Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe12g00026 | ATGATTTCCAAGGGCTCTCAGCTTAATATCAGTCATTTCCGGCTGCTAAAGCGCATTGGCTATGGAGATATTGGGAGTGTGTATCTGGTTGAACTCAGAGGCACCGATGGCTATTTTGCAATGAAGGTGATGGACAAAGCTTCTCTTGCTAGTAGAAACAAACTACTCCGAGCTCAAACAGAAAAGGAAATACTTGGCCTCCTAGACCATCCATTTTTGCCTACACTCTATTCTTACTTCGATACTGATAACTTCTATTGCTTGGTAATGGAGTTCTGCAGTGGAGGAAACCTTCATTCTCTGAGACAGAAGCAGCCCAGCAAACATTTTACAGAGGAAGCTGCAAGGTTTTATGCGTCGGAAGTGTTGTTAGCGCTGGAGTATCTTCACATGCTAGGTATTGTTTATAGAGATTTGAAGCCGGAAAATGTGCTTGTGAGAGAAGAGGGCCATATAATGCTCTCCGATTTTGATCTCTCTCTTCGTTGCTCCGTCAGTCCCACCCTCGTCAAATCCTCTTCTGTTCAGGTGAGTAGCATAGGCGGCGGCGGCGGCAGCAGCGATGTCGGCAGCATCCTAGATGATGAGTTCGCAGTGCAAGGATGTATGCAGCCATCCAATTTTCTCCCTCGGATATTACCGTCGAAGAAAAATAGAAAGTCAAAATCCGATTTCGGACTCTTCGTCGGCGGATCGCTTCCGGAATTAATGGCGGAGCCGACAAACGTTCGGTCAATGTCCTTCGTCGGAACGCACGAATACTTAGCGCCGGAGATCGTACGCGGTGAGGGCCACGGCAGCGCCGTCGATTGGTGGACGTACGGAATCTTCTTGTACGAGCTTTTACACGGGGCAACTCCATTCAAAGGATCAGAAAATCGAGCAACGCTGTTTAACGTTGTAGGGCAGCCATTAAGATTTCCTGAAAATCCGAAGGTGAGTTTCGCGGCGAGAGATCTAATCCGAGGATTGCTGGTGAAAGAGCCGCACCGGCGAATCGCGTACAAGAGGGGAGCGACGGAGATAAAACAGCATCCATTCTTCGAGGGAGTGAACTGGGCCTTGGTGAGGAGCGCAATGCCTCCGCACGTACCGGACCCGGTAGATTTTTCCAAGTTCGCAAGCAAAGAGGCGGGTCCGGCGGGGAAGAAGACGGAGGACGATATCAGGAATAGAAACAAGTCGGGTGCTGCTGAAGGCTACGTAGATTTTGAGTATTTCTAG | 1224 | 49.26 | MISKGSQLNISHFRLLKRIGYGDIGSVYLVELRGTDGYFAMKVMDKASLASRNKLLRAQTEKEILGLLDHPFLPTLYSYFDTDNFYCLVMEFCSGGNLHSLRQKQPSKHFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENVLVREEGHIMLSDFDLSLRCSVSPTLVKSSSVQVSSIGGGGGSSDVGSILDDEFAVQGCMQPSNFLPRILPSKKNRKSKSDFGLFVGGSLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHGSAVDWWTYGIFLYELLHGATPFKGSENRATLFNVVGQPLRFPENPKVSFAARDLIRGLLVKEPHRRIAYKRGATEIKQHPFFEGVNWALVRSAMPPHVPDPVDFSKFASKEAGPAGKKTEDDIRNRNKSGAAEGYVDFEYF | 407 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 246457 | 247798 | - | Bpe005265.2 | Bpe12g00026 | 112039 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe12g00026 | 407 | MobiDBLite | consensus disorder prediction | 375 | 394 | - | - | |
Bpe12g00026 | 407 | Gene3D | Transferase(Phosphotransferase) domain 1 | 97 | 166 | - | - | |
Bpe12g00026 | 407 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 134 | 146 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe12g00026 | 407 | Gene3D | Transferase(Phosphotransferase) domain 1 | 242 | 366 | - | - | |
Bpe12g00026 | 407 | PANTHER | FLIPPASE KINASE 1-RELATED | 3 | 407 | - | - | |
Bpe12g00026 | 407 | CDD | STKc_phototropin_like | 11 | 369 | - | - | |
Bpe12g00026 | 407 | PANTHER | SERINE/THREONINE-PROTEIN KINASE AGC1-5 | 3 | 407 | - | - | |
Bpe12g00026 | 407 | SUPERFAMILY | Protein kinase-like (PK-like) | 10 | 372 | IPR011009 | - | |
Bpe12g00026 | 407 | MobiDBLite | consensus disorder prediction | 379 | 394 | - | - | |
Bpe12g00026 | 407 | ProSiteProfiles | Protein kinase domain profile. | 13 | 348 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe12g00026 | 407 | Gene3D | Phosphorylase Kinase; domain 1 | 11 | 96 | - | - | |
Bpe12g00026 | 407 | SMART | serkin_6 | 13 | 348 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe12g00026 | 407 | Pfam | Protein kinase domain | 14 | 167 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe12g00026 | 407 | Pfam | Protein kinase domain | 242 | 348 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe12g00026 | Bpe-Chr12:246457 | Bpe02g01037 | Bpe-Chr2:11063600 | 0 | dispersed | |
Bpe12g00026 | Bpe-Chr12:246457 | Bpe15g00931 | Bpe-Chr15:19086938 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63612 | PF00069 | Pkinase | 6.00E-37 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe12g00026 | - | - | zju:107424533 | 693.73 |