Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01534 ATGATCGAGGTGGTGAAGAATGAGAGTCTGCCACCTCACCATCATCACAACCACCAGCACAACATGATTCTCGGAGATAGCAGTGGGGGCGAGGAGCCCGAAGTGAAAGCGCCGAAGAAACGGGCCGAGACTTGGGTTCAGGAAGAGACTCGGAGCCTGATAAACTTTCGACGGCAAGTCGATGGACTTTTCAACACTTCAAAGTCCAACAAGCACCTATGGGAACAGATCTCGGCAAAACTGAGAGATAAGGGTTTCGATCGCTCCCCAACGATGTGTACAGATAAGTGGAGGAACTTGCAAAAAGAGTTCAAGAAAGCGAGACACCAAGCTAAAGGTAGCAGCAAATCGGCAAAAATGTTGTATTACGAGGAGCTGGAGAAGCTGCTTAGAGATAGAACTAAAAATTCTGGGGCATATAAGAGCCCCACGGCCCAGAAGGTCGAATCTTACATTCAATTTGCTGATAAGGGTGAGGATTTCTTTAAAATTCCGACTAGTGACAGGTCAGCTGTCAACTTGGAAAGGCAATTGGATCCTGATGGCCACCATCTCGCAATTACTGCTGCTGATGCAGTAGGAGTCAATGAAGTGCCTCCTTGGAACTGGAGGGAGACCCCTGGAAATGCAAGAGAGGATGGACATTCTTCTTATTGCGGAAGGATTATATCAGTCAAGTTGGGAGACTATACTAGAAGAATCGGAATTGATGGGACATCAGATGCGATTAAAGATGCCATTAAGTCTGCATTCAGGTTGAGGACTAGACGGGCATTTTGGTTGGAAGATGAAGATCATGTCATTCGGAGTCTTGACAGGGACATGCCTTTGGGAAATTACACTCTTCACCTTGACGAAGTGGCTGTTTTGACGGAAGAGATTACAGTATACACCGAGGATGATTTCTCCCGACGATGCTTGTCGGGTTTAAGAGAGCTTAGCAATTACAAATGCATCGATACTTTTGTTGATCTTCATTCAGGTGGAACGTCTGAGGGGACCTACATGTTTAAGTATGACAGCGTTCATGGCCTCTGGAAGCACCATGAACTTAAGGTTCAGGACCCTAAAACACTTCTCTTTGGTGAAAAACCAGTCACTGTTTTTGGATTCAGGAATCCGGAGGAGATCCCATGGGGAGAGGCTGGAGCTGATTTTGTTGTTGAGTCGACAGGTGTTTTCACAGATAAGGACAAGGCTGCTACTCACTTGAAGGGTGGGGCTAAGAAGGTTATCATCTCTGCCCCAAGCAAGGATGCACCCATGTTTGTTGTGGGTGTCAATGAGAAAGAATACAAACCAGAGCTTGATGTTGTTTCCAATGCCAGTTGCACCACCAACTGTTTAGCCCCGTTGGCCAAGGCTCAATCAATTACGAAGATTAAAAAAAACTGTTTCTCTATGATGTTTGAGCTTTTATTTCTTTTTTATTTTCAGGTTATAAATGACAGATTTGGTATTGTTGAGGGTCTGATGACGACTGTCCACTCCATCACTGCCACGCAGAAGACGGTCGATGGTCCATCTATGAAAGACTGGAGAGGTGGCAGAGCTGCTTCCTTCAACATCATTCCCAGCAGCACTGGAGCTGCTAAGGCTGTTGGTAAAGTTCTGCCGGAACTGAACGGGAAGTTGACGGGAATGGCTTTCCGGGTCCCAACTGTGGATGTTTCAGTCGTTGATCTTACCGTCAGACTAGAAAACAAGGCTAGTTATGAGGACATCAAGGCTGCAATCAAGGAGGAATCCGAAGGCAGCTTGAAGGGAATACTCGGCTACACCGAGGATGATGTTGTGTCGACCGACTTTCTGGGTGATAGCAGATCAAGCATTTTCGACGCCAAGGCAGGCATTGCGTTGAGCGATAACTTTGTGAAGCTTGTTTCATGGTACGACAATGAATGGGGATACAGTTCTCGAGTGATAGACTTGATCCGACACATGAACTCTACCCTGTGA 1959 46.4 MIEVVKNESLPPHHHHNHQHNMILGDSSGGEEPEVKAPKKRAETWVQEETRSLINFRRQVDGLFNTSKSNKHLWEQISAKLRDKGFDRSPTMCTDKWRNLQKEFKKARHQAKGSSKSAKMLYYEELEKLLRDRTKNSGAYKSPTAQKVESYIQFADKGEDFFKIPTSDRSAVNLERQLDPDGHHLAITAADAVGVNEVPPWNWRETPGNAREDGHSSYCGRIISVKLGDYTRRIGIDGTSDAIKDAIKSAFRLRTRRAFWLEDEDHVIRSLDRDMPLGNYTLHLDEVAVLTEEITVYTEDDFSRRCLSGLRELSNYKCIDTFVDLHSGGTSEGTYMFKYDSVHGLWKHHELKVQDPKTLLFGEKPVTVFGFRNPEEIPWGEAGADFVVESTGVFTDKDKAATHLKGGAKKVIISAPSKDAPMFVVGVNEKEYKPELDVVSNASCTTNCLAPLAKAQSITKIKKNCFSMMFELLFLFYFQVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTVDVSVVDLTVRLENKASYEDIKAAIKEESEGSLKGILGYTEDDVVSTDFLGDSRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSSRVIDLIRHMNSTL 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11434580 11441736 - Bpe004859.2 Bpe11g01534 111679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01534 652 Gene3D - 634 646 - -
Bpe11g01534 652 Gene3D Dihydrodipicolinate Reductase; domain 2 478 633 - -
Bpe11g01534 652 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 331 455 IPR036291 -
Bpe11g01534 652 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 330 397 IPR020828 GO:0051287
Bpe11g01534 652 ProSiteProfiles Myb-like domain profile. 37 101 IPR001005 -
Bpe11g01534 652 Gene3D - 45 107 - -
Bpe11g01534 652 MobiDBLite consensus disorder prediction 1 43 - -
Bpe11g01534 652 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 333 455 - -
Bpe11g01534 652 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 479 649 - -
Bpe11g01534 652 Gene3D - 310 457 - -
Bpe11g01534 652 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 479 631 IPR020829 GO:0016620
Bpe11g01534 652 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 478 631 - -
Bpe11g01534 652 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 403 416 IPR020831 GO:0016620
Bpe11g01534 652 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 438 456 IPR020831 GO:0016620
Bpe11g01534 652 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 333 455 IPR020831 GO:0016620
Bpe11g01534 652 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 479 649 IPR020831 GO:0016620
Bpe11g01534 652 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 442 449 IPR020830 GO:0016620
Bpe11g01534 652 CDD GT1 43 108 - -
Bpe11g01534 652 SMART gp_dh_n_7 323 444 IPR020828 GO:0051287
Bpe11g01534 652 SMART sant 41 103 IPR001005 -
Bpe11g01534 652 Pfam Myb/SANT-like DNA-binding domain 44 129 IPR044822 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00350 Bpe-Chr4:2226258 Bpe11g01534 Bpe-Chr11:11434580 7.90E-11 dispersed
Bpe09g00535 Bpe-Chr9:14127580 Bpe11g01534 Bpe-Chr11:11434580 0 dispersed
Bpe09g00536 Bpe-Chr9:14144234 Bpe11g01534 Bpe-Chr11:11434580 0 dispersed
Bpe11g01534 Bpe-Chr11:11434580 Bpe15g00204 Bpe-Chr15:13118083 2.82E-168 dispersed
Bpe15g00395 Bpe-Chr15:15458834 Bpe11g01534 Bpe-Chr11:11434580 1.43E-07 dispersed
Bpe11g01534 Bpe-Chr11:11434580 Bpe12g00035 Bpe-Chr12:298495 3.17E-149 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22124 PF02800 Gp_dh_C 6.80E-68 CL0139 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01534 K00134 - qsu:111985470 534.643