAGGTTACACAGCACAAGAAATCAGTCCGTCAGAAGACTTTGCCCCATGAAAGTGCAATCTCTCATACCCAAGATTCCTTGGGTGGAGGGGGAATAAGATCAGCCAATTCTAAAGGAAAAAGGACTGCATCCACTGATTCTTCCTTAGATCAACAAAACAATGGGTCTGTTAGTTCACTTGGCCATGGGGCAAATTCAACTGGACGAAAAGCCCAGGTAATGAATGCTAATCATTTGCTGAACTTCCATTATGATACCATTTCACGTCCTCAACCAAGAGCTCCTCCTCCAAGAAGGCAGAAATTAAAGCCATACAACAAAGGTCTATTTCTTCAGGCTAATTATAAATTTGTGGTATTAGACTCGGGTAATTATTTACCTGAGTCTTTGGATCCAGATAAAATGTTGCATTGGGATGAGATTATATGTGTGAGGTACTCAACACCAACTCTCATTCGGTGTCCTATTTGTTTGGAATATCCCCTATGTCCTCAAATTACCACATGTGGGCATATTTTTTGTTTCCCATGTATTCTACGTCACTTGTTAATGGGAGAAGAGGATCATAAAGGTGACTGTTGGAAAAAGTGTCCCTTGTGTTTTGTTATGATATCTCCAAAAGATTTATATACCGTGTACATTGAGATTGTTGAACCGTTTTCTGTTGGTGATACTATATCATTCACGCTTTTGAACCGGCAAAAAGATTCATTTGTTATATCACATACGCATGGGCAAGACAATAAAGGCATACCATTTGATGTTGGCGATGAAATTTACGATCGCTTTTCGAAGTTCTCATTTACATTGGATGTGAATCTCTCTGTCAGAAAAGCAAAGTCAGATCTAGAAGGATGGTTGGTCAGAGCAGAAGCAGGTCTTGTTGATGACCTAGAGAAGCTTCCATATGTTTGTGCTGCAATCGAGCAACTAGATCAGAGGAAAATGCATTTGAATGAGCATCTGGCTTCTGTGAAGAGTCAGTCCTGTCAAAATATTGACTCTCAGGGAGAAACTCATTCAGTTAAGTCCAATGCTGATGTTGATAGCTCTGGTTGTGGAACACCCTGTTTTGGAGATGCATTTTTGGCTTCTGAATTCAATGAACAAAGCGCGAGGTATAATAATGCAATCACTTTGAATGGTACTTCTTTGGAGCAAACGATGGATATGGGTGAATCATTAGAAGGTCGAGAAGTTGTTTTATCTTCTTCATACGAGGAAGATAGTATCGCTCATGGGACCTCAAATCAATGTAGATCATTAGAAAAGAAAGAGTCATACAATTTCTACCAGGCAACCGATGGGCAATACATCATTCTTCATCCACTGAATGTTAAGTGTCTTCTACACCATTATGGAAGCTACGCCATGCTTCCAGACAGGATAAGTGGAAGAATCTTACAGTTGGAGACAGTGACTCAGTCTGAAGCCACTAGGAGGCGCTATCGCTATCTAAGTCATTTTTCTTTGACAACTACCTTCCAGCTTTGCGAAGTTGATTTGAGTGAATTATTGCCTCCTGCATCTCTCATTCCGTTTAGGGAGGAAATAAAGAGGCGTGAAAAGCAGAGGAAACAAATTGCTAAGAAGGAATATAAGGAGAAGATCAAGGCAGAAACTGCAGCAACATATTCTATAGTTGATTTACATAACTTTGGACATTTCATTCATGATGATACCCCATCTTTCTCTATGGATGATTTTGAAGCTTTGGGAAGTTCTGGGGGTACATCATCCAGCCCTCCAATTGTGGTGGATAGGAAACTCTTTTCAAATGTTACAAAGCTCGGGTTTGCGGCGGGGCACGATAGTCCGCAGTTGAAGATGGACGAAACAAAGTCACCGAGTAATCAACCGAACATGGCCTCATTGATGACAACTCTCATTGTGGTGATGATAGGGACGGGGAATGTATCGTTTGCCAATGTTATATCGAGAGCCAAGAATGATGAAACCCCAGATGCACCACCCAAGAATAGTGAATTGGGGAAAAGGGGGAAGAAACCGAGTAGAGTTCTTCTATCAACGTCGGGAGGTCGGAGATACTGA 2061 41.15 SSFQVTQHKKSVRQKTLPHESAISHTQDSLGGGGIRSANSKGKRTASTDSSLDQQNNGSVSSLGHGANSTGRKAQVMNANHLLNFHYDTISRPQPRAPPPRRQKLKPYNKGLFLQANYKFVVLDSGNYLPESLDPDKMLHWDEIICVRYSTPTLIRCPICLEYPLCPQITTCGHIFCFPCILRHLLMGEEDHKGDCWKKCPLCFVMISPKDLYTVYIEIVEPFSVGDTISFTLLNRQKDSFVISHTHGQDNKGIPFDVGDEIYDRFSKFSFTLDVNLSVRKAKSDLEGWLVRAEAGLVDDLEKLPYVCAAIEQLDQRKMHLNEHLASVKSQSCQNIDSQGETHSVKSNADVDSSGCGTPCFGDAFLASEFNEQSARYNNAITLNGTSLEQTMDMGESLEGREVVLSSSYEEDSIAHGTSNQCRSLEKKESYNFYQATDGQYIILHPLNVKCLLHHYGSYAMLPDRISGRILQLETVTQSEATRRRYRYLSHFSLTTTFQLCEVDLSELLPPASLIPFREEIKRREKQRKQIAKKEYKEKIKAETAATYSIVDLHNFGHFIHDDTPSFSMDDFEALGSSGGTSSSPPIVVDRKLFSNVTKLGFAAGHDSPQLKMDETKSPSNQPNMASLMTTLIVVMIGTGNVSFANVISRAKNDETPDAPPKNSELGKRGKKPSRVLLSTSGGRRY 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10927678 10930825 + Bpe004788.1 Bpe11g01467 111612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01467 686 MobiDBLite consensus disorder prediction 655 672 - -
Bpe11g01467 686 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 218 IPR013083 -
Bpe11g01467 686 MobiDBLite consensus disorder prediction 652 686 - -
Bpe11g01467 686 CDD RING-HC_RNF10 157 204 - -
Bpe11g01467 686 Coils Coil 311 331 - -
Bpe11g01467 686 Pfam Zinc finger, C3HC4 type (RING finger) 157 203 IPR018957 GO:0046872
Bpe11g01467 686 MobiDBLite consensus disorder prediction 1 71 - -
Bpe11g01467 686 ProSitePatterns Zinc finger RING-type signature. 172 181 IPR017907 -
Bpe11g01467 686 PANTHER RING FINGER 10 FAMILY MEMBER 34 683 IPR039739 -
Bpe11g01467 686 SMART ring_2 157 203 IPR001841 -
Bpe11g01467 686 ProSiteProfiles Zinc finger RING-type profile. 157 203 IPR001841 -
Bpe11g01467 686 SUPERFAMILY RING/U-box 152 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01467 Bpe-Chr11:10927678 Bpe15g00363 Bpe-Chr15:15181409 1.90E-07 dispersed
Bpe11g01467 Bpe-Chr11:10927678 Bpe14g00655 Bpe-Chr14:5284151 9.48E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01467 - - pxb:103966589 753.436