Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01552 ATGGAGTCGCGTCAGTTCTTGTTCGATCCGCCGGCTTGCCATGGCAAGATGCTGTACCTCGGAAACGGTGATTCTGGATTTCAAGTGAGAATGATGATGAGCATGGAAGATACTTCAAGAAGACGACCTTTTTTTAGTTCGCAGGACGACATGTTCGACGAGGAGTTCTACGACGAACAGATACCGGACAAGAAGCGTCGCCTCACGCAGGAGCAGGTGGTTCATTTGGAGAAGAGCTTTGAGGCAGAAAACAAACTGGAGCCAGACCGAAAGACTCAATTGGCAGACAAGCTTGGGCTGCAGCCGAGGCAAGTTGCTGTGTGGTTTCAGAACCGCCGTGCCCGTTGGAAGACAAAGCAGCTTGAAAGGGAGTTTGATGTTCTGAAATCTACATATGATTCGCTTCTTTCTAATTACGACTCTGTTTTCAAAGAGAACGAAAAGCTCAAATCCGAGTTTTCTAATGTTTCAATGATAACTCACCTGCAGGTTGTTTCCTTATCTGAAAAACTAGAAGCAAAAGAGGCAGTTGGAATTTCAAACCTGCCCAAGAAATCCGTCACTTCGACATTAGATATCACACCCATCTCTTCCAATTTTGGCGTCAAGTTGGAAGATGGGTGGAGCACCGGAACAGGTGGAAGCACGGTGGTGGATGAGGATGGTCCTCAACTTCTGGACAGTGGCAATTCTTATTTTCTGAGCAACGACTACACTGTCACTGACAGTATGCATTCTGAGGAGGACGACCGGAGTGACGATGGCCGGAGTTGCTTCCGCGATGTCTTTGCGCAAAACCATGTGGAGGTAGAGTCTCTTGGCTGGTGGGACTGGTCTTGA 840 47.98 MESRQFLFDPPACHGKMLYLGNGDSGFQVRMMMSMEDTSRRRPFFSSQDDMFDEEFYDEQIPDKKRRLTQEQVVHLEKSFEAENKLEPDRKTQLADKLGLQPRQVAVWFQNRRARWKTKQLEREFDVLKSTYDSLLSNYDSVFKENEKLKSEFSNVSMITHLQVVSLSEKLEAKEAVGISNLPKKSVTSTLDITPISSNFGVKLEDGWSTGTGGSTVVDEDGPQLLDSGNSYFLSNDYTVTDSMHSEEDDRSDDGRSCFRDVFAQNHVEVESLGWWDWS 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11549792 11551598 + Bpe004877.1 Bpe11g01552 111697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01552 279 PRINTS Lambda-repressor HTH signature 90 99 IPR000047 GO:0003677
Bpe11g01552 279 PRINTS Lambda-repressor HTH signature 99 115 IPR000047 GO:0003677
Bpe11g01552 279 SMART HOX_1 62 123 IPR001356 GO:0003677
Bpe11g01552 279 Gene3D - 53 126 - -
Bpe11g01552 279 CDD homeodomain 64 120 IPR001356 GO:0003677
Bpe11g01552 279 SUPERFAMILY Homeodomain-like 51 121 IPR009057 -
Bpe11g01552 279 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 265 IPR045224 GO:0003700
Bpe11g01552 279 Coils Coil 132 152 - -
Bpe11g01552 279 ProSiteProfiles 'Homeobox' domain profile. 59 119 IPR001356 GO:0003677
Bpe11g01552 279 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5 1 265 - -
Bpe11g01552 279 Pfam Homeodomain 64 117 IPR001356 GO:0003677
Bpe11g01552 279 Pfam Homeobox associated leucine zipper 119 153 IPR003106 GO:0006355|GO:0043565
Bpe11g01552 279 ProSitePatterns 'Homeobox' domain signature. 94 117 IPR017970 GO:0000981|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe09g00488 Bpe11g01552 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01552 Bpe-Chr11:11549792 Bpe15g00614 Bpe-Chr15:17020322 2.58E-41 dispersed
Bpe13g01506 Bpe-Chr13:20488785 Bpe11g01552 Bpe-Chr11:11549792 1.43E-28 transposed
Bpe11g01552 Bpe-Chr11:11549792 Bpe09g00488 Bpe-Chr9:13362619 5.51E-109 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22126 PF00046 Homeodomain 1.70E-17 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01552 K09338 - jre:108992866 338.576