Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01651 ATGTTTAAGCGGCGGTTGTCGCCGTTGAAGAGCTCTGATCGAGCGGAAGAACAATCGTCGCCGGTCCCTCATTCGAAATCTGGGTTCACTGCAATGAAGGCGTTTCAGATCTTTGCTACTTTTCTGATTGCTCTTCCGTTTCTCATCGTTCTTTCTGTGTTTCTTGGGAGTGCGCCCGCTGATCGGTTTCTGGGATTTTCCGAAGCTAGAGTTCTCGAAAGAACAGTTGATGATGGCGCTTCTTCCGATTTGGGTTCAACGCATGAATTACCTCATTTCACCGACATGTCCGAAGATAAACTTATGGGAGGGCTTATTCTTCCTGGTTTTGACGAAGGATCTTGCCTAAGCAGGTACCAATCCTCGTCATATCGAAAAAAATCGTTGTACAAACCTTCACCTTATCTCCTGTCGAGACTTCGAAGGTATGAAACTCTCCACAAGCAGTGTGGACCTGGCACTAGTTCTTATGGCAATGCATTAAAGGAACTCAGGTCGAACCGAAGTCTCAGCTCTACGGAGTGTCAATATCTCGTTTGGATATCTTTTAGCGGCTTGGGGAACAGGATTCTCGCTTTGACAAGTGCATTTTTATACGCGCTCCTCACCAATCGAGTCCTACTTGTCGACCCGGGTAAAGACATGGTTGATCTTTTTTGCGAGCCGTTTCCTGACCGATCTTGGTTTCTACCGAATAACTTTCCCCTTCAGAATCAGTTTGATAAGTTTGATCAGAAATCTTCTCATTGTTATGGAAACATGCTGAAGCAAAACACCCTCGGCACCTCCACGGATCAGCTGCCTTCGTATTTATATCTCCATCTTGTCCATGATTATGACGATCATGACAAACTTTTCTTCTGCAGTCAAGATCAAGCGGTTATAGACAAAGTTGGTTGGTTAGTGATGAAGACAGATAACTATTTTGTGCCATCTTTGTTTTTGATGACGTCTTTCGAGCAAGAACTGAGTAAACTATTCCCGGAGAAGGACACAGTTTTTCACCACTTGGGTAGATATCTTTTCCATCCCAAAAATCACGTATGGGGACTAATAACTCGATACTATCAAGCCTATCTGAGCAAGTCAGACAAAAAGATTGGCATTCAAGTGAGAATCTTTGAAGACGGTCACGGCCCGTTTCAACACGTGATCGATCAAATTCTTAGATGTGTCTATAAAGAGAATTTACTACCGGAAGTTGATAAGCAAGGCTCTGTCATTGTTCCATCAAAAAACCCAAGATCAATCTCAGTTCTAATGACGTCTCTAGATTCTGGGTACTATGAAAAACTCAGGACGATGTATTGGGAAGACTCAACCGTCACCGGAGACATTGTCGGAGTTTACCAGCCGAGCCATGAACAGTTCCAACAGACCGAGAAAAGGGTGCACAATCGGAAGGCGTGGGCAGAGATGTATCTCCTGAGCCTGACCGACGCCCTAGTCACGAGTGCTTGGTCGACCTTCGGCTACGTAGCTCATGGTCTTGGAGGACTGAAACCAAGGATTCTTTTCAGGGCTCAAAATAAAACAGTGCCCGATCCTCCGTGTCTTCAGGTGATGTCGATGGAGCCTTGCTTTCACGCCCCACCGTTTTACGACTGCAAGGCAAAGAAAGGAATTGATACTGGTAAACTTGTTTCTCATGTCAGACATTGTGAAGATATAAGCTGGGGCCTTAAGCTAGTTGACGATCGTGATGGTTTATAG 1713 45.01 MFKRRLSPLKSSDRAEEQSSPVPHSKSGFTAMKAFQIFATFLIALPFLIVLSVFLGSAPADRFLGFSEARVLERTVDDGASSDLGSTHELPHFTDMSEDKLMGGLILPGFDEGSCLSRYQSSSYRKKSLYKPSPYLLSRLRRYETLHKQCGPGTSSYGNALKELRSNRSLSSTECQYLVWISFSGLGNRILALTSAFLYALLTNRVLLVDPGKDMVDLFCEPFPDRSWFLPNNFPLQNQFDKFDQKSSHCYGNMLKQNTLGTSTDQLPSYLYLHLVHDYDDHDKLFFCSQDQAVIDKVGWLVMKTDNYFVPSLFLMTSFEQELSKLFPEKDTVFHHLGRYLFHPKNHVWGLITRYYQAYLSKSDKKIGIQVRIFEDGHGPFQHVIDQILRCVYKENLLPEVDKQGSVIVPSKNPRSISVLMTSLDSGYYEKLRTMYWEDSTVTGDIVGVYQPSHEQFQQTEKRVHNRKAWAEMYLLSLTDALVTSAWSTFGYVAHGLGGLKPRILFRAQNKTVPDPPCLQVMSMEPCFHAPPFYDCKAKKGIDTGKLVSHVRHCEDISWGLKLVDDRDGL 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12665607 12668092 - Bpe004964.1 Bpe11g01651 111796

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01651 570 MobiDBLite consensus disorder prediction 1 24 - -
Bpe11g01651 570 Gene3D - 172 229 - -
Bpe11g01651 570 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 4 568 - -
Bpe11g01651 570 MobiDBLite consensus disorder prediction 1 20 - -
Bpe11g01651 570 Pfam Xyloglucan fucosyltransferase 96 537 IPR004938 GO:0008107|GO:0016020|GO:0042546
Bpe11g01651 570 PANTHER FUCOSYLTRANSFERASE 2-RELATED 4 568 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01651 K13681 FUT; xyloglucan fucosyltransferase [EC:2.4.1.-] - csv:101216541 759.599
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00399 Bpe-Chr11:3049667 Bpe11g01651 Bpe-Chr11:12665607 4.16E-177 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g967 . . . . . . Bma14g01656 . . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0939 Cone19ag0933 . . . . . . . . Bda07g01477 . Bpe11g01651 . . . . . . Cma04g01674 . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe11g01651 . 84 566 Xyloglucan Fucosyltransferase1 AT1G14080 54.7 5.4e-154 541.2
Bpe11g01651 . 97 567 Xyloglucan Fucosyltransferase1 AT1G14100 56.1 6.2e-155 544.3
Bpe11g01651 . 94 570 Xyloglucan Fucosyltransferase1 AT1G14110 52.3 8.2e-138 487.3
Bpe05g00368 . 1 512 Xyloglucan Fucosyltransferase1 AT1G49710 64.4 1.2e-190 662.9
Bpe07g00377 . 1 511 Xyloglucan Fucosyltransferase1 AT1G49710 63.8 7.7e-190 660.2
Bpe14g00406 . 1 403 Xyloglucan Fucosyltransferase1 AT1G71990 68.6 1.5e-161 565.8
Bpe11g01651 . 3 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.0 4.7e-180 627.9
Bpe11g01651 . 2 564 Xyloglucan Fucosyltransferase1 AT2G03220 59.8 8.3e-198 686.8
Bpe11g00399 . 8 489 Xyloglucan Fucosyltransferase1 AT2G03220 52.1 1.5e-146 516.5
Bpe11g01651 . 99 566 Xyloglucan Fucosyltransferase1 AT2G15350 51.8 5.4e-143 504.6
Bpe11g01651 . 94 566 Xyloglucan Fucosyltransferase1 AT2G15370 51.8 2.6e-140 495.7
Bpe11g01651 . 99 566 Xyloglucan Fucosyltransferase1 AT2G15390 53.9 5.2e-149 524.6
Bpe05g00368 . 1 512 Xyloglucan Fucosyltransferase1 AT3G19280 63.8 1.8e-188 655.6
Bpe07g00377 . 1 511 Xyloglucan Fucosyltransferase1 AT3G19280 63.5 2.4e-188 655.2
Bpe11g01651 . 3 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.0 4.7e-180 627.9
Bpe11g01651 . 2 564 Xyloglucan Fucosyltransferase1 AT2G03220 59.8 8.3e-198 686.8
Bpe11g00399 . 8 489 Xyloglucan Fucosyltransferase1 AT2G03220 52.1 1.5e-146 516.5
Bpe11g01651 . 3 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.0 4.7e-180 627.9
Bpe11g01651 . 99 566 Xyloglucan Fucosyltransferase1 AT2G15390 53.9 5.2e-149 524.6
Bpe11g01651 . 94 566 Xyloglucan Fucosyltransferase1 AT2G15370 51.8 2.6e-140 495.7
Bpe11g01651 . 84 566 Xyloglucan Fucosyltransferase1 AT1G14080 54.7 5.4e-154 541.2
Bpe11g01651 . 97 567 Xyloglucan Fucosyltransferase1 AT1G14100 56.1 6.2e-155 544.3
Bpe11g01651 . 94 570 Xyloglucan Fucosyltransferase1 AT1G14110 52.3 8.2e-138 487.3
Bpe11g01651 . 99 566 Xyloglucan Fucosyltransferase1 AT2G15350 51.8 5.4e-143 504.6
Bpe05g00368 . 1 512 Xyloglucan Fucosyltransferase1 AT3G19280 63.8 1.8e-188 655.6
Bpe07g00377 . 1 511 Xyloglucan Fucosyltransferase1 AT3G19280 63.5 2.4e-188 655.2
Bpe05g00368 . 1 512 Xyloglucan Fucosyltransferase1 AT1G49710 64.4 1.2e-190 662.9
Bpe07g00377 . 1 511 Xyloglucan Fucosyltransferase1 AT1G49710 63.8 7.7e-190 660.2
Bpe14g00406 . 1 403 Xyloglucan Fucosyltransferase1 AT1G71990 68.6 1.5e-161 565.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 1 2 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe11g01651 Bpe_Chr11 FPKM 7.714795 7.620844 48.352303 47.664692 6.95976 4.788066 7.269675 36.681702 39.635303 49.34647