Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01706 ATCGAGAGAGAATCCCTAAAAATGGAGGTGGCAGAAGCAGCAACTGGTAATCAATTGAAGCTGTATTCGTATTTTAGGAGTTCATGCTCCTTTCGCGTTCGAATCGCCCTGAATTTGAAAGGTCTTAAATACGACTACCACGCCGTCAACTTGCTCAAAGGGGAGCAACACGACCCCGAGTTTACTAAGCTCAATCCTATTGGCTACGTACCTGTGCTGGTTGACGGAAATACAGTACTTGCCGACTCTTTTGCCATCTTAATGTATCTGGACTCTAAGTATCCTCAGCATCCACTTCTGCCTCAGAACCTTTACACAAGAGCAATCAACTATCAGGCTGCAAATATTGTATCTTCAAGCATACAACCTCTTCAGAATATACCTGTCTTGAAGTATCTAGACGAAAATGTTGGTCCTGATGAAAAACTTCTCTGGGTTCAACATCATATTGGAAAAGGTTTTGCAGCACTCGAAAAGCTGTTAAAAGAGCATGCTGGAGAATATGCTACTGGTGATGAAGTTTTCTTGGCAGACATATTTCTGGCACCTCAGATTCATGCAGGGGTTACAAGATTCAGTATTGACATGTCCCAGTTCCCTCTTTTGTCCACATTGTACGAGGCTTATAAAGAGATACCAGCTTTTCGAGATGCCATGCCCGAAAATCAACCTGATTTTCCTCCAAAAGTCATCAACTGA 699 42.63 IERESLKMEVAEAATGNQLKLYSYFRSSCSFRVRIALNLKGLKYDYHAVNLLKGEQHDPEFTKLNPIGYVPVLVDGNTVLADSFAILMYLDSKYPQHPLLPQNLYTRAINYQAANIVSSSIQPLQNIPVLKYLDENVGPDEKLLWVQHHIGKGFAALEKLLKEHAGEYATGDEVFLADIFLAPQIHAGVTRFSIDMSQFPLLSTLYEAYKEIPAFRDAMPENQPDFPPKVIN 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13332090 13336352 + Bpe005019.1 Bpe11g01706 111851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01706 232 SFLD Glutathione Transferase (cytosolic) 19 210 IPR040079 -
Bpe11g01706 232 SUPERFAMILY GST C-terminal domain-like 98 228 IPR036282 -
Bpe11g01706 232 CDD GST_C_Zeta 107 223 IPR034330 -
Bpe11g01706 232 Gene3D Glutaredoxin 16 102 - -
Bpe11g01706 232 PANTHER MALEYLACETOACETATE ISOMERASE 16 227 - -
Bpe11g01706 232 Pfam Glutathione S-transferase, N-terminal domain 21 97 IPR004045 -
Bpe11g01706 232 Gene3D - 103 229 - -
Bpe11g01706 232 PANTHER S-CRYSTALLIN-RELATED 16 227 - -
Bpe11g01706 232 ProSiteProfiles Glutaredoxin domain profile. 7 107 - -
Bpe11g01706 232 SFLD Main (cytGST) 19 210 - -
Bpe11g01706 232 SUPERFAMILY Thioredoxin-like 17 102 IPR036249 -
Bpe11g01706 232 TIGRFAM maiA: maleylacetoacetate isomerase 20 226 IPR005955 GO:0003824|GO:0005737|GO:0009072
Bpe11g01706 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 17 98 IPR004045 -
Bpe11g01706 232 CDD GST_N_Zeta 19 91 IPR034333 -
Bpe11g01706 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 103 228 IPR010987 -
Bpe11g01706 232 Pfam Glutathione S-transferase, C-terminal domain 142 214 IPR004046 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01239 Bpe-Chr11:9239967 Bpe11g01706 Bpe-Chr11:13332090 1.08E-11 dispersed
Bpe11g01706 Bpe-Chr11:13332090 Bpe13g00917 Bpe-Chr13:15139484 1.16E-94 dispersed
Bpe15g01095 Bpe-Chr15:20129788 Bpe11g01706 Bpe-Chr11:13332090 1.74E-06 dispersed
Bpe11g01706 Bpe-Chr11:13332090 Bpe02g00874 Bpe-Chr2:6728495 3.88E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01706 K01800 - jre:108996938 336.265