Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01719 ATGGCTGCGTCTTCATCATCAGTACCATTTCTGGGAATTAGAGAAGAAGAACAAAACCTGATGAGGCAACAACATTCATCCACACCCAGTTCATCTGCAACTCCGGCTGCACCTGCCCAGAAAAAAAAGAGGAATCAACCAGGAACACCAAGCAAATATTTTGTGTTTTTTTCTTTTTTGTTTTCAGATCCAGATGCAGAGGTAATAGCACTATCTCCAAAAACACTAATGGCCACAAACAGGTTCATATGCGAGGTATGCAACAAAGGGTTTCAAAGGGAGCAAAATCTACAGCTCCACAGAAGAGGACATAACCTACCTTGGAAGCTAAAGCAGAAGACTACAAAAGAGCCGAAGAGGAAGGTTTACCTCTGTCCTGAGCCCACATGCGTCCACCATGAACCTTCAAGAGCCCTAGGCGATCTTACAGGAATCAAAAAACACTACTCTCGCAAGCATGGTGAGAAGAAATGGAAGTGCGAGAAGTGTTCCAAAAGGTATGCTGTTCAGTCCGATTGGAAGGCTCATTCTAAAACCTGTGGAACGAGGGAGTATCGATGCGACTGTGGCACTCTTTTCTCAAGGCGAGACAGCTTCATCACCCACCGCGCTTTCTGTGACGCATTGGCCCAAGAAACTGCGAGACACCCGGTATCCTTGACGACCTCCATTGGAGGCCGTTTGTACGGAGGTGGTAGCAATGTAGGCTCAGGGTTATCTCAAGTGGGGCAACAAATCTCTTCCTTACAAGATCAAACCAACCGGCCGACCGATATTTTATGCCTCGGAAGCGGCGGTGGACGGACCGGGCAATTCAACAGTCTCCTTCACGGCCAGTCGATCGCATCTTCGTTTCGCCCTCCTCAACCTTCAATGGCTTCCTCAGCTTTCTTCATGACTGATCAAACTAATCAGAATTTTCACGAAGAAAGCCTCTCTCAACAAGGGTTGCTCCAGAACAAATCATTTCATGGGCTCATGCAGTATTCTGACCTCCAATCCAATCCAAACACTTCTTCAAACCCAAACCTCTTCAACCTAGAGTTTCTATCGAACTCCAACAGCAATACAGAGAACAACGACAACAATAACAGCAATGTTGGATCCGCAGGTTTCTTAATGTCTAATCAGTTCAACGTCGGAGCAAACGGAAATGGAAGTGAAGCTCCGACTATATTTGCAATGGCGGATCAAGTCGGCTCTAATGCAGTTCCTTCTCTCTACACGAAATCTATGCAGAACAACGCCAACATTCCTCACATGTCAGCCACGGCTCTTCTTCAAAAGGCAGCTCAATTAGGCTCGACCTCGTCGGCGAACAACACTGGCGCGTCATTGCTCCGATCATTCGGCAGCACTTCCTCCGGAGTACCAAAATCAGAAAGGTCAATGCTTCCCACTAATATGAACACCATTTTCAGCGAAAACGAGCACCACCATCTCCAAGACCTGATGAACTCATATGACACCGGAAACTCCGCATTTTTCTCAGGCGGGCCGGGAGGAATCACAGGGTTTGGTGGGTATGACGGTAGCAGAAGCAGCCTAGAAAATTTAGAAGAGCCAAAACTTCATCAAACTCCATCAGTCAGCATCGGTGGATCAGATAGGTTAACCAGAGACTTCCTAGGAGTTGGACAAATTGTTAGAACCATGAGCGGAGGATTTTCTCATCGAGAACAAAAACAACAGCAACATGGAATCGACCATATTTCCTCCATTAACGCAGACCAGAACAGTAACGCAGCAGCTTCGTCGAGCCATTCCTACGGAGTAGGAGGACGAAGAGGGGGTTTTCAATGA 1803 47.03 MAASSSSVPFLGIREEEQNLMRQQHSSTPSSSATPAAPAQKKKRNQPGTPSKYFVFFSFLFSDPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHEPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQETARHPVSLTTSIGGRLYGGGSNVGSGLSQVGQQISSLQDQTNRPTDILCLGSGGGRTGQFNSLLHGQSIASSFRPPQPSMASSAFFMTDQTNQNFHEESLSQQGLLQNKSFHGLMQYSDLQSNPNTSSNPNLFNLEFLSNSNSNTENNDNNNSNVGSAGFLMSNQFNVGANGNGSEAPTIFAMADQVGSNAVPSLYTKSMQNNANIPHMSATALLQKAAQLGSTSSANNTGASLLRSFGSTSSGVPKSERSMLPTNMNTIFSENEHHHLQDLMNSYDTGNSAFFSGGPGGITGFGGYDGSRSSLENLEEPKLHQTPSVSIGGSDRLTRDFLGVGQIVRTMSGGFSHREQKQQQHGIDHISSINADQNSNAAASSSHSYGVGGRRGGFQ 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13511914 13515713 + Bpe005034.1 Bpe11g01719 111864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01719 600 SUPERFAMILY beta-beta-alpha zinc fingers 81 178 IPR036236 -
Bpe11g01719 600 Gene3D Classic Zinc Finger 62 132 - -
Bpe11g01719 600 MobiDBLite consensus disorder prediction 579 600 - -
Bpe11g01719 600 MobiDBLite consensus disorder prediction 1 47 - -
Bpe11g01719 600 SMART c2h2final6 123 153 IPR013087 -
Bpe11g01719 600 SMART c2h2final6 82 104 IPR013087 -
Bpe11g01719 600 SMART c2h2final6 158 178 IPR013087 -
Bpe11g01719 600 MobiDBLite consensus disorder prediction 22 47 - -
Bpe11g01719 600 Pfam Zinc-finger double-stranded RNA-binding 82 104 IPR022755 -
Bpe11g01719 600 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 561 - -
Bpe11g01719 600 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Bpe11g01719 600 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 561 - -
Bpe11g01719 600 Gene3D Classic Zinc Finger 134 215 - -
Bpe11g01719 600 MobiDBLite consensus disorder prediction 329 368 - -
Bpe11g01719 600 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 104 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00383 Bpe-Chr10:11416587 Bpe11g01719 Bpe-Chr11:13511914 6.97E-102 dispersed
Bpe10g00958 Bpe-Chr10:15117947 Bpe11g01719 Bpe-Chr11:13511914 2.29E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22145 PF12171 zf-C2H2_jaz 3.70E-05 CL0361 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01719 K25870 - jre:109006348 706.442