Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01534 | ATGATCGAGGTGGTGAAGAATGAGAGTCTGCCACCTCACCATCATCACAACCACCAGCACAACATGATTCTCGGAGATAGCAGTGGGGGCGAGGAGCCCGAAGTGAAAGCGCCGAAGAAACGGGCCGAGACTTGGGTTCAGGAAGAGACTCGGAGCCTGATAAACTTTCGACGGCAAGTCGATGGACTTTTCAACACTTCAAAGTCCAACAAGCACCTATGGGAACAGATCTCGGCAAAACTGAGAGATAAGGGTTTCGATCGCTCCCCAACGATGTGTACAGATAAGTGGAGGAACTTGCAAAAAGAGTTCAAGAAAGCGAGACACCAAGCTAAAGGTAGCAGCAAATCGGCAAAAATGTTGTATTACGAGGAGCTGGAGAAGCTGCTTAGAGATAGAACTAAAAATTCTGGGGCATATAAGAGCCCCACGGCCCAGAAGGTCGAATCTTACATTCAATTTGCTGATAAGGGTGAGGATTTCTTTAAAATTCCGACTAGTGACAGGTCAGCTGTCAACTTGGAAAGGCAATTGGATCCTGATGGCCACCATCTCGCAATTACTGCTGCTGATGCAGTAGGAGTCAATGAAGTGCCTCCTTGGAACTGGAGGGAGACCCCTGGAAATGCAAGAGAGGATGGACATTCTTCTTATTGCGGAAGGATTATATCAGTCAAGTTGGGAGACTATACTAGAAGAATCGGAATTGATGGGACATCAGATGCGATTAAAGATGCCATTAAGTCTGCATTCAGGTTGAGGACTAGACGGGCATTTTGGTTGGAAGATGAAGATCATGTCATTCGGAGTCTTGACAGGGACATGCCTTTGGGAAATTACACTCTTCACCTTGACGAAGTGGCTGTTTTGACGGAAGAGATTACAGTATACACCGAGGATGATTTCTCCCGACGATGCTTGTCGGGTTTAAGAGAGCTTAGCAATTACAAATGCATCGATACTTTTGTTGATCTTCATTCAGGTGGAACGTCTGAGGGGACCTACATGTTTAAGTATGACAGCGTTCATGGCCTCTGGAAGCACCATGAACTTAAGGTTCAGGACCCTAAAACACTTCTCTTTGGTGAAAAACCAGTCACTGTTTTTGGATTCAGGAATCCGGAGGAGATCCCATGGGGAGAGGCTGGAGCTGATTTTGTTGTTGAGTCGACAGGTGTTTTCACAGATAAGGACAAGGCTGCTACTCACTTGAAGGGTGGGGCTAAGAAGGTTATCATCTCTGCCCCAAGCAAGGATGCACCCATGTTTGTTGTGGGTGTCAATGAGAAAGAATACAAACCAGAGCTTGATGTTGTTTCCAATGCCAGTTGCACCACCAACTGTTTAGCCCCGTTGGCCAAGGCTCAATCAATTACGAAGATTAAAAAAAACTGTTTCTCTATGATGTTTGAGCTTTTATTTCTTTTTTATTTTCAGGTTATAAATGACAGATTTGGTATTGTTGAGGGTCTGATGACGACTGTCCACTCCATCACTGCCACGCAGAAGACGGTCGATGGTCCATCTATGAAAGACTGGAGAGGTGGCAGAGCTGCTTCCTTCAACATCATTCCCAGCAGCACTGGAGCTGCTAAGGCTGTTGGTAAAGTTCTGCCGGAACTGAACGGGAAGTTGACGGGAATGGCTTTCCGGGTCCCAACTGTGGATGTTTCAGTCGTTGATCTTACCGTCAGACTAGAAAACAAGGCTAGTTATGAGGACATCAAGGCTGCAATCAAGGAGGAATCCGAAGGCAGCTTGAAGGGAATACTCGGCTACACCGAGGATGATGTTGTGTCGACCGACTTTCTGGGTGATAGCAGATCAAGCATTTTCGACGCCAAGGCAGGCATTGCGTTGAGCGATAACTTTGTGAAGCTTGTTTCATGGTACGACAATGAATGGGGATACAGTTCTCGAGTGATAGACTTGATCCGACACATGAACTCTACCCTGTGA | 1959 | 46.4 | MIEVVKNESLPPHHHHNHQHNMILGDSSGGEEPEVKAPKKRAETWVQEETRSLINFRRQVDGLFNTSKSNKHLWEQISAKLRDKGFDRSPTMCTDKWRNLQKEFKKARHQAKGSSKSAKMLYYEELEKLLRDRTKNSGAYKSPTAQKVESYIQFADKGEDFFKIPTSDRSAVNLERQLDPDGHHLAITAADAVGVNEVPPWNWRETPGNAREDGHSSYCGRIISVKLGDYTRRIGIDGTSDAIKDAIKSAFRLRTRRAFWLEDEDHVIRSLDRDMPLGNYTLHLDEVAVLTEEITVYTEDDFSRRCLSGLRELSNYKCIDTFVDLHSGGTSEGTYMFKYDSVHGLWKHHELKVQDPKTLLFGEKPVTVFGFRNPEEIPWGEAGADFVVESTGVFTDKDKAATHLKGGAKKVIISAPSKDAPMFVVGVNEKEYKPELDVVSNASCTTNCLAPLAKAQSITKIKKNCFSMMFELLFLFYFQVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTVDVSVVDLTVRLENKASYEDIKAAIKEESEGSLKGILGYTEDDVVSTDFLGDSRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSSRVIDLIRHMNSTL | 652 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11434580 | 11441736 | - | Bpe004859.2 | Bpe11g01534 | 111679 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01534 | 652 | Gene3D | - | 634 | 646 | - | - | |
Bpe11g01534 | 652 | Gene3D | Dihydrodipicolinate Reductase; domain 2 | 478 | 633 | - | - | |
Bpe11g01534 | 652 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 331 | 455 | IPR036291 | - | |
Bpe11g01534 | 652 | Pfam | Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain | 330 | 397 | IPR020828 | GO:0051287 | |
Bpe11g01534 | 652 | ProSiteProfiles | Myb-like domain profile. | 37 | 101 | IPR001005 | - | |
Bpe11g01534 | 652 | Gene3D | - | 45 | 107 | - | - | |
Bpe11g01534 | 652 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Bpe11g01534 | 652 | PANTHER | GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE | 333 | 455 | - | - | |
Bpe11g01534 | 652 | PANTHER | GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE | 479 | 649 | - | - | |
Bpe11g01534 | 652 | Gene3D | - | 310 | 457 | - | - | |
Bpe11g01534 | 652 | Pfam | Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain | 479 | 631 | IPR020829 | GO:0016620 | |
Bpe11g01534 | 652 | SUPERFAMILY | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 478 | 631 | - | - | |
Bpe11g01534 | 652 | PRINTS | Glyceraldehyde-3-phosphate dehydrogenase signature | 403 | 416 | IPR020831 | GO:0016620 | |
Bpe11g01534 | 652 | PRINTS | Glyceraldehyde-3-phosphate dehydrogenase signature | 438 | 456 | IPR020831 | GO:0016620 | |
Bpe11g01534 | 652 | PANTHER | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE | 333 | 455 | IPR020831 | GO:0016620 | |
Bpe11g01534 | 652 | PANTHER | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE | 479 | 649 | IPR020831 | GO:0016620 | |
Bpe11g01534 | 652 | ProSitePatterns | Glyceraldehyde 3-phosphate dehydrogenase active site. | 442 | 449 | IPR020830 | GO:0016620 | |
Bpe11g01534 | 652 | CDD | GT1 | 43 | 108 | - | - | |
Bpe11g01534 | 652 | SMART | gp_dh_n_7 | 323 | 444 | IPR020828 | GO:0051287 | |
Bpe11g01534 | 652 | SMART | sant | 41 | 103 | IPR001005 | - | |
Bpe11g01534 | 652 | Pfam | Myb/SANT-like DNA-binding domain | 44 | 129 | IPR044822 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00350 | Bpe-Chr4:2226258 | Bpe11g01534 | Bpe-Chr11:11434580 | 7.90E-11 | dispersed | |
Bpe09g00535 | Bpe-Chr9:14127580 | Bpe11g01534 | Bpe-Chr11:11434580 | 0 | dispersed | |
Bpe09g00536 | Bpe-Chr9:14144234 | Bpe11g01534 | Bpe-Chr11:11434580 | 0 | dispersed | |
Bpe11g01534 | Bpe-Chr11:11434580 | Bpe15g00204 | Bpe-Chr15:13118083 | 2.82E-168 | dispersed | |
Bpe15g00395 | Bpe-Chr15:15458834 | Bpe11g01534 | Bpe-Chr11:11434580 | 1.43E-07 | dispersed | |
Bpe11g01534 | Bpe-Chr11:11434580 | Bpe12g00035 | Bpe-Chr12:298495 | 3.17E-149 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22124 | PF02800 | Gp_dh_C | 6.80E-68 | CL0139 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01534 | K00134 | - | qsu:111985470 | 534.643 |