Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01691 ATGGCGATCTGTCCCTTAATCGTGCATGGTGTCTCTCTGCAACTTTCATCTCCCTTCTATGGCGAAGCCTCATCGTCTTCATTAAAATCATCGTACATAGTGGACACCCCATTTTCCTTCTCACCGACTTCGCCTACTGGAAAACCATCACGTTTTCATAAGCAGCTTGTCATTTTTTCGAAGAGAATTTCGGGTTTGGAGGAGGCTATGAGAATTCGAAGAGAAAGAGAGCTTCAAAGTGTGACTAAAGTTAAAAGGAGGCTGCCTTTAAGGCGAGGAAGGGTGTCCCCACGTCTCCCTGTACCTGACCACATATTAAAGCCTCCTTATGTTGGCTCCCCCATTTTACCGGAAATTTCAAAGGATTTTCAAATTCATGATTCTGAAGGCATTGAGCATATGAGAGCGGCATGTGAGCTTGCTGCACGCGTCTTAGACTATGCAGGAACACTAGTTAAGCCGTCTATAACAACAAATGAGATTGACAAAGCAGTGCACCAGATGATCATCGAGGCAGGTGCTTATCCATCACCTCTTGGCTACGGGGGATTCCCAAAAAGCGTGTGCACTTCAGTAAATGAGTGCATGTGCCATGGAATACCAGACTCTCGCCAGTTGCAGAATGGGGATATAATAAATATCGACGTCACGGTTTATCTAAATGGATACCATGGAGACACATCGAAGATGTATTTCTGTGGCGATGTTAGTGATGGAATGAGACGATTGGTTAAGGTAACGGAGGAATGCTTGGAGAAAGGCATAGCTGTTTGCAAAGATGGTGCTAGTTTTAGTAAAATTGGAAAGAGAATTAGCGAGCATGCCGAAAAATATGGTTTTGGAGTGGTGGAGCGATTTGTCGGACATGGTGTTGGGACTGTCTTTCACTCAGAGCCCCTTATCTTTCATGATCGTAACGAGCAACCAGGTCGCATGGTGGAGGGTCAAACATTTACAATTGAGCCAATTCTTACAATGGGAAGCACAGACTGCACTACCTGGCTGGACAACTGGACCACTCTAACAACTGACGGCAGCCCTGCTGCTCAGTTTGAGCACACTATCTTAATTACTCGAACAGGAGCCGAAATTTTAACAAAATGTTGA 1107 44.99 MAICPLIVHGVSLQLSSPFYGEASSSSLKSSYIVDTPFSFSPTSPTGKPSRFHKQLVIFSKRISGLEEAMRIRRERELQSVTKVKRRLPLRRGRVSPRLPVPDHILKPPYVGSPILPEISKDFQIHDSEGIEHMRAACELAARVLDYAGTLVKPSITTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQNGDIINIDVTVYLNGYHGDTSKMYFCGDVSDGMRRLVKVTEECLEKGIAVCKDGASFSKIGKRISEHAEKYGFGVVERFVGHGVGTVFHSEPLIFHDRNEQPGRMVEGQTFTIEPILTMGSTDCTTWLDNWTTLTTDGSPAAQFEHTILITRTGAEILTKC 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13192096 13197010 + Bpe005005.1 Bpe11g01691 111836

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01691 368 CDD MetAP1 131 367 IPR002467 GO:0006508|GO:0070006
Bpe11g01691 368 TIGRFAM met_pdase_I: methionine aminopeptidase, type I 125 367 IPR002467 GO:0006508|GO:0070006
Bpe11g01691 368 Gene3D Creatinase/methionine aminopeptidase superfamily 89 368 IPR036005 -
Bpe11g01691 368 PRINTS Methionine aminopeptidase-1 signature 280 292 IPR001714 -
Bpe11g01691 368 PRINTS Methionine aminopeptidase-1 signature 210 226 IPR001714 -
Bpe11g01691 368 PRINTS Methionine aminopeptidase-1 signature 310 322 IPR001714 -
Bpe11g01691 368 PRINTS Methionine aminopeptidase-1 signature 188 201 IPR001714 -
Bpe11g01691 368 PANTHER METHIONINE AMINOPEPTIDASE 12 367 - -
Bpe11g01691 368 PANTHER METHIONINE AMINOPEPTIDASE 12 367 - -
Bpe11g01691 368 Hamap Methionine aminopeptidase [map]. 123 368 IPR002467 GO:0006508|GO:0070006
Bpe11g01691 368 Pfam Metallopeptidase family M24 132 358 IPR000994 -
Bpe11g01691 368 SUPERFAMILY Creatinase/aminopeptidase 84 367 IPR036005 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01691 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] - csv:101213374 583.948
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01416 Bpe-Chr11:10531799 Bpe11g01691 Bpe-Chr11:13192096 2.13E-06 dispersed
Bpe11g01691 Bpe-Chr11:13192096 Bpe14g00894 Bpe-Chr14:6672276 1.02E-88 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g267 . . . . . . Bma14g01698 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0467 Cone9ag0479 . . . . . Blo11g00831 . . Bpe11g01691 . . . . . . . . . . . . Bhi12g01373 . . . . . Lcy10g0912 . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002340 1 1 2 1 1 2 0 2 2 2 2 2 2 2 2 2 2 3 2 2 2 3 3 2 3 2 1 5 1 2 59
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe11g01691 Bpe_Chr11 FPKM 14.130554 14.787489 20.037178 17.702419 4.14793 4.289756 4.513062 2.516089 2.27737 2.12634