Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01572 ATGGGACTAGTGCCTAACGATGTCAGTGCTTGGAGCGCTGGAAAATCAAAGGGAAGGATGAAAGATGATGAAGGCGAGAGGATAGGTTGTTGGATTAAAATGAGACTTTTTAGAAGCTGCATTTCATCGAGATCGAAAGTGGACAGCTCGATAAGTGGCACAACCACTCAATGTGAAAGTAAGTCCACGATTGATATGAGCGAAGACCAACCAGTTGCACCAGTTCCATCATCTTCAACTACCAGCAATACTGAGAGTGCTCTCTCTACCATCAATATAGAAGAAGAACTTAAAATTGCTTCTCAGCTTCGAAAATTTGCTTTTCATGAGCTGAAGTCATCCACAAGAAATTTTAGACCAGAAAGCCTTCTTGGTGAAGGAGGGTTTGGCTGTGTATTCAAGGGGTGGATCAATGAGAACGGATCAACTCCTGTAAAACCTGGCACAGGCCTTGCAGTTGCCGTGAAAACCCTGAATCACGATGGACTTCAGGGTCATAAAGAATGGCTTGCTGAAGTTAATTATCTTGGTGACCTTCTACATCCAAACTTAGTTAAATTAATTGGATATTGTATTGAGGATGATCAACGGCTTCTAGTTTATGAATTTATGCCTCGAGGAAGTTTGGAGAATCATCTGTTTAGAAGATCACTTCCTCTTCCTTGGTTCATAAGAATGAAAATTGCACTCGGTGCTGCTAAGGGTCTTGCCTTTCTGCATGAGGAAGCTGAGAGGCCTGTAATTTATCGAGATTTTAAGACATCCAATATCTTGTTAGATGCGGATTATAATGCCAAGCTTTCTGATTTTGGACTTGCAAAAGATGGTCCAGAGGGTGATAAAACTCATGTATCTACTCGAGTGATGGGAACTTATGGCTATGCTGCCCCCGAATATGTTATGACAGGACATCTTACATCAAAAAGTGATGTCTATAGTTTTGGGGTTGTGCTGCTCGAGATGCTAACTGGGCGGAGATCCATGGACAAAAACCGACCTAACGGAGAGCACAATTTGGTGGAATGGGCCCGCCCACAACTTGGAGAAAGACGAAGGTTTTATCGACTTATCGATCCACGTCTCGAAGGGCGATTCTCAATCAAAGGGGCCCAAAAAGCTATTCAATTGGCTTCCCACTGCCTAAACCGAGACCCAAAAGCCAGACCCTTGATGAGTGAAGTCGTTCAAGTGCTCAAGCCTCTTCCCAATCTCAAGGACATGGCCTCTTCTTCCTCCTTCTTCCAAGCCATGCAAATTGACCGTGTGGGGACTAACACAAGTAGTAGAAATGGCATTAGAATTCAACCAGGGTTGTCCAAGAAGGGTCAGCCTATCAGAAGCCTCTCCTTCAGTCCGAATGACTCGCCATATTATCAGGTACTTCCTCACCCATCTCCTAAGCCAGATTTTCGACCGTAA 1419 44.05 MGLVPNDVSAWSAGKSKGRMKDDEGERIGCWIKMRLFRSCISSRSKVDSSISGTTTQCESKSTIDMSEDQPVAPVPSSSTTSNTESALSTINIEEELKIASQLRKFAFHELKSSTRNFRPESLLGEGGFGCVFKGWINENGSTPVKPGTGLAVAVKTLNHDGLQGHKEWLAEVNYLGDLLHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWFIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPRLEGRFSIKGAQKAIQLASHCLNRDPKARPLMSEVVQVLKPLPNLKDMASSSSFFQAMQIDRVGTNTSSRNGIRIQPGLSKKGQPIRSLSFSPNDSPYYQVLPHPSPKPDFRP 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11788865 11792225 - Bpe004896.1 Bpe11g01572 111717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01572 472 MobiDBLite consensus disorder prediction 47 87 - -
Bpe11g01572 472 Gene3D Phosphorylase Kinase; domain 1 98 203 - -
Bpe11g01572 472 MobiDBLite consensus disorder prediction 1 22 - -
Bpe11g01572 472 MobiDBLite consensus disorder prediction 425 472 - -
Bpe11g01572 472 PANTHER OS01G0588500 PROTEIN-RELATED 52 453 - -
Bpe11g01572 472 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 52 453 - -
Bpe11g01572 472 CDD STKc_IRAK 124 401 - -
Bpe11g01572 472 Gene3D Transferase(Phosphotransferase) domain 1 204 420 - -
Bpe11g01572 472 SUPERFAMILY Protein kinase-like (PK-like) 104 419 IPR011009 -
Bpe11g01572 472 ProSiteProfiles Protein kinase domain profile. 118 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01572 472 Pfam Protein kinase domain 121 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01572 472 MobiDBLite consensus disorder prediction 442 458 - -
Bpe11g01572 472 ProSitePatterns Protein kinases ATP-binding region signature. 124 156 IPR017441 GO:0005524
Bpe11g01572 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00970 Bpe-Chr3:29240697 Bpe11g01572 Bpe-Chr11:11788865 3.40E-152 dispersed
Bpe11g01572 Bpe-Chr11:11788865 Bpe13g01432 Bpe-Chr13:19594519 0 dispersed
Bpe15g01336 Bpe-Chr15:21494537 Bpe11g01572 Bpe-Chr11:11788865 1.35E-107 dispersed
Bpe04g01225 Bpe-Chr4:17738448 Bpe11g01572 Bpe-Chr11:11788865 6.76E-100 transposed
Bpe11g01572 Bpe-Chr11:11788865 Bpe09g00470 Bpe-Chr9:13007468 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63602 PF00069 Pkinase 1.40E-46 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01572 - - vvi:100853083 745.347