Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01487 ATGGACTGGGACGGGAGGAAATTTGGTTGGGAGGAAACTGAAACTGAGCTGAGAGAAGGTAGAATCAGAGATACCCTTTCAGCAGGACGGGGAAAGAATATCGGAAACGGAGAAATCTTGTTGGGTAATGGAGGAAACAAATCGGAAGAGAAACCGAAGAAAGTGGTGAGAAAATCAAGGGTTTCTGCGCCCAGATCGCCAAAAGGGGCGAACAATCTGACGTGCTTGGTGGATGGTTGCGAGGAAGATTTGAGCCACTGCAAGGACTATCATCGCCGGCATAGGGTCTGCGAACAGCATTCCAAGATCCCCGTCGTATTCGTGAGAGGCGAAGAGAAGAGATTCTGCCAGCAGTGTAGCAGATTCCATTCTCTGGGTGAGTTTGATGAGGCGAAGAGAAGCTGCCGGAAACGTCTTGACGGGCACAACCGGCGTCGGAGGAAGGGTCAGCCGGAATCCCTATACTTGACCTCCACGGATTTTCTATCCAATTTCAAAGGTCCTAAAATCCTGCAATTCAGCAGTCCACAGCTCAATATGCAATCCGAGGATGTAAGGATTGCTTTGCCTCCTTATGTAAGGAAACCAGAGGCAGAAGCCATAGGAAATAATAGTCAAAAATGGATGCGAGTAATCGACCCAAACACGCCTCGGGATCTATCCTTTGCCCCTATCTGCAATGCAGGAGATAAACAATTCTCTTTGAAGCAGAAAAGCAATCAGAAAGAAGGCAACCAATCGACCCCTCCAGTGTCAGTCCGCCATCCACTTCCATTTGCAATCGGCTCCTCCCCTGAAAGTGGAAGAGGCAGCCATGGAATTTCACAGCCTGTAGATTCAGGTTGTGCTCTCTATCTTCTGTCATCACAGCCAACACAAGCTTCAGAACTTGGTCTGAGCTGCGTCGATTTTCTTCCCCAAGAGCAGTACTACCCCTGCTTGAAGGAGAGGCCTGCCTTTCCTGAAGATATGGCGTTCCAGACGAGAGGCCATGATGGCTTCTTCGAAGCTCAACTCCCAACTTCTTGGGAGTAG 1035 49.37 MDWDGRKFGWEETETELREGRIRDTLSAGRGKNIGNGEILLGNGGNKSEEKPKKVVRKSRVSAPRSPKGANNLTCLVDGCEEDLSHCKDYHRRHRVCEQHSKIPVVFVRGEEKRFCQQCSRFHSLGEFDEAKRSCRKRLDGHNRRRRKGQPESLYLTSTDFLSNFKGPKILQFSSPQLNMQSEDVRIALPPYVRKPEAEAIGNNSQKWMRVIDPNTPRDLSFAPICNAGDKQFSLKQKSNQKEGNQSTPPVSVRHPLPFAIGSSPESGRGSHGISQPVDSGCALYLLSSQPTQASELGLSCVDFLPQEQYYPCLKERPAFPEDMAFQTRGHDGFFEAQLPTSWE 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11061847 11063137 + Bpe004809.2 Bpe11g01487 111632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01487 344 MobiDBLite consensus disorder prediction 33 67 - -
Bpe11g01487 344 SUPERFAMILY SBT domain 74 154 IPR036893 GO:0003677|GO:0005634
Bpe11g01487 344 MobiDBLite consensus disorder prediction 234 252 - -
Bpe11g01487 344 MobiDBLite consensus disorder prediction 234 275 - -
Bpe11g01487 344 Pfam SBP domain 75 148 IPR004333 GO:0003677
Bpe11g01487 344 Gene3D - 66 136 IPR036893 GO:0003677|GO:0005634
Bpe11g01487 344 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 65 299 IPR044817 GO:0003677
Bpe11g01487 344 ProSiteProfiles Zinc finger SBP-type profile. 72 149 IPR004333 GO:0003677
Bpe11g01487 344 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 65 299 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe09g00547 Bpe11g01487 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01487 Bpe-Chr11:11061847 Bpe12g00474 Bpe-Chr12:10506324 7.35E-39 dispersed
Bpe11g01487 Bpe-Chr11:11061847 Bpe07g00895 Bpe-Chr7:14987920 3.83E-45 wgd
Bpe11g01487 Bpe-Chr11:11061847 Bpe09g00547 Bpe-Chr9:14250979 7.91E-154 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22120 PF03110 SBP 6.40E-30 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01487 - - qlo:115976416 255.373