Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01690 ATGGATGGAAGTAGCGTTGATGAAAGCACGGCAAGCGAATCCACCTCTATTTCTCCTGTTAGTCCGCTCGCTTTTCCGGTCACAAAGTGTTCTTCGCCGCCGGTGGGTCTGTCCAGAGTGCGCAGCGGAGCTAGTGTCGTCGTCGACTCCGATCCGTCCACCGGCGTTGAGGCGGAGTCGAGAAAGCTGCCTTCTTCCAGGTTCAAGGGGGTGGTGCCGCAGCCGAATGGGCGGTGGGGAGCGCAGATTTACGAGAAGCACCAGCGAGTCTGGCTCGGCACTTTCAACGAGGAGGACGAGGCAGCCAGAGCCTACGACATCGCCGCCCAACGCTTCCGCGGTCGCGATGCCGTCACTAATTTCAAGCCACTTGCCGACACCGCCGACGACGAAATCGAGTCGGCGTTTCTTAGTTCCCATTCGAAATCTGAGATTGTCGATATGCTACGTAAGCATACTTACCGCGATGAGCTGCAGCAGAGCAAACGAAAAAATGGGTTACTCGACGGCTCCGGGAAACGAAGATCCCTCGGGCTAACGGGCACAGGACAGGACCGAGACTCCAAGACCCGTGAACTGCTTTTCGAGAAGGCGGTGACGCCCAGCGACGTTGGAAAACTGAACCGCCTGGTGATCCCGAAGCAGCACGCGGAGAAACATTTCCCGTTGCAGAGCGGAACCGCGTCATCCAATGGCGTGCTTCTCAACCTCGAGGATATCGGAGGAAAAGTATGGCGATTCCGCTACTCCTACTGGAATAGCAGCCAAAGCTACGTTTTGACAAAAGGGTGGAGCCGCTTCGTCAAGGAGAAGAATCTCCACGCTGGAGACGTAGTCTCCTTTCTCCGGTCAACCGGACAGGATAAACAGCTCTACATTGACTTTAAGGCTCCGAATGGATCGGCGGCGATGATGGGTGAATCAAACCCAGCGCCAACGGTTCAAGTAGTAAGACTCTTTGGGGTGAACATTTTGAAAGTACCTGGACATGGTGGTAGTAATATGGACGGCGCCGTCTTAATGGGTGGTTGCTATGGGAAAAGAATAAGAGATCAGGTTGAGCTTTTAGCTTTAGAGTGCAGTAAAAAACAAAGGGTAGTCGGAGCTTTGTGA 1113 54.18 MDGSSVDESTASESTSISPVSPLAFPVTKCSSPPVGLSRVRSGASVVVDSDPSTGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDIAAQRFRGRDAVTNFKPLADTADDEIESAFLSSHSKSEIVDMLRKHTYRDELQQSKRKNGLLDGSGKRRSLGLTGTGQDRDSKTRELLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGTASSNGVLLNLEDIGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLHAGDVVSFLRSTGQDKQLYIDFKAPNGSAAMMGESNPAPTVQVVRLFGVNILKVPGHGGSNMDGAVLMGGCYGKRIRDQVELLALECSKKQRVVGAL 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13188925 13190037 + Bpe005004.1 Bpe11g01690 111835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01690 370 SUPERFAMILY DNA-binding domain 66 122 IPR016177 GO:0003677
Bpe11g01690 370 CDD B3_DNA 194 281 IPR003340 GO:0003677
Bpe11g01690 370 SMART rav1_2 67 128 IPR001471 GO:0003700|GO:0006355
Bpe11g01690 370 SUPERFAMILY DNA-binding pseudobarrel domain 191 288 IPR015300 -
Bpe11g01690 370 Gene3D AP2/ERF domain 66 123 IPR036955 GO:0003700|GO:0006355
Bpe11g01690 370 ProSiteProfiles AP2/ERF domain profile. 67 122 IPR001471 GO:0003700|GO:0006355
Bpe11g01690 370 Pfam AP2 domain 67 114 IPR001471 GO:0003700|GO:0006355
Bpe11g01690 370 PANTHER PROTEIN RAV1, PUTATIVE-RELATED 1 370 - -
Bpe11g01690 370 SMART B3_2 195 299 IPR003340 GO:0003677
Bpe11g01690 370 MobiDBLite consensus disorder prediction 1 26 - -
Bpe11g01690 370 MobiDBLite consensus disorder prediction 157 190 - -
Bpe11g01690 370 CDD AP2 66 121 IPR001471 GO:0003700|GO:0006355
Bpe11g01690 370 Pfam B3 DNA binding domain 195 293 IPR003340 GO:0003677
Bpe11g01690 370 MobiDBLite consensus disorder prediction 1 22 - -
Bpe11g01690 370 MobiDBLite consensus disorder prediction 41 62 - -
Bpe11g01690 370 Gene3D - 183 306 IPR015300 -
Bpe11g01690 370 ProSiteProfiles B3 DNA-binding domain profile. 195 299 IPR003340 GO:0003677
Bpe11g01690 370 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 370 IPR044800 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe10g00947 Bpe11g01690 CCT
Bpe10g00947 Bpe11g01690 ECH
Bpe02g02282 Bpe11g01690 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00381 Bpe-Chr11:2890171 Bpe11g01690 Bpe-Chr11:13188925 2.11E-45 dispersed
Bpe11g01690 Bpe-Chr11:13188925 Bpe13g00799 Bpe-Chr13:14351945 8.10E-42 dispersed
Bpe01g00642 Bpe-Chr1:4328387 Bpe11g01690 Bpe-Chr11:13188925 1.16E-53 transposed
Bpe02g01300 Bpe-Chr2:16518949 Bpe11g01690 Bpe-Chr11:13188925 2.58E-12 transposed
Bpe03g00937 Bpe-Chr3:29034603 Bpe11g01690 Bpe-Chr11:13188925 5.00E-11 transposed
Bpe10g00947 Bpe-Chr10:15006814 Bpe11g01690 Bpe-Chr11:13188925 0 transposed
Bpe11g00900 Bpe-Chr11:6679200 Bpe11g01690 Bpe-Chr11:13188925 1.38E-54 transposed
Bpe11g01690 Bpe-Chr11:13188925 Bpe02g02282 Bpe-Chr2:23612580 2.79E-151 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22142 PF02362 B3 7.10E-28 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01690 K09287 - pvy:116107511 489.574