Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01609 | ATGGCCGGTGGAGTGGCCGACGACGGAGAGAGTACTCCCGGACTACTGTTGATTGACCTTCTTCAAGACGTTATCGGTACCTCGGCTGGGACAGTCTCCAGCGACATGTTCAAGAAGGACTGTACCGATCTGGTGCGTCGGATCGCTCTCTTAAGCCACTTGTTTGAAGAGATTAGGGATTTGAAGATGGCCGGTGAATCTGGAGCTCCCGATGCGTCGACTTCGTTGGCTTCCTCGTCGAAAACCGGTAGTGGGAATAAGCTCTCCTGGCTATCGGATCTGGTTTTAGCTCTGAAGGCTGCCAAGCGACTTCTTTTCGTTGCGCGTACTTTCATTTCCGGCAATGGCTCTTCTGATGGAGCTGCCAAGAAAATAGCATTCCAATTTGAGTGTGTTACATGGAAGTTAGAGAAAGCATTGGGAAACATACCATTTGATCGATTTGACATCTCAGAGGAAGTTCAAGAGCAGGTTGAGTTGGTAAGAGCACAATTGAGAAGAGCTGCCAAAAAGTATGGATCACCACCCTCAGTTACACAATCTGTTCTCTCTCAGGACAGAGAAATAAGCATCTTATTATCAGAGCATTTGTCAAACGATGTGTCTTTTGAGAATTCGGATAGTATAGATGATGACATTACTGTGAAGATGGATACTTTTTGCGACAGCAGTACTTTGATCAGCCATAGTAATGAACAGAGAACTCAATTGTTGGAAAGAACGAGGAATGTTTCTACTTCAGAGGTATCTTCAAATGATGCTAATGCTGAAGGTCCTGACAACTCAGTAAATGAGAGTGCAGATGAGAACAAGAAGTCTGATGCAAATATTATACCTGACGATTTTTTATGCCCCATATCTCTAGAATTAATGAGAGACCCTGTTATTGTGTCCACAGGACAGCTTGATTTTGACATCTATTTTTTCTTCTGTCTGCAGACGTATGAAAGATCCTACATTCAAAGATGGATAGATTGTGGCAACTCAACATGTCCAAAAACCCAGCAGAAGCTTCAAAATTTAACTCTTACCCCGAATTACGTTCTGAGAAGTCTCATCTCTCAATGGTGCCTGAAGCACAATATTGAACAACCAACAGGTTTAACCAATGGAAAAATCAAAAAGTTTGATGGAACATATCGTGATGTTTGTGCTGAAATAGCAGCCATTGAAGCTCTGGTTCGCAAACTCTCAGGCCATTCCCTTGAGGAGCAGAGAGCAGCAGTAACTGAACTCCGATCTCTATCCAAAAGAAGTACAGATAACAGAATACTAATAGCAGAAGCTGGAGCCATTCCAGCTCTAGTCAACCTTTTAACGTCAGACGATGTCTTAATACAAGAGAATGCAGTCACTTCTATCCTTAACCTTTCGATATATGAAAACAACAAAGGACTCATCATGCTAGCTGGGGCTGTTCCTTCTATTGTCCAGGTTCTTAGGATGGGAAGCATGGAAGCTAGAGAGAATGCAGCGGCTACTCTCTTCAGCCTCTCTCTTGCGGATGAAAACCGGATAATAATTGGCGCATCTGGGGCAATCCCAGCATTGGTAGAATTGCTTCAAAACGGGAGCACGAGAGGTAAGAAAGATGCAGCCACAGCTCTATTCAATTTATGCATTTACCAGGGCAACAAAGGTCGAGCTGTAAGGGCCGGAATTGTCTCAGCCCTGTTGAAGATGCTTACAGACTCAAATTCATGCATGGTCGATGAGGCTCTTACAATAATGTCTGTTCTTGCCAATCATCAAGAAGCAAAAGTTGCCATTGTAAAAGCCAGCACCATACCAGTTTTGATTGATCTGGTGAGGACGAGTTTGCCTCGTAATAAAGAAAATTCTGCTGCCATTTTACTTGCGTTGTGTAAGAGAGATTCCGAAAATCTTGCATGTATCAGTAGGCTTGGAGCCATAATACCACTAACCGAACTTGCAAGAAGTGGCTCGGAAAGAGCAAAAAGGAAAGCTAATTCATTGCTGGAGCATCTTCGAAAAATACAGCAGCATTAG | 2010 | 43.38 | MAGGVADDGESTPGLLLIDLLQDVIGTSAGTVSSDMFKKDCTDLVRRIALLSHLFEEIRDLKMAGESGAPDASTSLASSSKTGSGNKLSWLSDLVLALKAAKRLLFVARTFISGNGSSDGAAKKIAFQFECVTWKLEKALGNIPFDRFDISEEVQEQVELVRAQLRRAAKKYGSPPSVTQSVLSQDREISILLSEHLSNDVSFENSDSIDDDITVKMDTFCDSSTLISHSNEQRTQLLERTRNVSTSEVSSNDANAEGPDNSVNESADENKKSDANIIPDDFLCPISLELMRDPVIVSTGQLDFDIYFFFCLQTYERSYIQRWIDCGNSTCPKTQQKLQNLTLTPNYVLRSLISQWCLKHNIEQPTGLTNGKIKKFDGTYRDVCAEIAAIEALVRKLSGHSLEEQRAAVTELRSLSKRSTDNRILIAEAGAIPALVNLLTSDDVLIQENAVTSILNLSIYENNKGLIMLAGAVPSIVQVLRMGSMEARENAAATLFSLSLADENRIIIGASGAIPALVELLQNGSTRGKKDAATALFNLCIYQGNKGRAVRAGIVSALLKMLTDSNSCMVDEALTIMSVLANHQEAKVAIVKASTIPVLIDLVRTSLPRNKENSAAILLALCKRDSENLACISRLGAIIPLTELARSGSERAKRKANSLLEHLRKIQQH | 669 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12206034 | 12209408 | - | Bpe004926.1 | Bpe11g01609 | 111754 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01609 | 669 | CDD | RING-Ubox_PUB | 282 | 336 | IPR045210 | - | |
Bpe11g01609 | 669 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 471 | 513 | IPR000225 | GO:0005515 | |
Bpe11g01609 | 669 | MobiDBLite | consensus disorder prediction | 231 | 263 | - | - | |
Bpe11g01609 | 669 | SUPERFAMILY | ARM repeat | 384 | 663 | IPR016024 | - | |
Bpe11g01609 | 669 | SMART | arm_5 | 625 | 665 | IPR000225 | GO:0005515 | |
Bpe11g01609 | 669 | SMART | arm_5 | 583 | 623 | IPR000225 | GO:0005515 | |
Bpe11g01609 | 669 | SMART | arm_5 | 501 | 541 | IPR000225 | GO:0005515 | |
Bpe11g01609 | 669 | SMART | arm_5 | 542 | 582 | IPR000225 | GO:0005515 | |
Bpe11g01609 | 669 | SMART | arm_5 | 419 | 459 | IPR000225 | GO:0005515 | |
Bpe11g01609 | 669 | SMART | arm_5 | 460 | 500 | IPR000225 | GO:0005515 | |
Bpe11g01609 | 669 | MobiDBLite | consensus disorder prediction | 231 | 273 | - | - | |
Bpe11g01609 | 669 | SUPERFAMILY | RING/U-box | 276 | 364 | - | - | |
Bpe11g01609 | 669 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 275 | 360 | IPR013083 | - | |
Bpe11g01609 | 669 | ProSiteProfiles | U-box domain profile. | 277 | 363 | IPR003613 | GO:0004842|GO:0016567 | |
Bpe11g01609 | 669 | Gene3D | - | 568 | 669 | IPR011989 | - | |
Bpe11g01609 | 669 | Gene3D | - | 361 | 464 | IPR011989 | - | |
Bpe11g01609 | 669 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 388 | 430 | IPR000225 | GO:0005515 | |
Bpe11g01609 | 669 | SMART | Ubox_2 | 281 | 356 | IPR003613 | GO:0004842|GO:0016567 | |
Bpe11g01609 | 669 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 430 | 472 | IPR000225 | GO:0005515 | |
Bpe11g01609 | 669 | Coils | Coil | 151 | 171 | - | - | |
Bpe11g01609 | 669 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 11 | 22 | 666 | - | - | |
Bpe11g01609 | 669 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 512 | 554 | IPR000225 | GO:0005515 | |
Bpe11g01609 | 669 | Pfam | U-box domain | 278 | 361 | IPR003613 | GO:0004842|GO:0016567 | |
Bpe11g01609 | 669 | Pfam | Armadillo/beta-catenin-like repeat | 502 | 540 | IPR000225 | GO:0005515 | |
Bpe11g01609 | 669 | Pfam | Armadillo/beta-catenin-like repeat | 420 | 458 | IPR000225 | GO:0005515 | |
Bpe11g01609 | 669 | MobiDBLite | consensus disorder prediction | 71 | 85 | - | - | |
Bpe11g01609 | 669 | PANTHER | U BOX DOMAIN-CONTAINING | 22 | 666 | - | - | |
Bpe11g01609 | 669 | MobiDBLite | consensus disorder prediction | 66 | 85 | - | - | |
Bpe11g01609 | 669 | Gene3D | - | 465 | 567 | IPR011989 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe10g00993 | Bpe11g01609 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe08g01367 | Bpe-Chr8:14743875 | Bpe11g01609 | Bpe-Chr11:12206034 | 1.29E-158 | dispersed | |
Bpe10g00993 | Bpe-Chr10:15332923 | Bpe11g01609 | Bpe-Chr11:12206034 | 0 | dispersed | |
Bpe13g00261 | Bpe-Chr13:10558950 | Bpe11g01609 | Bpe-Chr11:12206034 | 2.77E-35 | dispersed | |
Bpe11g01609 | Bpe-Chr11:12206034 | Bpe11g00764 | Bpe-Chr11:5755923 | 5.46E-163 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01609 | - | - | csv:101221534 | 880.552 |