Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe12g00011 | ATGTCCAATTCTGAAGGAGGTAACAACGGCGTCGTCAACGGCGCTGTAATCGACTCTCAGAGACAACACCCACCGAGTAATGGAGCGATTGTCGTCAAAAAGCCGCCCTCAAAAGACCGCCACAGTAAAGTCGACGGTCGCGGTCGTCGTATCCGGATGCCGATCATTTGCGCCGCGCGGGTATTTCAGCTGACCAGGGAGCTTGGCCACAAGTCTGACGGTCAGACCATTGAGTGGCTTCTCCAGCAAGCCGAGCCTTCAATTATAGCTGCGACTGGAACTGGGACTACTCCTGCGAGCTTTTCTTCCGTCTCCGTTTCCGTCAGAGGTGGCGCCGTCTCAGGCTCCTTCTCTTCGTCTTCGACTTCTTCCTCTCTCTCCCTCTCTCGGCCGCAGGCCTTCTCCGGACCCACCCCTTTTATCCTGGGCAAGCGCGTAAGAACCGACGATGACGGAGGCGCTGCAGCTAAAGACGAAGGCGTATCCGTGGGTCCCACGGTGGGCTCCATAGTCGGTCCCGCCGCCGCGGGTGGCTACTGGGCCATTCCTGCTAGACCGGACTTTGGGCAGATATGGAGCTTCGCGGCAGCGACGGGAACGCCGGAATTGGTTCAGCCGTCGTCGGTGGCTCAACAAGCTTCTTTGTTTATTCAGCAGCAGCAGCAGTCGATTGGGGAGGCTTCGGCCGCTAGGGTAGGGAATTACCTTCCAGGACATTTAAATTTACTGGCTTCATTATCAGGTGGACACGGCAATTCAGGTCGGAGAGAAGACGACCAACGTTGA | 786 | 57.12 | MSNSEGGNNGVVNGAVIDSQRQHPPSNGAIVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLQQAEPSIIAATGTGTTPASFSSVSVSVRGGAVSGSFSSSSTSSSLSLSRPQAFSGPTPFILGKRVRTDDDGGAAAKDEGVSVGPTVGSIVGPAAAGGYWAIPARPDFGQIWSFAAATGTPELVQPSSVAQQASLFIQQQQQSIGEASAARVGNYLPGHLNLLASLSGGHGNSGRREDDQR | 261 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 139554 | 140339 | + | Bpe005250.1 | Bpe12g00011 | 112024 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe12g00011 | 261 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Bpe12g00011 | 261 | Pfam | TCP family transcription factor | 37 | 120 | IPR017887 | - | |
Bpe12g00011 | 261 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 1 | 258 | IPR005333 | GO:0003700 | |
Bpe12g00011 | 261 | ProSiteProfiles | TCP domain profile. | 37 | 91 | IPR017887 | - | |
Bpe12g00011 | 261 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Bpe12g00011 | 261 | PANTHER | TRANSCRIPTION FACTOR TCP FAMILY-RELATED | 1 | 258 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe12g00011 | Bpe-Chr12:139554 | Bpe15g00605 | Bpe-Chr15:16963063 | 8.60E-40 | dispersed | |
Bpe12g00011 | Bpe-Chr12:139554 | Bpe15g00954 | Bpe-Chr15:19232675 | 5.47E-148 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22155 | PF03634 | TCP | 9.30E-33 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe12g00011 | K16221 | - | cpap:110813909 | 324.709 |