Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01633 ATGGCGTTTTTCCCAGCAAACTTTTTCTTACGTACTTCTCAAGAAGATGCACACCAACCTCCCACCATTAATGGAGTTCTTCCTTCATGCGCACCTCAAGATTTTCATGTTGCAGTACCGTTTGTAGGGAAGAGATGTAGGCCATTTTCCGGAGTGGATTTGGTCGGGGAAGAAGACAACAATGGGGACGACGATCTGTCCGACGATGGATCGCAAATGGGGGAGAAGAAGAAGAGGCTGAATATGGAGCAAGTGAAGACACTCGAGAAGAATTTCGAGTTGGGAAACAAGCTAGAGCCTGAGAGAAAACTGCAGTTGGCTAGGGTTCTTGGTCTGCAACCCAGACAAATTGCAATCTGGTTTCAGAACAGAAGAGCAAGGTGGAAGACAAAGCAGCTGGAGAAAGACTATGATCTTCTTAAACGGCAGTTTGAAGCCATTAAAGCAGATAATCAGACGCTCCAAGCCAGGAACAAAAAGCTTCAAGATGAGATGATGGCTTTGAAAGGTAGAAAGCCAACAGAATCTATCAATCTCAACAAAGAAACAGAAGGATCTTGTAGTAATAGAAGTGAGAACAGCTCTGATATTAGGCTGGATATCTCCATGACACCACCCATTGACAGCCCTTCTTTCCGGCCTTTATTTCCCTCGTCTTCTTCGAAGCACCCTCCGGCCATGGCCCACCTATTCGGAGCCTCCTCGAGACCGGACGATCACCTCCAATGGCAGAAAATTGATCAGATGGTTAAAGAAGAAAGCTTAGGCAATATGTTTTGTGGAATTGAAGATCAGTCTGGGTTTTGGCCATTGTTGGAGCAGCAACAATTTAATGGATGA 840 45.36 MAFFPANFFLRTSQEDAHQPPTINGVLPSCAPQDFHVAVPFVGKRCRPFSGVDLVGEEDNNGDDDLSDDGSQMGEKKKRLNMEQVKTLEKNFELGNKLEPERKLQLARVLGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNQTLQARNKKLQDEMMALKGRKPTESINLNKETEGSCSNRSENSSDIRLDISMTPPIDSPSFRPLFPSSSSKHPPAMAHLFGASSRPDDHLQWQKIDQMVKEESLGNMFCGIEDQSGFWPLLEQQQFNG 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12447351 12452875 - Bpe004946.1 Bpe11g01633 111778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01633 279 CDD homeodomain 76 132 IPR001356 GO:0003677
Bpe11g01633 279 Coils Coil 123 171 - -
Bpe11g01633 279 MobiDBLite consensus disorder prediction 170 195 - -
Bpe11g01633 279 MobiDBLite consensus disorder prediction 54 77 - -
Bpe11g01633 279 MobiDBLite consensus disorder prediction 179 195 - -
Bpe11g01633 279 ProSitePatterns 'Homeobox' domain signature. 106 129 IPR017970 GO:0000981|GO:0006355
Bpe11g01633 279 SMART HOX_1 74 135 IPR001356 GO:0003677
Bpe11g01633 279 SUPERFAMILY Homeodomain-like 65 133 IPR009057 -
Bpe11g01633 279 PRINTS Lambda-repressor HTH signature 102 111 IPR000047 GO:0003677
Bpe11g01633 279 PRINTS Lambda-repressor HTH signature 111 127 IPR000047 GO:0003677
Bpe11g01633 279 Pfam Homeodomain 76 129 IPR001356 GO:0003677
Bpe11g01633 279 Gene3D - 68 137 - -
Bpe11g01633 279 ProSiteProfiles 'Homeobox' domain profile. 71 131 IPR001356 GO:0003677
Bpe11g01633 279 Pfam Homeobox associated leucine zipper 131 172 IPR003106 GO:0006355|GO:0043565
Bpe11g01633 279 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 1 278 - -
Bpe11g01633 279 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 278 IPR045224 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe11g01633 Bpe13g01422 CCT
Bpe11g01633 Bpe13g01422 ECH
Bpe02g02353 Bpe11g01633 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01633 Bpe-Chr11:12447351 Bpe06g00086 Bpe-Chr6:1208829 2.13E-38 dispersed
Bpe11g01633 Bpe-Chr11:12447351 Bpe13g01422 Bpe-Chr13:19482171 8.46E-129 wgd
Bpe11g01633 Bpe-Chr11:12447351 Bpe15g00614 Bpe-Chr15:17020322 2.99E-33 wgd
Bpe11g01633 Bpe-Chr11:12447351 Bpe02g02353 Bpe-Chr2:24009360 1.83E-130 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22134 PF00046 Homeodomain 9.30E-15 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01633 K09338 - rcu:8286990 405.216