Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01580 AAAATCGAAATGGAAGGCAAGGGGAGTGTGTTGATGAATCGCTACGAACTAGGAAGGTTATTAGGCCAGGGAACATTCGCCAAGGTCTACCATGCGAGGAATATAGCGACCGGAACGAGTGCGGCCATTAAAGTTATCAACAAGGAGAAGATCTTGAAGGTCGGGCTGATCGATCAGATCAAGAGAGAAATTTCTGTCATGAGACTGGTTAGGCATGCTAATGTCGTCGAGCTTTACGAAGTAATGGCGAGCAAGACGAAAATCTACTTCGTCATGGAGTACGTGAAGGGCGGTGAGCTGTTCAACAAGGTAGCCAAAGGGAAGCTGCGGGAGGACGTTGCCCGGAAATATTTTCAGCAGCTGATCAGCGCCGTCGATTACTGCCACAGTAGAGGAGTGAGTCATCGGGATTTAAAACCCGAAAATTTGCTGTTGGATGAATATGGTAACTTAAAAGTTTCCGATTTCGGGTTGAGCGCCCTTGCAGATTCTAAGAGACAAGATGGATTGCTTCATACGACCTGCGGGACTCCGGCTTATGTTGCTCCAGAAGTGATTAAACGGAATGGTTATGATGGATCCAAAGCCGATATTTGGTCGTGTGGAGTGATTTTGTTTGTTTTGTTGGCTGGTTATCTCCCATTCCATGATTCTAATCTAATCGAATTGTATCGAAAGATTGAGAAGGGTCAAGTCAAGTACCCAAAATGGTTGTCGCCAGAGGCTCGCCGGTTGCTGTCGAAGATATTGGATCCTAACCCAAATATGAGGATATCGGTGGTTGGAATTATGGAAAATTCTTGGTTTAGGATGGGATTAGGAGAACCCAAACCAGAAGTTAACGTAATAGAGGACAAAGAAGAGGCCGTTCGTGAATGTGATGAGGGTATTATCGACTCGTCTCCGGAGTTGAAACCAGTGGGAAAGCCTTGTAATTTGAATGCTTTTGATATAATCTCGCTCTCTGCAGGTTTTGATTTGTCTGGTTTATTCGACGAGACTGACCGGAAAAAAGAAACTAGATTCACATCAAACAAGCCGTCAAACGCCATTGTCTCGAAGTTGGAAGACATAGCCAAGGGTTTGAAGCTATTGGTGAAGAAGGATGGGGGCCTGTTACAAATCCGAGGGTCCAAAGAAGGCCGGAAAGGCGTCTTAGGCATCGATGCCGAGATTTTCGAGATCACCCCATTACTTCACATTGTTGAAGTGAAGAAGTCAAGTGGAGACACGCTGGAGTATGAGAAGATGATGAATCAGGATATAAGGCCAGGTCTCAAGGACATTGTTTGGACATGGCAAGGGGAGTAG 1311 45.54 KIEMEGKGSVLMNRYELGRLLGQGTFAKVYHARNIATGTSAAIKVINKEKILKVGLIDQIKREISVMRLVRHANVVELYEVMASKTKIYFVMEYVKGGELFNKVAKGKLREDVARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDEYGNLKVSDFGLSALADSKRQDGLLHTTCGTPAYVAPEVIKRNGYDGSKADIWSCGVILFVLLAGYLPFHDSNLIELYRKIEKGQVKYPKWLSPEARRLLSKILDPNPNMRISVVGIMENSWFRMGLGEPKPEVNVIEDKEEAVRECDEGIIDSSPELKPVGKPCNLNAFDIISLSAGFDLSGLFDETDRKKETRFTSNKPSNAIVSKLEDIAKGLKLLVKKDGGLLQIRGSKEGRKGVLGIDAEIFEITPLLHIVEVKKSSGDTLEYEKMMNQDIRPGLKDIVWTWQGE 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11867642 11868952 + Bpe004903.1 Bpe11g01580 111725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01580 436 SUPERFAMILY Protein kinase-like (PK-like) 11 270 IPR011009 -
Bpe11g01580 436 CDD CIPK_C 314 427 - -
Bpe11g01580 436 Pfam Protein kinase domain 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01580 436 PANTHER - 5 436 - -
Bpe11g01580 436 SMART serkin_6 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01580 436 Gene3D Kinase associated domain 1, KA1 309 432 - -
Bpe11g01580 436 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Bpe11g01580 436 Gene3D Transferase(Phosphotransferase) domain 1 7 308 - -
Bpe11g01580 436 ProSiteProfiles Protein kinase domain profile. 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01580 436 Pfam NAF domain 310 368 IPR004041 GO:0007165
Bpe11g01580 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Bpe11g01580 436 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Bpe11g01580 436 CDD STKc_SnRK3 14 268 - -
Bpe11g01580 436 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 5 436 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00643 Bpe-Chr1:4332488 Bpe11g01580 Bpe-Chr11:11867642 6.64E-169 dispersed
Bpe04g00078 Bpe-Chr4:610135 Bpe11g01580 Bpe-Chr11:11867642 2.30E-174 dispersed
Bpe08g00661 Bpe-Chr8:6880093 Bpe11g01580 Bpe-Chr11:11867642 6.31E-159 dispersed
Bpe11g01580 Bpe-Chr11:11867642 Bpe14g00922 Bpe-Chr14:6876097 1.32E-155 dispersed
Bpe01g00067 Bpe-Chr1:432007 Bpe11g01580 Bpe-Chr11:11867642 1.03E-147 transposed
Bpe02g01084 Bpe-Chr2:14011075 Bpe11g01580 Bpe-Chr11:11867642 9.20E-175 transposed
Bpe04g00807 Bpe-Chr4:5312150 Bpe11g01580 Bpe-Chr11:11867642 5.72E-131 transposed
Bpe11g01580 Bpe-Chr11:11867642 Bpe02g00928 Bpe-Chr2:8070253 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63603 PF00069 Pkinase 6.90E-75 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01580 K07198 - cit:102619997 674.085