Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01633 | ATGGCGTTTTTCCCAGCAAACTTTTTCTTACGTACTTCTCAAGAAGATGCACACCAACCTCCCACCATTAATGGAGTTCTTCCTTCATGCGCACCTCAAGATTTTCATGTTGCAGTACCGTTTGTAGGGAAGAGATGTAGGCCATTTTCCGGAGTGGATTTGGTCGGGGAAGAAGACAACAATGGGGACGACGATCTGTCCGACGATGGATCGCAAATGGGGGAGAAGAAGAAGAGGCTGAATATGGAGCAAGTGAAGACACTCGAGAAGAATTTCGAGTTGGGAAACAAGCTAGAGCCTGAGAGAAAACTGCAGTTGGCTAGGGTTCTTGGTCTGCAACCCAGACAAATTGCAATCTGGTTTCAGAACAGAAGAGCAAGGTGGAAGACAAAGCAGCTGGAGAAAGACTATGATCTTCTTAAACGGCAGTTTGAAGCCATTAAAGCAGATAATCAGACGCTCCAAGCCAGGAACAAAAAGCTTCAAGATGAGATGATGGCTTTGAAAGGTAGAAAGCCAACAGAATCTATCAATCTCAACAAAGAAACAGAAGGATCTTGTAGTAATAGAAGTGAGAACAGCTCTGATATTAGGCTGGATATCTCCATGACACCACCCATTGACAGCCCTTCTTTCCGGCCTTTATTTCCCTCGTCTTCTTCGAAGCACCCTCCGGCCATGGCCCACCTATTCGGAGCCTCCTCGAGACCGGACGATCACCTCCAATGGCAGAAAATTGATCAGATGGTTAAAGAAGAAAGCTTAGGCAATATGTTTTGTGGAATTGAAGATCAGTCTGGGTTTTGGCCATTGTTGGAGCAGCAACAATTTAATGGATGA | 840 | 45.36 | MAFFPANFFLRTSQEDAHQPPTINGVLPSCAPQDFHVAVPFVGKRCRPFSGVDLVGEEDNNGDDDLSDDGSQMGEKKKRLNMEQVKTLEKNFELGNKLEPERKLQLARVLGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNQTLQARNKKLQDEMMALKGRKPTESINLNKETEGSCSNRSENSSDIRLDISMTPPIDSPSFRPLFPSSSSKHPPAMAHLFGASSRPDDHLQWQKIDQMVKEESLGNMFCGIEDQSGFWPLLEQQQFNG | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12447351 | 12452875 | - | Bpe004946.1 | Bpe11g01633 | 111778 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01633 | 279 | CDD | homeodomain | 76 | 132 | IPR001356 | GO:0003677 | |
Bpe11g01633 | 279 | Coils | Coil | 123 | 171 | - | - | |
Bpe11g01633 | 279 | MobiDBLite | consensus disorder prediction | 170 | 195 | - | - | |
Bpe11g01633 | 279 | MobiDBLite | consensus disorder prediction | 54 | 77 | - | - | |
Bpe11g01633 | 279 | MobiDBLite | consensus disorder prediction | 179 | 195 | - | - | |
Bpe11g01633 | 279 | ProSitePatterns | 'Homeobox' domain signature. | 106 | 129 | IPR017970 | GO:0000981|GO:0006355 | |
Bpe11g01633 | 279 | SMART | HOX_1 | 74 | 135 | IPR001356 | GO:0003677 | |
Bpe11g01633 | 279 | SUPERFAMILY | Homeodomain-like | 65 | 133 | IPR009057 | - | |
Bpe11g01633 | 279 | PRINTS | Lambda-repressor HTH signature | 102 | 111 | IPR000047 | GO:0003677 | |
Bpe11g01633 | 279 | PRINTS | Lambda-repressor HTH signature | 111 | 127 | IPR000047 | GO:0003677 | |
Bpe11g01633 | 279 | Pfam | Homeodomain | 76 | 129 | IPR001356 | GO:0003677 | |
Bpe11g01633 | 279 | Gene3D | - | 68 | 137 | - | - | |
Bpe11g01633 | 279 | ProSiteProfiles | 'Homeobox' domain profile. | 71 | 131 | IPR001356 | GO:0003677 | |
Bpe11g01633 | 279 | Pfam | Homeobox associated leucine zipper | 131 | 172 | IPR003106 | GO:0006355|GO:0043565 | |
Bpe11g01633 | 279 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 | 1 | 278 | - | - | |
Bpe11g01633 | 279 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 1 | 278 | IPR045224 | GO:0003700 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe11g01633 | Bpe13g01422 | CCT | |
Bpe11g01633 | Bpe13g01422 | ECH | |
Bpe02g02353 | Bpe11g01633 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g01633 | Bpe-Chr11:12447351 | Bpe06g00086 | Bpe-Chr6:1208829 | 2.13E-38 | dispersed | |
Bpe11g01633 | Bpe-Chr11:12447351 | Bpe13g01422 | Bpe-Chr13:19482171 | 8.46E-129 | wgd | |
Bpe11g01633 | Bpe-Chr11:12447351 | Bpe15g00614 | Bpe-Chr15:17020322 | 2.99E-33 | wgd | |
Bpe11g01633 | Bpe-Chr11:12447351 | Bpe02g02353 | Bpe-Chr2:24009360 | 1.83E-130 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22134 | PF00046 | Homeodomain | 9.30E-15 | CL0123 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01633 | K09338 | - | rcu:8286990 | 405.216 |