Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01580 | AAAATCGAAATGGAAGGCAAGGGGAGTGTGTTGATGAATCGCTACGAACTAGGAAGGTTATTAGGCCAGGGAACATTCGCCAAGGTCTACCATGCGAGGAATATAGCGACCGGAACGAGTGCGGCCATTAAAGTTATCAACAAGGAGAAGATCTTGAAGGTCGGGCTGATCGATCAGATCAAGAGAGAAATTTCTGTCATGAGACTGGTTAGGCATGCTAATGTCGTCGAGCTTTACGAAGTAATGGCGAGCAAGACGAAAATCTACTTCGTCATGGAGTACGTGAAGGGCGGTGAGCTGTTCAACAAGGTAGCCAAAGGGAAGCTGCGGGAGGACGTTGCCCGGAAATATTTTCAGCAGCTGATCAGCGCCGTCGATTACTGCCACAGTAGAGGAGTGAGTCATCGGGATTTAAAACCCGAAAATTTGCTGTTGGATGAATATGGTAACTTAAAAGTTTCCGATTTCGGGTTGAGCGCCCTTGCAGATTCTAAGAGACAAGATGGATTGCTTCATACGACCTGCGGGACTCCGGCTTATGTTGCTCCAGAAGTGATTAAACGGAATGGTTATGATGGATCCAAAGCCGATATTTGGTCGTGTGGAGTGATTTTGTTTGTTTTGTTGGCTGGTTATCTCCCATTCCATGATTCTAATCTAATCGAATTGTATCGAAAGATTGAGAAGGGTCAAGTCAAGTACCCAAAATGGTTGTCGCCAGAGGCTCGCCGGTTGCTGTCGAAGATATTGGATCCTAACCCAAATATGAGGATATCGGTGGTTGGAATTATGGAAAATTCTTGGTTTAGGATGGGATTAGGAGAACCCAAACCAGAAGTTAACGTAATAGAGGACAAAGAAGAGGCCGTTCGTGAATGTGATGAGGGTATTATCGACTCGTCTCCGGAGTTGAAACCAGTGGGAAAGCCTTGTAATTTGAATGCTTTTGATATAATCTCGCTCTCTGCAGGTTTTGATTTGTCTGGTTTATTCGACGAGACTGACCGGAAAAAAGAAACTAGATTCACATCAAACAAGCCGTCAAACGCCATTGTCTCGAAGTTGGAAGACATAGCCAAGGGTTTGAAGCTATTGGTGAAGAAGGATGGGGGCCTGTTACAAATCCGAGGGTCCAAAGAAGGCCGGAAAGGCGTCTTAGGCATCGATGCCGAGATTTTCGAGATCACCCCATTACTTCACATTGTTGAAGTGAAGAAGTCAAGTGGAGACACGCTGGAGTATGAGAAGATGATGAATCAGGATATAAGGCCAGGTCTCAAGGACATTGTTTGGACATGGCAAGGGGAGTAG | 1311 | 45.54 | KIEMEGKGSVLMNRYELGRLLGQGTFAKVYHARNIATGTSAAIKVINKEKILKVGLIDQIKREISVMRLVRHANVVELYEVMASKTKIYFVMEYVKGGELFNKVAKGKLREDVARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDEYGNLKVSDFGLSALADSKRQDGLLHTTCGTPAYVAPEVIKRNGYDGSKADIWSCGVILFVLLAGYLPFHDSNLIELYRKIEKGQVKYPKWLSPEARRLLSKILDPNPNMRISVVGIMENSWFRMGLGEPKPEVNVIEDKEEAVRECDEGIIDSSPELKPVGKPCNLNAFDIISLSAGFDLSGLFDETDRKKETRFTSNKPSNAIVSKLEDIAKGLKLLVKKDGGLLQIRGSKEGRKGVLGIDAEIFEITPLLHIVEVKKSSGDTLEYEKMMNQDIRPGLKDIVWTWQGE | 436 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11867642 | 11868952 | + | Bpe004903.1 | Bpe11g01580 | 111725 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01580 | 436 | SUPERFAMILY | Protein kinase-like (PK-like) | 11 | 270 | IPR011009 | - | |
Bpe11g01580 | 436 | CDD | CIPK_C | 314 | 427 | - | - | |
Bpe11g01580 | 436 | Pfam | Protein kinase domain | 15 | 269 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g01580 | 436 | PANTHER | - | 5 | 436 | - | - | |
Bpe11g01580 | 436 | SMART | serkin_6 | 15 | 269 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g01580 | 436 | Gene3D | Kinase associated domain 1, KA1 | 309 | 432 | - | - | |
Bpe11g01580 | 436 | ProSitePatterns | Protein kinases ATP-binding region signature. | 21 | 44 | IPR017441 | GO:0005524 | |
Bpe11g01580 | 436 | Gene3D | Transferase(Phosphotransferase) domain 1 | 7 | 308 | - | - | |
Bpe11g01580 | 436 | ProSiteProfiles | Protein kinase domain profile. | 15 | 269 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g01580 | 436 | Pfam | NAF domain | 310 | 368 | IPR004041 | GO:0007165 | |
Bpe11g01580 | 436 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 133 | 145 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe11g01580 | 436 | ProSiteProfiles | NAF domain profile. | 308 | 332 | IPR018451 | GO:0007165 | |
Bpe11g01580 | 436 | CDD | STKc_SnRK3 | 14 | 268 | - | - | |
Bpe11g01580 | 436 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 | 5 | 436 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00643 | Bpe-Chr1:4332488 | Bpe11g01580 | Bpe-Chr11:11867642 | 6.64E-169 | dispersed | |
Bpe04g00078 | Bpe-Chr4:610135 | Bpe11g01580 | Bpe-Chr11:11867642 | 2.30E-174 | dispersed | |
Bpe08g00661 | Bpe-Chr8:6880093 | Bpe11g01580 | Bpe-Chr11:11867642 | 6.31E-159 | dispersed | |
Bpe11g01580 | Bpe-Chr11:11867642 | Bpe14g00922 | Bpe-Chr14:6876097 | 1.32E-155 | dispersed | |
Bpe01g00067 | Bpe-Chr1:432007 | Bpe11g01580 | Bpe-Chr11:11867642 | 1.03E-147 | transposed | |
Bpe02g01084 | Bpe-Chr2:14011075 | Bpe11g01580 | Bpe-Chr11:11867642 | 9.20E-175 | transposed | |
Bpe04g00807 | Bpe-Chr4:5312150 | Bpe11g01580 | Bpe-Chr11:11867642 | 5.72E-131 | transposed | |
Bpe11g01580 | Bpe-Chr11:11867642 | Bpe02g00928 | Bpe-Chr2:8070253 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63603 | PF00069 | Pkinase | 6.90E-75 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01580 | K07198 | - | cit:102619997 | 674.085 |