Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01644 | ATGAACTTCCTCGCCTCTGCTGATGCGAAACCCAGACTGAAATGGACTGCAGAACTTCATCAAAACTTTATCAAGGCTATCAATCAGCTCGGAGGGCCAGATAAGGCAACACCGAAGAGTTTGATGACAGTGATGGGCATTCCTGGACTTACTCTGTACCATCTGAAGAGTCATTTGCAGAAGTATAGGCTGGGTAAAAATCAGCAATCTGAAACCAGCATATGCAGTGGAGAAGAAGGTAATTTAGTGGATCAGACTCGTATTTTAAATATATATACTTTCATCTCCATGGTTTTTAGGCTATTGTTTGCCATTTGCAGGACTGAGAAGATTACTCAGGCTCTTCAAATGCAAATGGAAGTGCAGAGAAGACTGCATGAGCAGATTAAGGAAGAAAAACATTTGCAGATGAGGATTGAAGCACAGGGGAAGTATTTACAGTCGATACTGAAAAGAGCACAAGAATCCCTTACTGGGTATTGTTCATCGTCTCGAAGTGTGGAGCTGGCAAAGGCTGAGCTCTCTCAGCTAGCATCAATGGTGAATACAGGCTGCAACATCTGTTCATTCACAAAACCAGCAGCGACTGCAGGATTGAACTCCAATAATGATGAAAATAATCAAATGAGAACAATTTCAATGGCAAGCTCTTTCGAATTATCGGAAATCTCTGGAATCGAAGAAGAGAAGCAACAGGGCTATCCTCGAAAGTTGGCAGAAAGTAGTGCTGAGTTTTCATTACAAGACATTCATCGAGCCGAGATTGAATGGGATGAGTTGAAAAATCATGCCATTGGAATGAAGAGAAGTGGAAGCACCATTTCTGATGGAAGCTGCAGTGATATGAAGATGAAGAAGTTCAGATTATCAGAGATGATTGACTTGAACAGCTAG | 894 | 41.72 | MNFLASADAKPRLKWTAELHQNFIKAINQLGGPDKATPKSLMTVMGIPGLTLYHLKSHLQKYRLGKNQQSETSICSGEEGNLVDQTRILNIYTFISMVFRLLFAICRTEKITQALQMQMEVQRRLHEQIKEEKHLQMRIEAQGKYLQSILKRAQESLTGYCSSSRSVELAKAELSQLASMVNTGCNICSFTKPAATAGLNSNNDENNQMRTISMASSFELSEISGIEEEKQQGYPRKLAESSAEFSLQDIHRAEIEWDELKNHAIGMKRSGSTISDGSCSDMKMKKFRLSEMIDLNS | 297 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12578540 | 12579816 | - | Bpe004957.3 | Bpe11g01644 | 111789 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01644 | 297 | Pfam | Myb-like DNA-binding domain | 12 | 63 | IPR001005 | - | |
Bpe11g01644 | 297 | Pfam | MYB-CC type transfactor, LHEQLE motif | 110 | 155 | IPR025756 | - | |
Bpe11g01644 | 297 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL8 | 1 | 297 | - | - | |
Bpe11g01644 | 297 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 1 | 297 | IPR044848 | GO:0003700 | |
Bpe11g01644 | 297 | SUPERFAMILY | Homeodomain-like | 9 | 65 | IPR009057 | - | |
Bpe11g01644 | 297 | Gene3D | - | 9 | 68 | - | - | |
Bpe11g01644 | 297 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 10 | 65 | IPR006447 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g01644 | Bpe-Chr11:12578540 | Bpe15g00926 | Bpe-Chr15:19025279 | 1.17E-48 | dispersed | |
Bpe11g01644 | Bpe-Chr11:12578540 | Bpe14g00844 | Bpe-Chr14:6325672 | 3.87E-53 | transposed | |
Bpe11g01644 | Bpe-Chr11:12578540 | Bpe13g00855 | Bpe-Chr13:14754415 | 9.43E-53 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22136 | PF00249 | Myb_DNA-binding | 1.80E-06 | CL0123 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01644 | - | - | zju:107429021 | 275.789 |