Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01485 ATGGGTGAAACTAAGTCGACTGAAATTAAAGATTTTCAGATTACCGTAGCAGATAAAGAAGAGGGGAAGAAGCAATTAGCTCCAAAAAGAAGCTCGAATAAAGACAGACACACTAAGGTAGATGGTCGAGGAAGAAGGATACGGATGCCAGCTCTGTGCGCAGCAAGAATTTTCCAATTGACAAGAGAATTAGGTCATAAATCAGATGGAGAAACCATCCAGTGGCTCTTGCAACAGGCGGAACCGTCGATAATTGGAGCTACCGGAACCGGGACTATCCCGGCTTCCGCTTTGGCCGCCTCCGGAGTATCTTTTTCACAGCAAGGGACCTCTTTATCAACCGGATTGCACCAAAAGATCGAGGATGATTTTGGGGGGTCAGGAAGTATGACCAGTTGGGCTTTGATGGGTGACAATTTGGGGAGACCACCGTCCCATATGGATTCAGGGCTATGGCCTCCGATCAGTGGCTTTGAGCCTAGGCCATCGTCTTCTCCAAACAGAAATTTGACGTCAGAGAGTGCAAATTATCTTCAGAAGATCGTTCCCGGGCTTGACTTGCCACTCGGAAATATGGGTACGATGACTTTCACCTCGATTCTGAGTGGCAATAGTCAGCATCTGCCGGAACTGGGACTCGGGCTTTCCCCAGAAGGTCACGTCGGAGTTTTGAACCCACAGGCCTTGAGCCAGTTTTACCAGCAGATGAAGCAGGCTAGAGTTCAAACGCCCCATCACCTAGCTTCTCCCAAGGATGACTCTCAAGATTCAGACTCAGCCAACTAG 786 48.85 MGETKSTEIKDFQITVADKEEGKKQLAPKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIGATGTGTIPASALAASGVSFSQQGTSLSTGLHQKIEDDFGGSGSMTSWALMGDNLGRPPSHMDSGLWPPISGFEPRPSSSPNRNLTSESANYLQKIVPGLDLPLGNMGTMTFTSILSGNSQHLPELGLGLSPEGHVGVLNPQALSQFYQQMKQARVQTPHHLASPKDDSQDSDSAN 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11046775 11047560 - Bpe004807.1 Bpe11g01485 111630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01485 261 Pfam TCP family transcription factor 32 119 IPR017887 -
Bpe11g01485 261 MobiDBLite consensus disorder prediction 144 171 - -
Bpe11g01485 261 ProSiteProfiles TCP domain profile. 33 87 IPR017887 -
Bpe11g01485 261 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 4 251 - -
Bpe11g01485 261 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 251 IPR005333 GO:0003700
Bpe11g01485 261 MobiDBLite consensus disorder prediction 237 261 - -
Bpe11g01485 261 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01485 Bpe-Chr11:11046775 Bpe14g01350 Bpe-Chr14:10779890 1.31E-102 dispersed
Bpe11g01485 Bpe-Chr11:11046775 Bpe13g01416 Bpe-Chr13:19402438 7.17E-39 wgd
Bpe11g01485 Bpe-Chr11:11046775 Bpe09g00550 Bpe-Chr9:14289329 7.07E-154 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22118 PF03634 TCP 4.40E-31 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01485 - - jre:108987051 365.54