Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01736 ATGTCCATATTGTGCTCTTCCGATTGCTTCTCCGACCTTTTGTGCGATGAGGATTCATCCGGATTCTTGTCCAGAGATTCACTGAAATGCTCGTCGGAAATCGAGTGTGCTTCGGACGTTGAGGAGTCAATCGCTGCTTGTATCAAAGAGGAGAGGCAATTCGTGCCTGGTTTCGACTACTTCTCTCGATTTCAGACGAGTTCTCTGGACGCATCTGCCAGAGCGGATTCTGTTGCATGGATTCTCCTGGTTCAAGCCTACTATGGTTTCCATCCATTGACGGCGTATCTGGCTGTTAACTACTTGGATCGGTTCATCTATTCGCATCGTTTGCCGCAAGCAAATGGGTGGCCTTTTCAACTTTTATCTGTTGCTTGCTTGTCACTAGCAGCTAAAATGGAGGAGCCTTTGGCTCCTTGTTTATTGGACCTTCAGGTTGACGGAGCCAAATATTTATTTGAACCCAAAACAATATGTATGGTGGAGCTTCTTGTGCTGAGAGTCCTAGATTGGCGGTTGAGATCCATAACGCCATACAATTTTATTGAATTCTTCGCGTTCAAGGTTGATCCTACAGGAACTTTCATCAGGTTTCTAATCTCAAGAGCCTCTGATATTATCTTATCCAGTATCGAAGAAACTAGTTTCCTGGAATACCGACCATCATGCATAGCTGCCACAGCTTTACTTTGTGCAACAAATGAAATCCCAAGTTTACCTCTAGTTAATCCGGAAGATGCTGAATTATGGTGCAATGGATTAAGCAAAGAAAGACTCATCAAATGCTATCAGTTAACGCAAAAATTGGCGCTTCATGGTAGCCTTAAGAAGCCCCCTAAAATCTTACCGCAGCTCGGAGTTACACTTCAGGCTGAAATGAGGCTGATTGACTCATCTCCTCTCCCCTTCTCGTCCTCATCCATGTCTCATAAGAGGAGAAAATTAAGTACCTGCTTGTGGGTAGTTAACGACAAAGGAAACTCGGAGTGA 990 44.34 MSILCSSDCFSDLLCDEDSSGFLSRDSLKCSSEIECASDVEESIAACIKEERQFVPGFDYFSRFQTSSLDASARADSVAWILLVQAYYGFHPLTAYLAVNYLDRFIYSHRLPQANGWPFQLLSVACLSLAAKMEEPLAPCLLDLQVDGAKYLFEPKTICMVELLVLRVLDWRLRSITPYNFIEFFAFKVDPTGTFIRFLISRASDIILSSIEETSFLEYRPSCIAATALLCATNEIPSLPLVNPEDAELWCNGLSKERLIKCYQLTQKLALHGSLKKPPKILPQLGVTLQAEMRLIDSSPLPFSSSSMSHKRRKLSTCLWVVNDKGNSE 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13729051 13731247 - Bpe005052.2 Bpe11g01736 111881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01736 329 SMART cyclin_7 79 167 IPR013763 -
Bpe11g01736 329 Gene3D - 57 174 - -
Bpe11g01736 329 SMART Cyclin_C_2 176 284 IPR004367 -
Bpe11g01736 329 CDD CYCLIN 74 146 IPR013763 -
Bpe11g01736 329 Pfam Cyclin, N-terminal domain 45 173 IPR006671 -
Bpe11g01736 329 Gene3D - 46 237 - -
Bpe11g01736 329 Pfam Cyclin, C-terminal domain 176 271 IPR004367 -
Bpe11g01736 329 ProSitePatterns Cyclins signature. 74 105 IPR006671 -
Bpe11g01736 329 PANTHER CYCLIN-D1-1 5 318 - -
Bpe11g01736 329 SUPERFAMILY Cyclin-like 161 271 IPR036915 -
Bpe11g01736 329 PANTHER CYCLINS 5 318 IPR039361 -
Bpe11g01736 329 SUPERFAMILY Cyclin-like 34 173 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00467 Bpe-Chr5:18996730 Bpe11g01736 Bpe-Chr11:13729051 1.49E-57 dispersed
Bpe07g00284 Bpe-Chr7:2041057 Bpe11g01736 Bpe-Chr11:13729051 2.16E-58 dispersed
Bpe11g01736 Bpe-Chr11:13729051 Bpe13g01449 Bpe-Chr13:19750201 7.09E-126 dispersed
Bpe10g00825 Bpe-Chr10:14275298 Bpe11g01736 Bpe-Chr11:13729051 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01736 K18810 - vvi:100255261 429.869