Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01486 ATGGAGAGTTATCAGGTTTTCTTCCCTTGCTCGTCGAGAGCAATGGAAGCTTATGCTCCATTATCCTCAGACAAGGAAAACGTTTACCGTGAAAATTCAGGTGGGTTTTCTGGGTTGGGGGCCGGAGTTTCAGCAAAAGCTTCTTCAGATCAGAGCGGATCGAGCTCTTTCGGGTCGGAAGAAAGCGGCGAAAAAGTGGTCAAGAAGAAGGGGGAGAAGAAGATTAGGAGGCCTAGGCATGCTTTTCAGACGAGAAGCCAGGTTGATATACTTGATGATGGTTATCGTTGGAGAAAATATGGTCAGAAGGTAGTGAAGAACAACAAATTTCCCAGGAGCTACTACAAATGCACGCATCAAGGATGCAACGTGAAGAAGCAAGTCCAACGCCTAACAAAAGACGAAGGGGTTGTCGTGACTACCTATGAAGGAGTCCATTCCCATCCCATTGACAAACCCTCTGATAACTTTGAACATATCTTGAGTCAAATGCAAATTTACACATCACACGTTTAG 516 45.16 MESYQVFFPCSSRAMEAYAPLSSDKENVYRENSGGFSGLGAGVSAKASSDQSGSSSFGSEESGEKVVKKKGEKKIRRPRHAFQTRSQVDILDDGYRWRKYGQKVVKNNKFPRSYYKCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHSHPIDKPSDNFEHILSQMQIYTSHV 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11058563 11059547 + Bpe004808.1 Bpe11g01486 111631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01486 171 MobiDBLite consensus disorder prediction 44 61 - -
Bpe11g01486 171 SMART WRKY_cls 91 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g01486 171 ProSiteProfiles WRKY domain profile. 86 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g01486 171 Gene3D WRKY domain 76 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe11g01486 171 SUPERFAMILY WRKY DNA-binding domain 83 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe11g01486 171 Pfam WRKY DNA -binding domain 92 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g01486 171 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 56 167 - -
Bpe11g01486 171 MobiDBLite consensus disorder prediction 40 81 - -
Bpe11g01486 171 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 56 167 IPR044810 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01307 Bpe11g01486 CCT
Bpe02g01307 Bpe11g01486 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01486 Bpe-Chr11:11058563 Bpe13g00817 Bpe-Chr13:14475450 5.09E-66 dispersed
Bpe11g01486 Bpe-Chr11:11058563 Bpe10g00506 Bpe-Chr10:12250802 7.44E-34 transposed
Bpe11g01486 Bpe-Chr11:11058563 Bpe03g00493 Bpe-Chr3:24696111 6.69E-34 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22119 PF03106 WRKY 1.10E-25 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01486 - - qsu:112033440 213.001