Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01644 ATGAACTTCCTCGCCTCTGCTGATGCGAAACCCAGACTGAAATGGACTGCAGAACTTCATCAAAACTTTATCAAGGCTATCAATCAGCTCGGAGGGCCAGATAAGGCAACACCGAAGAGTTTGATGACAGTGATGGGCATTCCTGGACTTACTCTGTACCATCTGAAGAGTCATTTGCAGAAGTATAGGCTGGGTAAAAATCAGCAATCTGAAACCAGCATATGCAGTGGAGAAGAAGGTAATTTAGTGGATCAGACTCGTATTTTAAATATATATACTTTCATCTCCATGGTTTTTAGGCTATTGTTTGCCATTTGCAGGACTGAGAAGATTACTCAGGCTCTTCAAATGCAAATGGAAGTGCAGAGAAGACTGCATGAGCAGATTAAGGAAGAAAAACATTTGCAGATGAGGATTGAAGCACAGGGGAAGTATTTACAGTCGATACTGAAAAGAGCACAAGAATCCCTTACTGGGTATTGTTCATCGTCTCGAAGTGTGGAGCTGGCAAAGGCTGAGCTCTCTCAGCTAGCATCAATGGTGAATACAGGCTGCAACATCTGTTCATTCACAAAACCAGCAGCGACTGCAGGATTGAACTCCAATAATGATGAAAATAATCAAATGAGAACAATTTCAATGGCAAGCTCTTTCGAATTATCGGAAATCTCTGGAATCGAAGAAGAGAAGCAACAGGGCTATCCTCGAAAGTTGGCAGAAAGTAGTGCTGAGTTTTCATTACAAGACATTCATCGAGCCGAGATTGAATGGGATGAGTTGAAAAATCATGCCATTGGAATGAAGAGAAGTGGAAGCACCATTTCTGATGGAAGCTGCAGTGATATGAAGATGAAGAAGTTCAGATTATCAGAGATGATTGACTTGAACAGCTAG 894 41.72 MNFLASADAKPRLKWTAELHQNFIKAINQLGGPDKATPKSLMTVMGIPGLTLYHLKSHLQKYRLGKNQQSETSICSGEEGNLVDQTRILNIYTFISMVFRLLFAICRTEKITQALQMQMEVQRRLHEQIKEEKHLQMRIEAQGKYLQSILKRAQESLTGYCSSSRSVELAKAELSQLASMVNTGCNICSFTKPAATAGLNSNNDENNQMRTISMASSFELSEISGIEEEKQQGYPRKLAESSAEFSLQDIHRAEIEWDELKNHAIGMKRSGSTISDGSCSDMKMKKFRLSEMIDLNS 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12578540 12579816 - Bpe004957.3 Bpe11g01644 111789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01644 297 Pfam Myb-like DNA-binding domain 12 63 IPR001005 -
Bpe11g01644 297 Pfam MYB-CC type transfactor, LHEQLE motif 110 155 IPR025756 -
Bpe11g01644 297 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL8 1 297 - -
Bpe11g01644 297 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 297 IPR044848 GO:0003700
Bpe11g01644 297 SUPERFAMILY Homeodomain-like 9 65 IPR009057 -
Bpe11g01644 297 Gene3D - 9 68 - -
Bpe11g01644 297 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 10 65 IPR006447 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01644 Bpe-Chr11:12578540 Bpe15g00926 Bpe-Chr15:19025279 1.17E-48 dispersed
Bpe11g01644 Bpe-Chr11:12578540 Bpe14g00844 Bpe-Chr14:6325672 3.87E-53 transposed
Bpe11g01644 Bpe-Chr11:12578540 Bpe13g00855 Bpe-Chr13:14754415 9.43E-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22136 PF00249 Myb_DNA-binding 1.80E-06 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01644 - - zju:107429021 275.789