Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00086 ATGAAGAACTCCGCCGCTTTCATCAACGGCGTCGAGGTAGTTTCGGCTCCCGACAGCTTGATCGAGGACACCAGTGCAGTCCTTTCCCCGGTTGGTCAATATCACGGCCTATCCAGCCATGCTTTCCAGACCCTTTACAGGATCAATATGGGAGGTCCGCTAATCACCTCCAGAAACGACTCTCTCGGACGGATATGGCTGCCTGACGAACCTTTTATTAAGGCCAAAAATTTCGGACGAAGTGTCAATGTTCAGACCAGTACCATCAAGTATCAGGAAGGACAGGAACAGCTAGGGACGTTGATTGCGCCTCAAAGTGTCTATGCAAGTGCAATTCGAATGGCCGATGCCGTTGTAGATCTACCAAACTTCAACGTCACGTGGAATTTCGAGGCTGATCCTTCATTCGCATACCTAGTTCGGCTCCATTTTTGTGACATTGTGAGCAAAGCACTAAACGATCTCTACTTCGACGTTTATATCAACGGGAATGCGGCAATTACAGACTTGGATTTGTCGCACACGTTGGGAGGCCTGTCGATCGCATACTACACAGACATTCTGGTCAATGCTTCTTCGGTTTCCAATGGAGTTCTCACAGTTCAGATCGGACCGTCCAAGCTCAGCACCGGCGACGTCAATGCCATTTTGAACGGTCTTGAAGTCTTAAAAATGAGCAACTCGGTGGATAGTTTGGATGGAGAGTTTGGCGTCGATGGGAAATCTGCAGCCGGTTCCAACCGTGGGACAGTGGCGGCGGTTGGGTTTGCGATGATGTTCGGAGCCTTCGTCGGACTTGGAGCTATGGTGATCAAATGGCACAAGAGGCCACAAGATTGGCAGAAGAGAAACAGCTTTTCTTCATGGCTGCTTCCCGTCCATGCAGGCGATACGAGCTTTATGACGAGCAAAACCTCGTACGGATCGCACAAAACCAATATTTACTCGTCAACTCTAGGACTCGGAAGGTTCTTTTCGTTTGCAGAGTTGCAGGAAGCGACCAAGAACTTCGACTCCAACGAAATCATCGGCGTCGGAGGATTCGGTAACGTCTATCTCGGAGTGATCGACGAGGGGACTAAAGTTGCAGTCAAGCGAGGAAATCCTCAGTCGGAGCAAGGAATTACCGAATTTGAGACGGAAATCCAGATGCTCTCGAAGCTCAGACATCGGCATTTGGTTTCTCTGATCGGCTACTGCGACGAGAACTCAGAAATGATCTTAGTTTATGAGTATATGTCTAATGGACCTTTCAGAGACCATTTGTACGGAAAGGACTTGGCCCCACTTTCATGGAAGCAGAGGCTGGAAATCTGCATCGGGGCGGCGCGTGGGCTCCACTACCTTCACACCGGCACTGCACAAGGCATCATTCACCGGGACGTAAAGACGACGAACATTTTGCTCGACGACAACTTCACCGCCAAGGTCGCCGATTTTGGGCTGTCGAAGGATACACCGATGGGGCAAGGCCACGTAAGCACTGCCGTGAAAGGAAGCTTTGGATACTTGGATCCGGAGTATTTCCGGCGGCAGCAGTTGACAGACAAATCAGATGTTTACTCATTTGGGGTGGTTCTGCTCGAGGTGCTTTGTGTCCGGCCGGCGATTAACCCGTCTTTGCCGAGGGAACAAGTGAATTTGGCTGATTGGGCTATGCAGTGGAAGAGGAAGGGTCTGTTGGATAAAATAATGGATCCTTCTCTTGTCGGCGCTATCAATCCTGAATCCATGAAGAAGTTTGCAGAAGCTGCAGAGAAGTGTTTGGCTGAATATGGAGTTGACAGACCCACCATGGGAGATGTGCTGTGGAATTTGGAGTATGCTTTGCAGCTTCAAGAGGCTTTCACGCAGGGCCAAACAGAGGACGAGAGCAAGTCCTCTGCAACAATATCAGTTCCCGGCGGTGATTCTACAGTGGAGAATCCTCCCGTTTCTTCTACACCGGAAGAGAACAAGGCTTCTTCTTCTACTCCAGAAGAGAACAAGGCTTCTGAGGTTCAAGCCATGAATGAACACTCCGGAACTGCAATGTTCGCGCAGTTTGCTAATCTCAGCGGTCGGTAA 2067 49.98 MKNSAAFINGVEVVSAPDSLIEDTSAVLSPVGQYHGLSSHAFQTLYRINMGGPLITSRNDSLGRIWLPDEPFIKAKNFGRSVNVQTSTIKYQEGQEQLGTLIAPQSVYASAIRMADAVVDLPNFNVTWNFEADPSFAYLVRLHFCDIVSKALNDLYFDVYINGNAAITDLDLSHTLGGLSIAYYTDILVNASSVSNGVLTVQIGPSKLSTGDVNAILNGLEVLKMSNSVDSLDGEFGVDGKSAAGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPVHAGDTSFMTSKTSYGSHKTNIYSSTLGLGRFFSFAELQEATKNFDSNEIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFETEIQMLSKLRHRHLVSLIGYCDENSEMILVYEYMSNGPFRDHLYGKDLAPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDDNFTAKVADFGLSKDTPMGQGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEVLCVRPAINPSLPREQVNLADWAMQWKRKGLLDKIMDPSLVGAINPESMKKFAEAAEKCLAEYGVDRPTMGDVLWNLEYALQLQEAFTQGQTEDESKSSATISVPGGDSTVENPPVSSTPEENKASSSTPEENKASEVQAMNEHSGTAMFAQFANLSGR 688
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 630635 632701 + Bpe005325.1 Bpe12g00086 112099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00086 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Bpe12g00086 688 Gene3D - 41 227 - -
Bpe12g00086 688 Pfam Malectin-like domain 2 224 IPR024788 -
Bpe12g00086 688 PANTHER BNAC03G60370D PROTEIN 3 668 - -
Bpe12g00086 688 Gene3D Phosphorylase Kinase; domain 1 298 412 - -
Bpe12g00086 688 PANTHER OS07G0166700 PROTEIN 3 668 IPR045272 GO:0004714|GO:0006468
Bpe12g00086 688 Pfam Protein tyrosine and serine/threonine kinase 340 599 IPR001245 GO:0004672|GO:0006468
Bpe12g00086 688 SMART serkin_6 337 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00086 688 Gene3D Transferase(Phosphotransferase) domain 1 413 633 - -
Bpe12g00086 688 ProSiteProfiles Protein kinase domain profile. 337 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe12g00086 688 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Bpe12g00086 688 CDD STKc_IRAK 343 607 - -
Bpe12g00086 688 MobiDBLite consensus disorder prediction 617 688 - -
Bpe12g00086 688 SUPERFAMILY Protein kinase-like (PK-like) 321 604 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00086 Bpe-Chr12:630635 Bpe12g00540 Bpe-Chr12:11275015 0 dispersed
Bpe13g00359 Bpe-Chr13:11362735 Bpe12g00086 Bpe-Chr12:630635 1.92E-74 dispersed
Bpe06g00139 Bpe-Chr6:2505289 Bpe12g00086 Bpe-Chr12:630635 1.80E-76 transposed
Bpe10g00858 Bpe-Chr10:14465764 Bpe12g00086 Bpe-Chr12:630635 5.96E-48 transposed
Bpe12g00086 Bpe-Chr12:630635 Bpe15g00855 Bpe-Chr15:18542663 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63614 PF07714 PK_Tyr_Ser-Thr 9.00E-46 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00086 - - jre:108986963 1106.66