Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01741 ATGGCGACAAATGGCGTGGCTTCGTGGACATCTAGGTTGGAAAAGATTGACAGTGGTTGCGGCGGTCTATTTTCGCCTTCTGATTCAGATGAAGTTCACGTTCTCGCCGTTGATGACAGTTTGATCGATCGGACGGTGATCGAGCGCTTGCTCAAAACTTCGTGCTGTAAAGTTACGGCGGTGGATAGCGGGAGGAGAGCTCTGCAATACCTCGGGTTGGACGAGGAAACAAGCTCCTCCGACGAGTACGATGGTGTGAAAGTGGACATGATCATCACTGATTATTGCATGCCCGGGATGACAGGCTTCGAGTTGCTTAAGAAAATTAAGGAATCATCTTCGCGAAGACAGATACCAGTGGTAATTATGTCGTCCGAAAACATATTAGCGCGAGTAGACAGGTGTTTGGAAGAAGGCGCAGAGGATTTCATAGTGAAGCCGGTGAAATTATCAGATGTGGAACGGCTCAGGGACAACATGAGGAGAGAGGGCGTCAAGGACCCTATAAATGAGGTTAGCAGTGGGGTCCATAAGAGGAAAGTACGAGACTCTGCAGTCGTGGTTTCATCATCATCACCGTCCATCTCATCGTCCTCGAGATCACCTTCATCTTGTTCATCGTCATCCTCAGTTCCATCTTGTTCACCCACGTCGCTCGATTCGCCGATCCGACGGCTCAAATTGACCACCACAGATTAA 699 49.21 MATNGVASWTSRLEKIDSGCGGLFSPSDSDEVHVLAVDDSLIDRTVIERLLKTSCCKVTAVDSGRRALQYLGLDEETSSSDEYDGVKVDMIITDYCMPGMTGFELLKKIKESSSRRQIPVVIMSSENILARVDRCLEEGAEDFIVKPVKLSDVERLRDNMRREGVKDPINEVSSGVHKRKVRDSAVVVSSSSPSISSSSRSPSSCSSSSSVPSCSPTSLDSPIRRLKLTTTD 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13784786 13785808 + Bpe005058.1 Bpe11g01741 111886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01741 232 MobiDBLite consensus disorder prediction 185 232 - -
Bpe11g01741 232 SUPERFAMILY CheY-like 32 156 IPR011006 -
Bpe11g01741 232 SMART REC_2 32 157 IPR001789 GO:0000160
Bpe11g01741 232 ProSiteProfiles Response regulatory domain profile. 33 161 IPR001789 GO:0000160
Bpe11g01741 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 25 231 IPR045279 GO:0009736
Bpe11g01741 232 MobiDBLite consensus disorder prediction 171 232 - -
Bpe11g01741 232 Gene3D - 32 196 - -
Bpe11g01741 232 Pfam Response regulator receiver domain 34 153 IPR001789 GO:0000160
Bpe11g01741 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 25 231 - -
Bpe11g01741 232 CDD REC_typeA_ARR 34 156 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe10g00821 Bpe11g01741 CCT
Bpe10g00821 Bpe11g01741 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01741 Bpe-Chr11:13784786 Bpe13g00265 Bpe-Chr13:10597931 2.99E-64 dispersed
Bpe10g00821 Bpe-Chr10:14251925 Bpe11g01741 Bpe-Chr11:13784786 7.91E-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22147 PF00072 Response_reg 5.60E-22 CL0304 Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01741 K14492 - mnt:21410451 267.314