Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01618 | ATGATTTCGGCGACCTTCAATTTACCTGCGATTCAGCTGCTTGACATGTCTCAGAACTACTTGTCCGGGTCCCTTCCTCCTGATTTTTGCCATAACTCTTCCAGAATTAGGGTTTTAGATCTTGGTTTCAACTCTCTCTCTGGCAGTCTTTCTCCGGGACTGGGCAATTGCGCCTCCTTAGAAACACTCTCTCTGGAGAATAATAACCTAACAGGCGACATTCCCGACGACCTGTTCCGGATGCAAAAACTGATGATTTTGAGACTTCGAGACAACCTGCTTTCAGGAAAGCTGAGCAAGCTTATTGGTAATCTTTCAAACCTTGTTCGTCTGGATATTGCTTCCAATAGATTTTCTGGAGAAATTCCAGATGTGTTTCACACTGCCAAAAAATTGGAGTTCTTAGTTGCTGAATCCAACAATTTCACTGGTCAGATACCAAAATCGTTATCTAACTCTCCTACGTTAAATCTTCTGAATTTGAGGAACAATTCTCTGACGGGTCCCATTAATATCAACTGCTCTGCCATGGCGAACCTGACCTCTCTTGATTTGGGTACCAACTGGTTTTACGGCCCATTGCCGAGCAATCTTCCGTCTTGTCGATTGCTCAAGAACATAAATCTTGCACGAAATAACTTCGGTGGAGAAGTCCCTGTAACCTTCAAGAACTTTCAGCGCCTTTCTTATCTTTCACTGTCGAATTCGAGCATCATCAATCTCCACTCTGCACTTCAAATCTTGCAGCAGTGCAAGAGCTTGAGTACTTTGGTCCTGACCTTGAACTTCCATAATGAAGAGCTGCCTTCGGATCCTTCTCTCAATTTCGAAAATCTGAAGGTTTTCATCATAGCCAGTTGCAAACTGAAGGGTTTAATGCCCCAATGGTTGAGGAAGAGTTCAAAACTGCAGTTATTGGATTTGTCGTGGAACAGACTCGGCGGAACGATCCCACAATGGTTCGGAGATTTTCAGCTTCTGTTTTACTTGGATTTATCGAACAACTCATTTACAGGAGAGATTCCAGTGACCATAACTGGATTACAGAGCCTTATAAATAAAACCATTTCCTTCGAGGAACCTTCCCCAGATTTCCCATTTTTTATGAAGAGAAATGTCAGTGGACCATTGAAGTACACTCAAGTGTTGAGTTTTCCTCCCACCCTGGAGCTTAGCAACAATAATCTTAGTGGACCAATCTGGCGTGAATTTGGGAATCTGAGGAAGCTCCATGTTTTGATTCTGAAATTCAATAATCTTTCAGGAGAAATTCCGAGCTGTTTATCAGAGATGGCTAGCCTCGAGACATTGGATTTGTCCCATAATAAGCTTACTGGAACAATACCACAATCATTAGTGAGTCTCAGTTTCTTGTCTAAGTTCAGTGTTGCTTACAATCAGTTGAGTGGGGTGGTTCCTACGGGTGGTCAGTTTCCAACCTTCCCTAATTCAAGCTTTGTTGGAAATAATCTTTGTGGCGATCATGCTTCTCCTTGTTCTTCAAATGATCAAAGCTCGTTTGAATCTCCTGAAAAATCAGGACGAAGCCGAGGAAGTATAATTGGTGAGGCTGTTGGGATTTCGTTTGGAACAGCTTTCGTTCTTAGTCTTTTGATTCTGATTGTGCTTCGGACATGTAACCGCAGAGGCATTGATCTTGAAAGAGACATGTCTAACACTGATGATAAAAATTTAGAGGAGCTCGAATCAAGACTAGTCGTTATGTTCCAAAACAAAGATGACAATAAAGGGATCACGATTGACGATCTTTTGAAATCGACCAACAACTTTGACCAGGCAAACATAATTGGGTGTGGAGGTTTTGGCCTCGTTTACAAAGCCACGCTTCTAGATGGTAAGAGAGTCGCGATCAAACGGCTCTCAGGTGATTGTGGGCAAATAGAAAGAGAGTTTCGGGCAGAAGTCGAAACACTCTCGAGAGCTCAGCATCCTAATCTTGTTCTCCTGCAGGGCTATTGCATTCATAGATACGACAGGCTCTTGATATATTCGTTCATGGAAAACGGCAGTTTGGATTATTGGCTGCACGAAAAATTCGATGGACCTTCTTCTTTAGATTGGAACACAAGGCTCAAGATTGCTCAAGGAGCTGCAAGAGGACTTGCTTACTTGCACCTATCATGTGAGCCACACATCCTTCACCGAGACATCAAATCAAGTAACATCCTTTTAGATGAGAATTTTGGTGCCCATTTGGCTGATTTTGGTCTTGCTAGGCTCATACGTCCTTACGACACACACGTGACGACCGATCTCGTCGGGACATTAGGGTACATTCCGCCTGAGTATGGGCAAGCGTCAGTCGCTACTTACAAGGGCGATGTGTATAGTTTCGGAGTCGTTCTTTTGGAACTTTTGACGGGCAAAAGGCCGATGGATATATGCAAGCCTAAAGGGTGTCGAGATTTGATATCTTGGGTGTTACAGATGAAGAAGGAAGGCAAGGAAAGCAAAGTGTACGACCCTTTAATCAACGAAGAGCAGCATGACAAGCAATTGTCGGAGGTTCTTGAAATATCGTGCCTCTGTCTGAGTGAATATCCAAAAAATCGGCCTTCAACTCACCAGCTAGTTTCTTGGCTTGACAACCTCATCTAG | 2619 | 43.3 | MISATFNLPAIQLLDMSQNYLSGSLPPDFCHNSSRIRVLDLGFNSLSGSLSPGLGNCASLETLSLENNNLTGDIPDDLFRMQKLMILRLRDNLLSGKLSKLIGNLSNLVRLDIASNRFSGEIPDVFHTAKKLEFLVAESNNFTGQIPKSLSNSPTLNLLNLRNNSLTGPININCSAMANLTSLDLGTNWFYGPLPSNLPSCRLLKNINLARNNFGGEVPVTFKNFQRLSYLSLSNSSIINLHSALQILQQCKSLSTLVLTLNFHNEELPSDPSLNFENLKVFIIASCKLKGLMPQWLRKSSKLQLLDLSWNRLGGTIPQWFGDFQLLFYLDLSNNSFTGEIPVTITGLQSLINKTISFEEPSPDFPFFMKRNVSGPLKYTQVLSFPPTLELSNNNLSGPIWREFGNLRKLHVLILKFNNLSGEIPSCLSEMASLETLDLSHNKLTGTIPQSLVSLSFLSKFSVAYNQLSGVVPTGGQFPTFPNSSFVGNNLCGDHASPCSSNDQSSFESPEKSGRSRGSIIGEAVGISFGTAFVLSLLILIVLRTCNRRGIDLERDMSNTDDKNLEELESRLVVMFQNKDDNKGITIDDLLKSTNNFDQANIIGCGGFGLVYKATLLDGKRVAIKRLSGDCGQIEREFRAEVETLSRAQHPNLVLLQGYCIHRYDRLLIYSFMENGSLDYWLHEKFDGPSSLDWNTRLKIAQGAARGLAYLHLSCEPHILHRDIKSSNILLDENFGAHLADFGLARLIRPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGKRPMDICKPKGCRDLISWVLQMKKEGKESKVYDPLINEEQHDKQLSEVLEISCLCLSEYPKNRPSTHQLVSWLDNLI | 872 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12318423 | 12321041 | - | Bpe004934.1 | Bpe11g01618 | 111763 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01618 | 872 | CDD | STKc_IRAK | 603 | 871 | - | - | |
Bpe11g01618 | 872 | SMART | serkin_6 | 597 | 868 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g01618 | 872 | PANTHER | OSJNBB0004A17.8 PROTEIN | 32 | 871 | - | - | |
Bpe11g01618 | 872 | SUPERFAMILY | RNI-like | 35 | 470 | - | - | |
Bpe11g01618 | 872 | Gene3D | Ribonuclease Inhibitor | 177 | 508 | IPR032675 | - | |
Bpe11g01618 | 872 | Pfam | Leucine rich repeat | 408 | 468 | IPR001611 | GO:0005515 | |
Bpe11g01618 | 872 | Pfam | Leucine Rich Repeat | 302 | 322 | IPR001611 | GO:0005515 | |
Bpe11g01618 | 872 | Gene3D | Phosphorylase Kinase; domain 1 | 556 | 672 | - | - | |
Bpe11g01618 | 872 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 719 | 731 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe11g01618 | 872 | SMART | LRR_typ_2 | 105 | 128 | IPR003591 | - | |
Bpe11g01618 | 872 | SMART | LRR_typ_2 | 8 | 32 | IPR003591 | - | |
Bpe11g01618 | 872 | SMART | LRR_typ_2 | 177 | 201 | IPR003591 | - | |
Bpe11g01618 | 872 | SMART | LRR_typ_2 | 431 | 455 | IPR003591 | - | |
Bpe11g01618 | 872 | SMART | LRR_typ_2 | 57 | 81 | IPR003591 | - | |
Bpe11g01618 | 872 | SUPERFAMILY | Protein kinase-like (PK-like) | 582 | 868 | IPR011009 | - | |
Bpe11g01618 | 872 | Gene3D | Transferase(Phosphotransferase) domain 1 | 673 | 872 | - | - | |
Bpe11g01618 | 872 | Gene3D | Ribonuclease Inhibitor | 1 | 80 | IPR032675 | - | |
Bpe11g01618 | 872 | ProSiteProfiles | Leucine-rich repeat profile. | 59 | 81 | IPR001611 | GO:0005515 | |
Bpe11g01618 | 872 | Gene3D | Ribonuclease Inhibitor | 81 | 176 | IPR032675 | - | |
Bpe11g01618 | 872 | PRINTS | Leucine-rich repeat signature | 303 | 316 | - | - | |
Bpe11g01618 | 872 | PRINTS | Leucine-rich repeat signature | 431 | 444 | - | - | |
Bpe11g01618 | 872 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 32 | 871 | - | - | |
Bpe11g01618 | 872 | ProSiteProfiles | Leucine-rich repeat profile. | 433 | 456 | IPR001611 | GO:0005515 | |
Bpe11g01618 | 872 | ProSitePatterns | Protein kinases ATP-binding region signature. | 603 | 625 | IPR017441 | GO:0005524 | |
Bpe11g01618 | 872 | Pfam | Protein kinase domain | 599 | 866 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g01618 | 872 | ProSiteProfiles | Protein kinase domain profile. | 597 | 872 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe09g00240 | Bpe-Chr9:1740675 | Bpe11g01618 | Bpe-Chr11:12318423 | 1.09E-06 | dispersed | |
Bpe11g01618 | Bpe-Chr11:12318423 | Bpe03g00294 | Bpe-Chr3:3991704 | 1.41E-15 | dispersed | |
Bpe02g00205 | Bpe-Chr2:1435335 | Bpe11g01618 | Bpe-Chr11:12318423 | 1.92E-73 | transposed | |
Bpe08g00973 | Bpe-Chr8:12154906 | Bpe11g01618 | Bpe-Chr11:12318423 | 5.44E-75 | transposed | |
Bpe10g00581 | Bpe-Chr10:12775008 | Bpe11g01618 | Bpe-Chr11:12318423 | 4.26E-15 | transposed | |
Bpe10g00974 | Bpe-Chr10:15211628 | Bpe11g01618 | Bpe-Chr11:12318423 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63604 | PF00069 | Pkinase | 3.60E-42 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01618 | - | - | cit:102619276 | 1187.94 |