Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe11g01498 | ATGGATTCTGCAGAGAGGAACGTCAGACGTAGCATGGAAGCTGGAGCTCAAGAAGAAGAAGAAGAAGAAGAAGAAGACAGCAACGACCCAGAAAGCATGCCACTGAATCAGCCACTCCTCAAAAGAAACCGAACACTCTCGTCCAGTCCACTCGCCATCATTGGATCCAAAGTTTCCTACATAGAAAGCTTGGATTATGAGATCAACGAGAACGACTTGTTCAAACATGATTGGAGAAGCAGATCCAGAATTCAAGTACTACAATATATATTCTTGAAATGGACACTAGCTTTCCTCGTCGGACTTCTCACTGGAATCATTGCCTCGGTGATCAATCTTGCCATAGAAAACATTGCCGGATACAAGCTTCTTGCCGTTGTCGGCTTCATAGAAGAGGACAGGTTTATGTTGAACAGATATGTAATGGGGTTCGTCTATTTTACCTTAGCAAATTTTCTTCTGACAATGGTTGCTGCCGTGCTGTGCGTGTGCTTCGCATCCACTGCTGCTGGACCTGGAATACCAGAAATCAAAGCTTACCTCAATGGTGTTGATACTCCAAACATGTACGGTGCAACAACATTGATAGTCAAGATAGTTGGAAGCATCGGAGCAGTTGCTGCAGGCCTGGATCTTGGAAAAGAAGGACCTTTGGTGCACATCGGTAGCTGCATTGCTTCCTTACTCGGCCAAGGTGGTCCTGATAAATACCGGATAAAATGGGGATGGATTCGCTATTTCAACAACGACCGGGACCGGAGAGATCTTATAACTTGCGGGGCTTCCTCAGGCGTTTGTGCGGCCTTCAGGGCTCCGGTTGGTGGTGTTTTGTTTTCACTAGAGGAGGTTGCTACGTGGTGGAGGAGTGCATTGCTGTGGAGAACTTTCTTCAGCACAGCAGTGGTGGTGGTAGTGTTGAGAGCATTCATTGAAATATGCAATTCTGGAGAATGTGGTCTTTTTGGAAAAGGAGGGCTTATTATGTTTGATGTAAGCAATGTTTCTCTTAGATATCATGTGATGGACATCATCCCTGCATCTATCATTGGTATCATTGGTGGAGTTCTTGGAAGCCTTTACAACCATCTCCTACACAAGGTTCTAAGACTCTACAATCTCATTAATCAGAAGGGAAAAGTGCATAAGCTCCTTCTCACCATTGTTGTGTCAATCTTCACTTCAGTCTGCCTTTACTGCCTTCCTTTTCTTGCCAAATGCACCCCTTGTGATTCCTCCCTTACTGATTCCACCTGCCCCACAACTGGTCGATCAGGCAATTTCAAACAATTCAACTGCCCAAGTGGCCACTACAATGACCTAGCAACTCTACTTCTTACAACAAACGATGATGCTGTGCGAAATATATTCTCAACCAACACTTCCACAGAATATCACCCTTTGTCTCTTTTAATCTTTTTTGCAGTCTATTGCGTCTTGGGATTAATTACCTTTGGCATTGCTGTGCCATCTGGACTTTTTCTCCCAATTATCTTGATGGGATCTGCTTATGGTCGCTTACTAGGCATGGCTATGGGATCTTATACCAACATTGATCAGGGGCTTTATGCTGTTTTGGGTGCAGCCTCACTCATGGCAGGCTCAATGAGAATGACTGTTTCTCTTTGTGTGATATTCCTTGAACTCACCAACAACCTTCTCTTACTACCCATAACAATGATTGTCCTTCTGATTGCAAAAACTGTAGGAGACAGTTTTAACCCAAGCATCTATGAGATAATTCTGCACTTGAAAGGCTTGCCTTTCTTGGAATCCAATCCAGAGCCATGGATGAGAAATATTACTGTTGGGGAGCTTGTTGATGCAAAGCCAGGCGTGATTACTCTATGCGGCATAGAAAAGGTGGCCCGAATTGTGGATGTGCTAAAGAACACGACACATAATGGTTTCCCTGTAGTGGATGGTGGGGTGGTACTACCTGGGGGAACTGCTGTTGGCGCCACACAACTGCATGGATTAATCCTAAGAACTCACCTGGTTCAGGCGCTGAAAAAAAAGTGGTTCTTGAGACAAAAAAGGAGAACTGAAGATTGGGAAGTGAGAGAAAAGTTTACATGGGTTGATTTGGCAGAGAGAGAACTTAAGATTGAGGAAGTAGCTGTGACAAGTGATGAAATGGAGATGTATGTCGATCTTCATCCTCTTACTAACACAACGCCTTACACAGTGGTAGAAAGCATGTCAGTGGCAAAAGCTTTGGTGCTTTTCAGACAAGTAGGTCTACGTCATTTGATTGTCGTACCAAATTATCAAGCAACTGGGGTAACCTCACAAAAGAGCTCGCTGATACTGACCTGGTTTATGGTTCATTTTCAGGTGCCTCCAGTAGTAGGGATTCTGACCAGGCAAGATTTGACAGCTTACAACATTTTGATGGCCTTCCCCAATATTGCAAGGCCAAAGAGTGAAGGCAAATGA | 2436 | 44.29 | MDSAERNVRRSMEAGAQEEEEEEEEDSNDPESMPLNQPLLKRNRTLSSSPLAIIGSKVSYIESLDYEINENDLFKHDWRSRSRIQVLQYIFLKWTLAFLVGLLTGIIASVINLAIENIAGYKLLAVVGFIEEDRFMLNRYVMGFVYFTLANFLLTMVAAVLCVCFASTAAGPGIPEIKAYLNGVDTPNMYGATTLIVKIVGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDKYRIKWGWIRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICNSGECGLFGKGGLIMFDVSNVSLRYHVMDIIPASIIGIIGGVLGSLYNHLLHKVLRLYNLINQKGKVHKLLLTIVVSIFTSVCLYCLPFLAKCTPCDSSLTDSTCPTTGRSGNFKQFNCPSGHYNDLATLLLTTNDDAVRNIFSTNTSTEYHPLSLLIFFAVYCVLGLITFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFLESNPEPWMRNITVGELVDAKPGVITLCGIEKVARIVDVLKNTTHNGFPVVDGGVVLPGGTAVGATQLHGLILRTHLVQALKKKWFLRQKRRTEDWEVREKFTWVDLAERELKIEEVAVTSDEMEMYVDLHPLTNTTPYTVVESMSVAKALVLFRQVGLRHLIVVPNYQATGVTSQKSSLILTWFMVHFQVPPVVGILTRQDLTAYNILMAFPNIARPKSEGK | 811 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 11105088 | 11108390 | + | Bpe004820.1 | Bpe11g01498 | 111643 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe11g01498 | 811 | SUPERFAMILY | CBS-domain pair | 592 | 764 | IPR046342 | - | |
| Bpe11g01498 | 811 | Gene3D | - | 598 | 767 | IPR046342 | - | |
| Bpe11g01498 | 811 | Coils | Coil | 1 | 21 | - | - | |
| Bpe11g01498 | 811 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 27 | 807 | - | - | |
| Bpe11g01498 | 811 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Bpe11g01498 | 811 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
| Bpe11g01498 | 811 | Gene3D | Clc chloride channel | 85 | 590 | - | - | |
| Bpe11g01498 | 811 | Pfam | Voltage gated chloride channel | 155 | 569 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
| Bpe11g01498 | 811 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC-A | 27 | 807 | - | - | |
| Bpe11g01498 | 811 | PRINTS | Chloride channel signature | 520 | 536 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
| Bpe11g01498 | 811 | PRINTS | Chloride channel signature | 488 | 508 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
| Bpe11g01498 | 811 | PRINTS | Chloride channel signature | 576 | 590 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
| Bpe11g01498 | 811 | PRINTS | Chloride channel signature | 167 | 184 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
| Bpe11g01498 | 811 | PRINTS | Chloride channel signature | 198 | 217 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
| Bpe11g01498 | 811 | PRINTS | Chloride channel signature | 538 | 557 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
| Bpe11g01498 | 811 | PRINTS | Chloride channel signature | 262 | 281 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
| Bpe11g01498 | 811 | PRINTS | Plant CLC chloride channel signature | 67 | 75 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
| Bpe11g01498 | 811 | PRINTS | Plant CLC chloride channel signature | 283 | 291 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
| Bpe11g01498 | 811 | PRINTS | Plant CLC chloride channel signature | 315 | 322 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
| Bpe11g01498 | 811 | PRINTS | Plant CLC chloride channel signature | 297 | 307 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
| Bpe11g01498 | 811 | PRINTS | Plant CLC chloride channel signature | 440 | 456 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
| Bpe11g01498 | 811 | CDD | CBS_pair_voltage-gated_CLC_euk_bac | 609 | 794 | - | - | |
| Bpe11g01498 | 811 | SUPERFAMILY | Clc chloride channel | 71 | 591 | IPR014743 | - | |
| Bpe11g01498 | 811 | CDD | ClC_6_like | 62 | 589 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe04g00839 | Bpe-Chr4:5516404 | Bpe11g01498 | Bpe-Chr11:11105088 | 0 | dispersed | |
| Bpe11g01498 | Bpe-Chr11:11105088 | Bpe13g01153 | Bpe-Chr13:16981922 | 0 | dispersed | |
| Bpe11g01498 | Bpe-Chr11:11105088 | Bpe05g00733 | Bpe-Chr5:20807724 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe11g01498 | K05016 | - | zju:107427939 | 1289.25 |