Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01736 | ATGTCCATATTGTGCTCTTCCGATTGCTTCTCCGACCTTTTGTGCGATGAGGATTCATCCGGATTCTTGTCCAGAGATTCACTGAAATGCTCGTCGGAAATCGAGTGTGCTTCGGACGTTGAGGAGTCAATCGCTGCTTGTATCAAAGAGGAGAGGCAATTCGTGCCTGGTTTCGACTACTTCTCTCGATTTCAGACGAGTTCTCTGGACGCATCTGCCAGAGCGGATTCTGTTGCATGGATTCTCCTGGTTCAAGCCTACTATGGTTTCCATCCATTGACGGCGTATCTGGCTGTTAACTACTTGGATCGGTTCATCTATTCGCATCGTTTGCCGCAAGCAAATGGGTGGCCTTTTCAACTTTTATCTGTTGCTTGCTTGTCACTAGCAGCTAAAATGGAGGAGCCTTTGGCTCCTTGTTTATTGGACCTTCAGGTTGACGGAGCCAAATATTTATTTGAACCCAAAACAATATGTATGGTGGAGCTTCTTGTGCTGAGAGTCCTAGATTGGCGGTTGAGATCCATAACGCCATACAATTTTATTGAATTCTTCGCGTTCAAGGTTGATCCTACAGGAACTTTCATCAGGTTTCTAATCTCAAGAGCCTCTGATATTATCTTATCCAGTATCGAAGAAACTAGTTTCCTGGAATACCGACCATCATGCATAGCTGCCACAGCTTTACTTTGTGCAACAAATGAAATCCCAAGTTTACCTCTAGTTAATCCGGAAGATGCTGAATTATGGTGCAATGGATTAAGCAAAGAAAGACTCATCAAATGCTATCAGTTAACGCAAAAATTGGCGCTTCATGGTAGCCTTAAGAAGCCCCCTAAAATCTTACCGCAGCTCGGAGTTACACTTCAGGCTGAAATGAGGCTGATTGACTCATCTCCTCTCCCCTTCTCGTCCTCATCCATGTCTCATAAGAGGAGAAAATTAAGTACCTGCTTGTGGGTAGTTAACGACAAAGGAAACTCGGAGTGA | 990 | 44.34 | MSILCSSDCFSDLLCDEDSSGFLSRDSLKCSSEIECASDVEESIAACIKEERQFVPGFDYFSRFQTSSLDASARADSVAWILLVQAYYGFHPLTAYLAVNYLDRFIYSHRLPQANGWPFQLLSVACLSLAAKMEEPLAPCLLDLQVDGAKYLFEPKTICMVELLVLRVLDWRLRSITPYNFIEFFAFKVDPTGTFIRFLISRASDIILSSIEETSFLEYRPSCIAATALLCATNEIPSLPLVNPEDAELWCNGLSKERLIKCYQLTQKLALHGSLKKPPKILPQLGVTLQAEMRLIDSSPLPFSSSSMSHKRRKLSTCLWVVNDKGNSE | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 13729051 | 13731247 | - | Bpe005052.2 | Bpe11g01736 | 111881 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01736 | 329 | SMART | cyclin_7 | 79 | 167 | IPR013763 | - | |
Bpe11g01736 | 329 | Gene3D | - | 57 | 174 | - | - | |
Bpe11g01736 | 329 | SMART | Cyclin_C_2 | 176 | 284 | IPR004367 | - | |
Bpe11g01736 | 329 | CDD | CYCLIN | 74 | 146 | IPR013763 | - | |
Bpe11g01736 | 329 | Pfam | Cyclin, N-terminal domain | 45 | 173 | IPR006671 | - | |
Bpe11g01736 | 329 | Gene3D | - | 46 | 237 | - | - | |
Bpe11g01736 | 329 | Pfam | Cyclin, C-terminal domain | 176 | 271 | IPR004367 | - | |
Bpe11g01736 | 329 | ProSitePatterns | Cyclins signature. | 74 | 105 | IPR006671 | - | |
Bpe11g01736 | 329 | PANTHER | CYCLIN-D1-1 | 5 | 318 | - | - | |
Bpe11g01736 | 329 | SUPERFAMILY | Cyclin-like | 161 | 271 | IPR036915 | - | |
Bpe11g01736 | 329 | PANTHER | CYCLINS | 5 | 318 | IPR039361 | - | |
Bpe11g01736 | 329 | SUPERFAMILY | Cyclin-like | 34 | 173 | IPR036915 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe05g00467 | Bpe-Chr5:18996730 | Bpe11g01736 | Bpe-Chr11:13729051 | 1.49E-57 | dispersed | |
Bpe07g00284 | Bpe-Chr7:2041057 | Bpe11g01736 | Bpe-Chr11:13729051 | 2.16E-58 | dispersed | |
Bpe11g01736 | Bpe-Chr11:13729051 | Bpe13g01449 | Bpe-Chr13:19750201 | 7.09E-126 | dispersed | |
Bpe10g00825 | Bpe-Chr10:14275298 | Bpe11g01736 | Bpe-Chr11:13729051 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01736 | K18810 | - | vvi:100255261 | 429.869 |