Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01659 ATGTCCGATACCAATGACCCTGATCTCGCCGAGTATCTCGCCCGAGAAAATTCGTACGCTGATGCTTTTATGGTGGACACTAAGAATCTGCAACACGCTATGTTTTCGGAGATGGCCAGTCGAATCCCGGCTCAAATTTCCACTCCTCCTGAGCGTTGGGGATCTTGGTTGTACTACCAATACATTCCAGAGGGAAAGGAATACCCAGTTCTATGTAGAATGTTAGAAACAAAGGATAGCGGTTGGCTAAAGAGTTATGTTCATGTTGGTACATGTCGAGTTTCACCAGATCACCACTTTTTAGCATATACGGTTGATATAACTGGCAGTGAACATTTCATGCTTCAAATTAAAGACCTGAAAAGTGGCTTTGTTATCCAAAAATCACAGATAGAAAGGGTTGTGAGTTTGGCATGGGCTCGAGAAGGAAGAATGCTGTTCTACACTCAGTCAGATGAGAATCAAAGACCTTACAGGCAAAATTTGGTATACTGCACAGAAGTTGGAGGATGTGATATTGAAGATGTCTTGGTGTTTGAAGAAAGTGATTCCACAGTTTGTGTGGACATCACGAGCACAAAAGATGGGAAATTCATTACCGTTTATATAATAGATTCTTCCAACCCCCTTGGTGGTTTGCAAAGAATTAACAAACGCATTCCAGGTGTCCAATACTTTCTAGAACATCATAACGGTCTTTTCTACATTTTAACCAATGCTCCTTTGGGAAAGTTGAGTCGGCATTCTGGAGAAGGTTATTATCTTGCTAGATGTCGAGTTGAAGATATATTGACAGCAGATTGGCAGGATATCATCCTTCCAAGTGAACATCTCAGTTTTCAGGATTTGGACATTTTCAATGGACATTTGGTGCTTTTCGTTAATAAGAACAATGTGCCTATGCTATGCTCCATTAATTTACCTTTAAATATTAGTTATAAGAGCCAAATAGAAATTCAGAATCTTAATCCATGGTACTTCCCTCTACCCCCAAGTTCTTGCAGCGTTGTTCCGAGTTCCAACCATGACTTCATGGGTTCATTATATCGAGTGGTGCTGTCATCTCCTGTGATACCTGATGTTGTCGTCGATTATGACATGTCTAGACGAACGTTCTCGATTGTTCAGCAGGAGGAAGTTATGGGCGCCTTTCCTAATAAAAAATATTCATTGAGTCATAATGATAATGAACAAGTCCAGTTGGAGTCTCAAATGTGGAAATCCCTTTCTAATGCATATTGTTGCGAGAGAAAGGACGTTGTATCACGAGATGGGACGAAAATTCCTTTGACTTTGTTGTATTCTCGACTATCTTGGCAGAAAGCCCAATCTCCGGGTCTTTTACAAGGATATGGAGCATATGGAGAAGTTTTAGATAAGAGCTGGTGTTCCCATCGCCTTAGCTTACTTGATCGAGGTTTTTTAGTGGCACTAGCTGATGTGAGGGGTGGAGGTGGTGGCGACTCTTTTTGGCATAAAACTGGGAGTGGATTGTGCAAACAAAATTCAATTGATGACTTTGTATCATGTGCAAACTACTTAATAAATGAGGGTTATGTTCATAAAGACAGACTTGCTTCCATTGGATACAGCGCAGGTTGTCTTCTTGTTGGGGCTGCTATAAATATGTATCCAAATCTGTTTTCTGCTGCAATTTTGAAGGTACCCTTTCTTGATATATGCAACACACTGTCAGATCCTAGTTTACCCCTCACTGTCCTGGATTACGAAGAGTTTGGAAATCCAATGATTCAGAATCAGTTTGAGTATATTCTAAGTTATTCTCCTTATGATAACATTTCTCCCGCCAAGTGTTACCCGCCCATGCTCGTCCAAGCTTCATTTCTGGACTCCAGGGGAGTTTGGGAAGCTGCCAAATGGGTTGCCAAAATACGAGACGAGACGTGTTCTAGATGTTCTCGATCAACTATTTTAAAGACAAACATGGTCGGAGGACACTTTGGTGAAGGTGGACGACACGGTCAATGCGAAGAAATGGCATATGATTACGCGTTTCTAATAAAAGCAATGGGGATATCCGAGGAAAACTAA 2052 41.18 MSDTNDPDLAEYLARENSYADAFMVDTKNLQHAMFSEMASRIPAQISTPPERWGSWLYYQYIPEGKEYPVLCRMLETKDSGWLKSYVHVGTCRVSPDHHFLAYTVDITGSEHFMLQIKDLKSGFVIQKSQIERVVSLAWAREGRMLFYTQSDENQRPYRQNLVYCTEVGGCDIEDVLVFEESDSTVCVDITSTKDGKFITVYIIDSSNPLGGLQRINKRIPGVQYFLEHHNGLFYILTNAPLGKLSRHSGEGYYLARCRVEDILTADWQDIILPSEHLSFQDLDIFNGHLVLFVNKNNVPMLCSINLPLNISYKSQIEIQNLNPWYFPLPPSSCSVVPSSNHDFMGSLYRVVLSSPVIPDVVVDYDMSRRTFSIVQQEEVMGAFPNKKYSLSHNDNEQVQLESQMWKSLSNAYCCERKDVVSRDGTKIPLTLLYSRLSWQKAQSPGLLQGYGAYGEVLDKSWCSHRLSLLDRGFLVALADVRGGGGGDSFWHKTGSGLCKQNSIDDFVSCANYLINEGYVHKDRLASIGYSAGCLLVGAAINMYPNLFSAAILKVPFLDICNTLSDPSLPLTVLDYEEFGNPMIQNQFEYILSYSPYDNISPAKCYPPMLVQASFLDSRGVWEAAKWVAKIRDETCSRCSRSTILKTNMVGGHFGEGGRHGQCEEMAYDYAFLIKAMGISEEN 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12769811 12776220 - Bpe004972.1 Bpe11g01659 111804

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01659 683 Gene3D - 45 379 - -
Bpe11g01659 683 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 499 518 IPR002470 GO:0004252|GO:0006508
Bpe11g01659 683 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 529 549 IPR002470 GO:0004252|GO:0006508
Bpe11g01659 683 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 606 628 IPR002470 GO:0004252|GO:0006508
Bpe11g01659 683 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 471 495 IPR002470 GO:0004252|GO:0006508
Bpe11g01659 683 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 445 463 IPR002470 GO:0004252|GO:0006508
Bpe11g01659 683 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 587 602 IPR002470 GO:0004252|GO:0006508
Bpe11g01659 683 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 2 376 IPR023302 GO:0004252
Bpe11g01659 683 Pfam Prolyl oligopeptidase family 464 678 IPR001375 GO:0006508|GO:0008236
Bpe11g01659 683 PANTHER PROLYL OLIGOPEPTIDASE FAMILY PROTEIN 1 681 - -
Bpe11g01659 683 SUPERFAMILY Peptidase/esterase 'gauge' domain 1 382 - -
Bpe11g01659 683 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 1 681 - -
Bpe11g01659 683 SUPERFAMILY alpha/beta-Hydrolases 415 632 IPR029058 -
Bpe11g01659 683 Gene3D alpha/beta hydrolase 3 675 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01659 - - - qsu:112028758 976.467
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00328 Bpe-Chr2:2132110 Bpe11g01659 Bpe-Chr11:12769811 3.47E-25 dispersed
Bpe11g01659 Bpe-Chr11:12769811 Bpe15g00353 Bpe-Chr15:15062923 1.22E-169 dispersed
Bpe11g01659 Bpe-Chr11:12769811 Bpe04g00268 Bpe-Chr4:1742924 3.23E-30 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g992 . . . . . . Bma14g01669 . Cmo04g01649 . . . Car04g01626 . . . Cpe01g01398 Bhi07g01448 . . . . . . . . . . . . . . . . . . Csa05g02531 Chy10g01075 Cme10g01398 . Blo11g00797 Bda07g01492 . Bpe11g01659 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007009 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 2 1 1 3 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe11g01659 Bpe_Chr11 FPKM 15.161095 16.651043 6.256404 6.230418 4.671549 5.634886 6.144294 31.104074 30.683865 32.491665