Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01776 | ATGGATGAATTTTACGGACTGGAATCGAAATCGGAATATTCTGATAAAGCGTTGATGTCGCCGGAGAATATCATATTGCCGGTGGATTACCAAGGGTTGCTGGATTCCGGTGAATTCCGCGATAGGATTCCGGTGTTCGGATCCGATGACTTGCTTTCCGCGGCGTCGGCTATATCGGAAGCTGAGGCTGCTTCCATTTCCCCCAAAATTCGACGGCAAGAAGATGCGAACACTTTGATCAAAGCTAAAATTGCATCGCATCCTTATTATCTTCGTTTGCTAGAGGCTTACATCGATTGCCAGAAGGTGGGGGCGCCACCGGAGATAGCAGCTGTTTTGGAGGACATCCGGCGAGAAAACGACTTTTCAAAGCAAGACGTTGCCTCCACGTGTGGTGAAGTCGATCCATCTCTTGACGAGTTTATGGAAACCTACTGTGAGATGCTGGTGAAGTACAAGTCAGATCTCGAAAGACCTTTCGGTGAAGCAACCTCATTCTTGAACGAGATTGAAGAGCAGCTGAGCAATCTATGCACTGGTCCGTCGGTAAGAAGCACCTCCAATGAAGGCTTTGCATCATCAGATGATGAGTTGAGCGTAGGGAATGTAGAGTTCCAGGAAACTCAAACCAAGGGAGACGGAAAGGACCTGAAAGATAGGCTTTTCCGCAGGTTCGGCAGCCATATTAGTAACCTGAAGCACGAGTTTTCAAAGAAGAAAAAGAAAGGAAAATTACCAAAAGAAGCTAAACAAGTACTTCTTGAATGGTGGAATGTTCACTGCAAATGGCCTTATCCCACGGAAGCTGATAAAATTTCTCTGGCGGAAGCGACGGGATTAGATCCGAAGCAAATAAACAACTGGTTCATTAATCAGCGGAAAAGACACTGGAAACCTACAGAGGGTATGCATTTTGAAGCGATGGAGAATCTGCCGGGGCGAATTCTTTACAGGTAA | 957 | 46.29 | MDEFYGLESKSEYSDKALMSPENIILPVDYQGLLDSGEFRDRIPVFGSDDLLSAASAISEAEAASISPKIRRQEDANTLIKAKIASHPYYLRLLEAYIDCQKVGAPPEIAAVLEDIRRENDFSKQDVASTCGEVDPSLDEFMETYCEMLVKYKSDLERPFGEATSFLNEIEEQLSNLCTGPSVRSTSNEGFASSDDELSVGNVEFQETQTKGDGKDLKDRLFRRFGSHISNLKHEFSKKKKKGKLPKEAKQVLLEWWNVHCKWPYPTEADKISLAEATGLDPKQINNWFINQRKRHWKPTEGMHFEAMENLPGRILYR | 318 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14122221 | 14127965 | - | Bpe005095.1 | Bpe11g01776 | 111921 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01776 | 318 | PANTHER | HOMEOBOX PROTEIN KNOTTED-1-LIKE 2 | 40 | 315 | - | - | |
Bpe11g01776 | 318 | Pfam | ELK domain | 216 | 237 | IPR005539 | GO:0003677 | |
Bpe11g01776 | 318 | SMART | KNOX2_2 | 128 | 179 | IPR005541 | GO:0003677|GO:0005634 | |
Bpe11g01776 | 318 | ProSiteProfiles | ELK domain profile. | 216 | 236 | IPR005539 | GO:0003677 | |
Bpe11g01776 | 318 | Pfam | KNOX1 domain | 80 | 121 | IPR005540 | GO:0003677|GO:0005634 | |
Bpe11g01776 | 318 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 40 | 315 | - | - | |
Bpe11g01776 | 318 | ProSitePatterns | 'Homeobox' domain signature. | 274 | 297 | IPR017970 | GO:0000981|GO:0006355 | |
Bpe11g01776 | 318 | SMART | HOX_1 | 238 | 303 | IPR001356 | GO:0003677 | |
Bpe11g01776 | 318 | Pfam | Homeobox KN domain | 256 | 295 | IPR008422 | GO:0003677|GO:0006355 | |
Bpe11g01776 | 318 | ProSiteProfiles | 'Homeobox' domain profile. | 236 | 299 | IPR001356 | GO:0003677 | |
Bpe11g01776 | 318 | SUPERFAMILY | Homeodomain-like | 237 | 307 | IPR009057 | - | |
Bpe11g01776 | 318 | SMART | KNOX1_2 | 78 | 122 | IPR005540 | GO:0003677|GO:0005634 | |
Bpe11g01776 | 318 | SMART | ELK_2 | 216 | 237 | IPR005539 | GO:0003677 | |
Bpe11g01776 | 318 | CDD | homeodomain | 248 | 299 | IPR001356 | GO:0003677 | |
Bpe11g01776 | 318 | Gene3D | - | 233 | 308 | - | - | |
Bpe11g01776 | 318 | Pfam | KNOX2 domain | 134 | 178 | IPR005541 | GO:0003677|GO:0005634 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe07g01088 | Bpe-Chr7:16241195 | Bpe11g01776 | Bpe-Chr11:14122221 | 2.11E-14 | dispersed | |
Bpe08g01469 | Bpe-Chr8:15405169 | Bpe11g01776 | Bpe-Chr11:14122221 | 5.61E-28 | dispersed | |
Bpe11g00693 | Bpe-Chr11:5336908 | Bpe11g01776 | Bpe-Chr11:14122221 | 1.01E-27 | dispersed | |
Bpe11g01776 | Bpe-Chr11:14122221 | Bpe12g00659 | Bpe-Chr12:12206010 | 2.95E-99 | dispersed | |
Bpe11g01776 | Bpe-Chr11:14122221 | Bpe13g01476 | Bpe-Chr13:20040897 | 2.01E-137 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22149 | PF03791 | KNOX2 | 1.60E-22 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01776 | - | - | csv:101211876 | 435.261 |