Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01486 | ATGGAGAGTTATCAGGTTTTCTTCCCTTGCTCGTCGAGAGCAATGGAAGCTTATGCTCCATTATCCTCAGACAAGGAAAACGTTTACCGTGAAAATTCAGGTGGGTTTTCTGGGTTGGGGGCCGGAGTTTCAGCAAAAGCTTCTTCAGATCAGAGCGGATCGAGCTCTTTCGGGTCGGAAGAAAGCGGCGAAAAAGTGGTCAAGAAGAAGGGGGAGAAGAAGATTAGGAGGCCTAGGCATGCTTTTCAGACGAGAAGCCAGGTTGATATACTTGATGATGGTTATCGTTGGAGAAAATATGGTCAGAAGGTAGTGAAGAACAACAAATTTCCCAGGAGCTACTACAAATGCACGCATCAAGGATGCAACGTGAAGAAGCAAGTCCAACGCCTAACAAAAGACGAAGGGGTTGTCGTGACTACCTATGAAGGAGTCCATTCCCATCCCATTGACAAACCCTCTGATAACTTTGAACATATCTTGAGTCAAATGCAAATTTACACATCACACGTTTAG | 516 | 45.16 | MESYQVFFPCSSRAMEAYAPLSSDKENVYRENSGGFSGLGAGVSAKASSDQSGSSSFGSEESGEKVVKKKGEKKIRRPRHAFQTRSQVDILDDGYRWRKYGQKVVKNNKFPRSYYKCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHSHPIDKPSDNFEHILSQMQIYTSHV | 171 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11058563 | 11059547 | + | Bpe004808.1 | Bpe11g01486 | 111631 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01486 | 171 | MobiDBLite | consensus disorder prediction | 44 | 61 | - | - | |
Bpe11g01486 | 171 | SMART | WRKY_cls | 91 | 150 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g01486 | 171 | ProSiteProfiles | WRKY domain profile. | 86 | 151 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g01486 | 171 | Gene3D | WRKY domain | 76 | 151 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g01486 | 171 | SUPERFAMILY | WRKY DNA-binding domain | 83 | 150 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g01486 | 171 | Pfam | WRKY DNA -binding domain | 92 | 149 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g01486 | 171 | PANTHER | WRKY TRANSCRIPTION FACTOR 75-RELATED | 56 | 167 | - | - | |
Bpe11g01486 | 171 | MobiDBLite | consensus disorder prediction | 40 | 81 | - | - | |
Bpe11g01486 | 171 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 56 | 167 | IPR044810 | GO:0003700 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g01307 | Bpe11g01486 | CCT | |
Bpe02g01307 | Bpe11g01486 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g01486 | Bpe-Chr11:11058563 | Bpe13g00817 | Bpe-Chr13:14475450 | 5.09E-66 | dispersed | |
Bpe11g01486 | Bpe-Chr11:11058563 | Bpe10g00506 | Bpe-Chr10:12250802 | 7.44E-34 | transposed | |
Bpe11g01486 | Bpe-Chr11:11058563 | Bpe03g00493 | Bpe-Chr3:24696111 | 6.69E-34 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22119 | PF03106 | WRKY | 1.10E-25 | CL0274 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01486 | - | - | qsu:112033440 | 213.001 |