Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01519 | ATGGCTTCTTCTTCAAACTATTCGAATTCTCCATGTGCTGCCTGTAAGTTCTTGAGGAGAAAATGCTTGCCAAATTGCATTTTCGCCCCGTATTTCCCTCCTGAAGAGCCACAGAAATTTGTGAATGTTCACAAAATATTTGGAGCAAGTAATGTGAGTAAGCTTCTGAATGAAGTCTTACCTCATCACAGAGAAGATGCAGTAAATTCTCTTGCGTATGAAGCAGAAGCAAGAATCAAAGATCCAGTCTATGGCTGCGTTGGAGCCATTTCAATCCTGCAAAAGCAAGTTCTTCGCCTGAAGAAAGAGTTAGACGCTACAAATGCAGATCTGATAAGGTATGCCTATAATGAATTACCCACTTCTCAGTTTGGAAGGAGATTCGGCCATGATTCCAGTCTGTTTTTCTCTCCTCCTGCAAACAATGGCGGATATGGAGATGCCCATCAGAAAGGAGAAGAAAGCTCATGA | 471 | 42.04 | MASSSNYSNSPCAACKFLRRKCLPNCIFAPYFPPEEPQKFVNVHKIFGASNVSKLLNEVLPHHREDAVNSLAYEAEARIKDPVYGCVGAISILQKQVLRLKKELDATNADLIRYAYNELPTSQFGRRFGHDSSLFFSPPANNGGYGDAHQKGEESS | 156 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11281461 | 11281931 | - | Bpe004842.1 | Bpe11g01519 | 111664 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01519 | 156 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 4 | 123 | - | - | |
Bpe11g01519 | 156 | Coils | Coil | 90 | 110 | - | - | |
Bpe11g01519 | 156 | Pfam | Lateral organ boundaries (LOB) domain | 11 | 107 | IPR004883 | - | |
Bpe11g01519 | 156 | ProSiteProfiles | LOB domain profile. | 10 | 111 | IPR004883 | - | |
Bpe11g01519 | 156 | PANTHER | PROTEIN LATERAL ORGAN BOUNDARIES | 4 | 123 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe10g00374 | Bpe-Chr10:11320668 | Bpe11g01519 | Bpe-Chr11:11281461 | 2.30E-33 | dispersed | |
Bpe11g01519 | Bpe-Chr11:11281461 | Bpe12g00665 | Bpe-Chr12:12311949 | 7.04E-73 | dispersed | |
Bpe15g00346 | Bpe-Chr15:15008398 | Bpe11g01519 | Bpe-Chr11:11281461 | 5.97E-45 | dispersed | |
Bpe11g01519 | Bpe-Chr11:11281461 | Bpe07g00855 | Bpe-Chr7:14679814 | 6.47E-72 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22123 | PF03195 | LOB | 5.70E-41 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01519 | - | - | pvy:116145256 | 243.047 |