Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01647 ATGGATCTCACTGTGTTTTTGGTGGTGGGTTTTCTTTCACTCATCTCCTCCGTCAAAGGGTACAGCGGAGGAGGGTGGAACAGTGGCCGTGCGACCTTTTACGGCGGTGGAGATGCTTCTGGTACAATGGGAGGGGCTTGTGGGTATGGAAACCTATACAGCCAAGGGTACGGGACCGACACTGCAGCGCTGAGCACGGCTCTGTTCAACGAAGGTCTGAGCTGCGGTTCGTGCTACGAGATCCGATGCGTAAACGCCGGGAGTTCGTGCCTGCCGGGATCGATAGTGGTCACGGCCACCAACTTCTGCCCACCGAACAGCCAGGGCGGATGGTGCGACCCTCCTCAGCCGCACTTCGATCTCTCTCAGCCTGTTTTTCAGCACATAGCTCAATACAGAGCTGGAGTTGTGCCTGTGGCCTATAGAAGGGTGGCATGCAGGAAGAAGGGAGGAATAAGGTTCACAATCAATGGACATTCCTACTTCAACCTAGTTCTGGTCACCAACGTAGGCGGCGCGGGCGACGTCCATGCAGTTTCCATCAAAGGCTCGAGAACCGGGTGGCAAACGATGTCCAGAAACTGGGGCCAGAACTGGCAGAGCAACTCCTATCTCAACGGCCAAAGCCTGTCCTTCAAGGTTACCACCAGCGACGGCCAAACCCTCATCTCAAACAACGTCGCTCCGGCTGGCTGGTCCTTCGGCCAGACATTCAGTGGTGCGCAATTCTAG 732 56.15 MDLTVFLVVGFLSLISSVKGYSGGGWNSGRATFYGGGDASGTMGGACGYGNLYSQGYGTDTAALSTALFNEGLSCGSCYEIRCVNAGSSCLPGSIVVTATNFCPPNSQGGWCDPPQPHFDLSQPVFQHIAQYRAGVVPVAYRRVACRKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVSIKGSRTGWQTMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTLISNNVAPAGWSFGQTFSGAQF 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12629830 12630752 - Bpe004960.1 Bpe11g01647 111792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01647 243 Pfam Lytic transglycolase 61 141 IPR009009 -
Bpe11g01647 243 SMART dpbb_1 61 141 IPR007112 -
Bpe11g01647 243 PANTHER EXPANSIN-A15 6 243 IPR002963 GO:0009664
Bpe11g01647 243 SUPERFAMILY Barwin-like endoglucanases 9 169 IPR036908 -
Bpe11g01647 243 PANTHER EXPANSIN 6 243 - -
Bpe11g01647 243 Pfam Expansin C-terminal domain 152 229 IPR007117 -
Bpe11g01647 243 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Bpe11g01647 243 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Bpe11g01647 243 PRINTS Expansin/Lol pI family signature 226 240 IPR007118 GO:0005576
Bpe11g01647 243 PRINTS Expansin/Lol pI family signature 188 202 IPR007118 GO:0005576
Bpe11g01647 243 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576
Bpe11g01647 243 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576
Bpe11g01647 243 Gene3D - 13 147 IPR036908 -
Bpe11g01647 243 PRINTS Expansin signature 83 94 IPR002963 GO:0009664
Bpe11g01647 243 PRINTS Expansin signature 109 126 IPR002963 GO:0009664
Bpe11g01647 243 PRINTS Expansin signature 126 139 IPR002963 GO:0009664
Bpe11g01647 243 PRINTS Expansin signature 226 242 IPR002963 GO:0009664
Bpe11g01647 243 PRINTS Expansin signature 197 218 IPR002963 GO:0009664
Bpe11g01647 243 PRINTS Expansin signature 150 162 IPR002963 GO:0009664
Bpe11g01647 243 PRINTS Expansin signature 56 70 IPR002963 GO:0009664
Bpe11g01647 243 PRINTS Expansin signature 95 105 IPR002963 GO:0009664
Bpe11g01647 243 PRINTS Expansin signature 162 183 IPR002963 GO:0009664
Bpe11g01647 243 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 151 IPR007112 -
Bpe11g01647 243 SUPERFAMILY PHL pollen allergen 148 239 IPR036749 -
Bpe11g01647 243 Gene3D - 150 243 IPR036749 -
Bpe11g01647 243 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 161 240 IPR007117 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe10g00880 Bpe11g01647 CCT
Bpe11g01647 Bpe13g01406 CCT
Bpe11g01647 Bpe11g00077 ECH
Bpe10g00880 Bpe11g01647 ECH
Bpe11g01647 Bpe13g01406 ECH
Bpe11g00077 Bpe11g01647 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01647 Bpe-Chr11:12629830 Bpe15g01207 Bpe-Chr15:20770144 6.13E-114 dispersed
Bpe10g00880 Bpe-Chr10:14579466 Bpe11g01647 Bpe-Chr11:12629830 1.72E-153 wgd
Bpe11g01647 Bpe-Chr11:12629830 Bpe13g01406 Bpe-Chr13:19294928 1.86E-142 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01647 - - qsu:112006857 428.713