Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00033 ATGCCAAGAAAATTCTGTATTCTGTTAATTCTCCTCCCTACGATGGCTTCCGGTCAGTGTCTGTGCGGCTCCGACGCGGAAGATCATGATGAAAGTGAAGCCCTCAGATATAAACTAGCTTCTTTCGCTTCCGTTCTGGTTGCGGGTGCAGTGGGAGTGAGCCTTCCGCTGCTTGGCAAGAAACTTCCGGCTCTCCGGCCTGAAAGCAACATTTTCTTCATGATCAAGGCTTTTGCAGCCGGTGTAATTTTAGCTACTGGCTTCATACACATACTACCAGACGCATTTAGTAACTTGCGCTCTCCGTGCTTGAGCGAGCAACCATGGGGAAAGTTCCCATTTGCGGGCTTCGTGGCCATGCTTTTTTCAATTGGTACGCTGATGGTTGATACATTGGCGACAGGATTCTACAAGAGGCAGCACTTTGTAAAATCGAAGCAGGTGATTCTAGACGAAGAAATTGCCCAGGAGCTTGCGGGTCATGTGCCTGTTCATACGCATGCAACACACGGGCATGCTCATGGCTCCGCCTCCTCTGACGGAGAAATTGCTCTGCCGGAGCTGATCCCCCGCCGTATTATATCACAAGTAAGGCCACTGATTTCTCTTGAACTTGTTTCTGTTAGCTTAATTTGGCACATAAGAATTGTAATGGTGTTTTTTCAGGTGTTGGAAGTGGGGATTGTGGTGCACTCTGTTATAATCGGAGTATCTTTAGGCGCCTCTCCAAGTCCGGCGACGATGAAGGCGCTATTAGTAGCTCTATCTTTCCACCAGTTTTTCGAAGGAATGGGGCTAGGCGGTTGCATTTCTCAGGCGGAGTTCAAGTCCAGGTCGACGGCGATAATGGCAACGTTTTTCTCCCTCACGACGCCGGTGGGAATCGCGATCGGGATCGGAATGTCCAGCTTCTACAAAGAGAACAACCCGAGAGCGCTGATTGTGGAAGGGATTTTGGAGTCGGCTTCGGCAGGGATATTGATTTACATGGCGCTTGTGGACCTTCTGGCTGCTGATTTCATGAACCCGAGGATGCAAGTTAACCTCAGACTCCAATTAGGCGCCCACGTGTCTCTTCTTCTCGGCGCTGGATGTATGTCCGTCTTGGCCAAATGGGCTTAA 1122 49.91 MPRKFCILLILLPTMASGQCLCGSDAEDHDESEALRYKLASFASVLVAGAVGVSLPLLGKKLPALRPESNIFFMIKAFAAGVILATGFIHILPDAFSNLRSPCLSEQPWGKFPFAGFVAMLFSIGTLMVDTLATGFYKRQHFVKSKQVILDEEIAQELAGHVPVHTHATHGHAHGSASSDGEIALPELIPRRIISQVRPLISLELVSVSLIWHIRIVMVFFQVLEVGIVVHSVIIGVSLGASPSPATMKALLVALSFHQFFEGMGLGGCISQAEFKSRSTAIMATFFSLTTPVGIAIGIGMSSFYKENNPRALIVEGILESASAGILIYMALVDLLAADFMNPRMQVNLRLQLGAHVSLLLGAGCMSVLAKWA 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 286186 287307 - Bpe005272.2 Bpe12g00033 112046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00033 373 Pfam ZIP Zinc transporter 37 370 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bpe12g00033 373 PANTHER METAL TRANSPORT PROTEIN 8 200 - -
Bpe12g00033 373 PANTHER METAL TRANSPORT PROTEIN 218 373 - -
Bpe12g00033 373 TIGRFAM zip: ZIP zinc/iron transport family 23 373 IPR004698 GO:0005385|GO:0016021|GO:0071577
Bpe12g00033 373 PANTHER ZINC/IRON TRANSPORTER 8 200 - -
Bpe12g00033 373 PANTHER ZINC/IRON TRANSPORTER 218 373 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00961 Bpe-Chr8:12013741 Bpe12g00033 Bpe-Chr12:286186 7.02E-148 dispersed
Bpe11g00416 Bpe-Chr11:3167423 Bpe12g00033 Bpe-Chr12:286186 7.74E-140 dispersed
Bpe11g01054 Bpe-Chr11:7904607 Bpe12g00033 Bpe-Chr12:286186 1.51E-103 dispersed
Bpe12g00033 Bpe-Chr12:286186 Bpe14g00262 Bpe-Chr14:2721292 1.42E-87 dispersed
Bpe08g01097 Bpe-Chr8:13030904 Bpe12g00033 Bpe-Chr12:286186 1.67E-06 transposed
Bpe12g00033 Bpe-Chr12:286186 Bpe15g00923 Bpe-Chr15:19009331 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00033 K14709 - jre:109018780 445.277