Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00026 ATGATTTCCAAGGGCTCTCAGCTTAATATCAGTCATTTCCGGCTGCTAAAGCGCATTGGCTATGGAGATATTGGGAGTGTGTATCTGGTTGAACTCAGAGGCACCGATGGCTATTTTGCAATGAAGGTGATGGACAAAGCTTCTCTTGCTAGTAGAAACAAACTACTCCGAGCTCAAACAGAAAAGGAAATACTTGGCCTCCTAGACCATCCATTTTTGCCTACACTCTATTCTTACTTCGATACTGATAACTTCTATTGCTTGGTAATGGAGTTCTGCAGTGGAGGAAACCTTCATTCTCTGAGACAGAAGCAGCCCAGCAAACATTTTACAGAGGAAGCTGCAAGGTTTTATGCGTCGGAAGTGTTGTTAGCGCTGGAGTATCTTCACATGCTAGGTATTGTTTATAGAGATTTGAAGCCGGAAAATGTGCTTGTGAGAGAAGAGGGCCATATAATGCTCTCCGATTTTGATCTCTCTCTTCGTTGCTCCGTCAGTCCCACCCTCGTCAAATCCTCTTCTGTTCAGGTGAGTAGCATAGGCGGCGGCGGCGGCAGCAGCGATGTCGGCAGCATCCTAGATGATGAGTTCGCAGTGCAAGGATGTATGCAGCCATCCAATTTTCTCCCTCGGATATTACCGTCGAAGAAAAATAGAAAGTCAAAATCCGATTTCGGACTCTTCGTCGGCGGATCGCTTCCGGAATTAATGGCGGAGCCGACAAACGTTCGGTCAATGTCCTTCGTCGGAACGCACGAATACTTAGCGCCGGAGATCGTACGCGGTGAGGGCCACGGCAGCGCCGTCGATTGGTGGACGTACGGAATCTTCTTGTACGAGCTTTTACACGGGGCAACTCCATTCAAAGGATCAGAAAATCGAGCAACGCTGTTTAACGTTGTAGGGCAGCCATTAAGATTTCCTGAAAATCCGAAGGTGAGTTTCGCGGCGAGAGATCTAATCCGAGGATTGCTGGTGAAAGAGCCGCACCGGCGAATCGCGTACAAGAGGGGAGCGACGGAGATAAAACAGCATCCATTCTTCGAGGGAGTGAACTGGGCCTTGGTGAGGAGCGCAATGCCTCCGCACGTACCGGACCCGGTAGATTTTTCCAAGTTCGCAAGCAAAGAGGCGGGTCCGGCGGGGAAGAAGACGGAGGACGATATCAGGAATAGAAACAAGTCGGGTGCTGCTGAAGGCTACGTAGATTTTGAGTATTTCTAG 1224 49.26 MISKGSQLNISHFRLLKRIGYGDIGSVYLVELRGTDGYFAMKVMDKASLASRNKLLRAQTEKEILGLLDHPFLPTLYSYFDTDNFYCLVMEFCSGGNLHSLRQKQPSKHFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENVLVREEGHIMLSDFDLSLRCSVSPTLVKSSSVQVSSIGGGGGSSDVGSILDDEFAVQGCMQPSNFLPRILPSKKNRKSKSDFGLFVGGSLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHGSAVDWWTYGIFLYELLHGATPFKGSENRATLFNVVGQPLRFPENPKVSFAARDLIRGLLVKEPHRRIAYKRGATEIKQHPFFEGVNWALVRSAMPPHVPDPVDFSKFASKEAGPAGKKTEDDIRNRNKSGAAEGYVDFEYF 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 246457 247798 - Bpe005265.2 Bpe12g00026 112039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00026 407 MobiDBLite consensus disorder prediction 375 394 - -
Bpe12g00026 407 Gene3D Transferase(Phosphotransferase) domain 1 97 166 - -
Bpe12g00026 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Bpe12g00026 407 Gene3D Transferase(Phosphotransferase) domain 1 242 366 - -
Bpe12g00026 407 PANTHER FLIPPASE KINASE 1-RELATED 3 407 - -
Bpe12g00026 407 CDD STKc_phototropin_like 11 369 - -
Bpe12g00026 407 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 3 407 - -
Bpe12g00026 407 SUPERFAMILY Protein kinase-like (PK-like) 10 372 IPR011009 -
Bpe12g00026 407 MobiDBLite consensus disorder prediction 379 394 - -
Bpe12g00026 407 ProSiteProfiles Protein kinase domain profile. 13 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00026 407 Gene3D Phosphorylase Kinase; domain 1 11 96 - -
Bpe12g00026 407 SMART serkin_6 13 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00026 407 Pfam Protein kinase domain 14 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00026 407 Pfam Protein kinase domain 242 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00026 Bpe-Chr12:246457 Bpe02g01037 Bpe-Chr2:11063600 0 dispersed
Bpe12g00026 Bpe-Chr12:246457 Bpe15g00931 Bpe-Chr15:19086938 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63612 PF00069 Pkinase 6.00E-37 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00026 - - zju:107424533 693.73