Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01542 ATGGAGGAAAACCCAAATCGAGCTTCGCCTGAAAATGGGACACAGAAGATATCAGACCATGCCGGAAGAAGGAAGAGCGTATCGGCTATTGACGAAGGAGATTCAGTCGATTGCTCCGGAAAGCACTGCAGATCATGGACCGGAGGTGCAGTAGCCGACTGCGTGGCTATCTGTTGTTGCCCCTGTGCAGTGATCAGCGTTTTGGGCCTCGCTTTCGTCAAACTCCCATTAATGGTGGGCAGAAAATGCTTGCGCTTGAAGAAGAGGACGGGTCAGAAAAAATGCGACGTTGACAAAAATGAAAATCTGAGAAAAGTTAAGGTAGAGATGCAGGGGAAGGAGAGGAAAGATGCGTTGGGCAACCCAAGCTTAGTCCACGCTCAGAGCATTTTAGCCATCTGGGCTTGTCAAGTCATCCTCATGGGTGCCATCAAGGGCTACCGTATCGCCGGTGAACCGCTAGGAGAAATCACCGACCCAATTTACCCCGGCAGGTCGTTTGATCCATTGGGTATGGCCGATGACCCGGAAGCATTTGCAGAGCTAAAAGTTAAAGAGATAAAGAATGGAAGACTAGGCATGTTCTCGATGTTCGGATTCTTGGTCCAGGCCATTGTCACCGGAAAGGGACCTCTTGAGAATTTGGCCGATCCGCTTGCTAACCCTGTAAACAACAATGCATGGGCTTATGCCACAAACTTTGTTTCCAGAAAGTGA 717 49.51 MEENPNRASPENGTQKISDHAGRRKSVSAIDEGDSVDCSGKHCRSWTGGAVADCVAICCCPCAVISVLGLAFVKLPLMVGRKCLRLKKRTGQKKCDVDKNENLRKVKVEMQGKERKDALGNPSLVHAQSILAIWACQVILMGAIKGYRIAGEPLGEITDPIYPGRSFDPLGMADDPEAFAELKVKEIKNGRLGMFSMFGFLVQAIVTGKGPLENLADPLANPVNNNAWAYATNFVSRK 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11480781 11485327 - Bpe004867.1 Bpe11g01542 111687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01542 238 MobiDBLite consensus disorder prediction 1 28 - -
Bpe11g01542 238 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 116 237 - -
Bpe11g01542 238 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 116 237 IPR001344 GO:0009765|GO:0016020
Bpe11g01542 238 Pfam Chlorophyll A-B binding protein 114 204 IPR022796 -
Bpe11g01542 238 Gene3D Chlorophyll a/b binding protein domain 92 231 - -
Bpe11g01542 238 SUPERFAMILY Chlorophyll a-b binding protein 114 234 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00691 Bpe-Chr2:4685937 Bpe11g01542 Bpe-Chr11:11480781 9.66E-07 dispersed
Bpe03g01182 Bpe-Chr3:30768132 Bpe11g01542 Bpe-Chr11:11480781 9.05E-06 dispersed
Bpe11g01542 Bpe-Chr11:11480781 Bpe14g00731 Bpe-Chr14:5674397 1.84E-68 dispersed
Bpe11g01542 Bpe-Chr11:11480781 Bpe09g00499 Bpe-Chr9:13644192 4.38E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01542 K08912 - csv:101213845 224.172