Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe12g00054 | ATGAAGGAGCTCAGAAGCTTGACTGCCAAACTTCCACGGGGCTACATGGCAATATCGGCCGACGAAAGCCAGTTCTTAAGCATGTTGTTGAAGCTCGTGAACGCTAAGAAGACGATGGAGATCGGGGTTTTCGCCGGCTATTCTCTCCTCGCCACAGCCCTTGCTCTCCCCCATGACGGAAAGATTTTGGCCATGGATATAGACAGAGAAAGCTACGAACTGGGATTACCAATTATAGAAAAAGCTGGCGTTGCCCACAAGATCGACTTCAGAGAAGGCCCTGCCCTCCCAGTTCTCGACCTTCTACTTGAAGACGTCACAGCCCTTGCTCTTCCTCGTGATGGAAAGATTTTGGCTATGGATATAGAGAGAGAAAGCTATGAACTGGGATTACCAATTGTAGAAAAAGCTGGCATTGCCGACAAGATTGACTTCAGAGAAGGCCCTGCTATGCTCGAAATCGGAATGCTAACAGTTGGGGATGGCATCACTCTCTGCATTCAGCTTGAATGA | 513 | 48.73 | MKELRSLTAKLPRGYMAISADESQFLSMLLKLVNAKKTMEIGVFAGYSLLATALALPHDGKILAMDIDRESYELGLPIIEKAGVAHKIDFREGPALPVLDLLLEDVTALALPRDGKILAMDIERESYELGLPIVEKAGIADKIDFREGPAMLEIGMLTVGDGITLCIQLE | 170 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 415057 | 418962 | - | Bpe005293.1 | Bpe12g00054 | 112067 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe12g00054 | 170 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 1 | 170 | IPR002935 | GO:0008171 | |
| Bpe12g00054 | 170 | PANTHER | CAFFEOYL-COA O-METHYLTRANSFERASE 6 | 107 | 151 | - | - | |
| Bpe12g00054 | 170 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 108 | 151 | IPR029063 | - | |
| Bpe12g00054 | 170 | Pfam | O-methyltransferase | 107 | 151 | IPR002935 | GO:0008171 | |
| Bpe12g00054 | 170 | Pfam | O-methyltransferase | 1 | 105 | IPR002935 | GO:0008171 | |
| Bpe12g00054 | 170 | Gene3D | Vaccinia Virus protein VP39 | 1 | 106 | IPR029063 | - | |
| Bpe12g00054 | 170 | PANTHER | CAFFEOYL-COA O-METHYLTRANSFERASE 6 | 1 | 105 | - | - | |
| Bpe12g00054 | 170 | PANTHER | O-METHYLTRANSFERASE-RELATED | 107 | 151 | - | - | |
| Bpe12g00054 | 170 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 3 | 103 | IPR029063 | - | |
| Bpe12g00054 | 170 | PANTHER | O-METHYLTRANSFERASE-RELATED | 1 | 105 | - | - | |
| Bpe12g00054 | 170 | Gene3D | Vaccinia Virus protein VP39 | 107 | 158 | IPR029063 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bpe12g00054 | Bpe15g00900 | CCT | |
| Bpe12g00054 | Bpe15g00900 | ECH | |
| Bpe07g00372 | Bpe12g00054 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe12g00054 | Bpe-Chr12:415057 | Bpe15g00900 | Bpe-Chr15:18884480 | 4.83E-60 | wgd | |
| Bpe12g00054 | Bpe-Chr12:415057 | Bpe07g00372 | Bpe-Chr7:3129263 | 7.59E-51 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe12g00054 | K00588 | - | dct:110113335 | 171.014 |