Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00089 ATGGGGGAGAGGCGTGGAGGATGCTGTCCGCCTATGGATCTCTTCCGCTCCGAACCGATGCAGCTTGTGCAGCTCATCATCCCCATCGAGTCCGCTCACCTAACCGTCTCTTATTTAGGAGACCTCGGCCTCCTCCAGTTCAAAGATCTCAATTCAGAGAAGAGTCCGTTTCAGCGAACTTATGCTGCTCAGATTAAGAAGTGTGGAGAGATGGCACGCAAATTGCGTTTTTTCAAGGAGCAGATGTCAAAGTGTGGAGTGGTTTCAAAAGGGATCATAACAAAAACTGAAATAAATGTGGATGATCTAGAGGTCAAACTCAGTGAACTTGAGGCTGAATTGGTTGAAATAAATGTAAATGGGGAGAAGTTAAACTGTTCATACGGTGAACTTGTAGAATATAAACTTGTTCTGCAGAAGGCTGGTGAATTTTTCCACTCAGCTCAAAGCAGTGCCTTAGAACAGCACAGAGAATACGAATCACGTCAAGTGGGTGAAGAATCCTTAGACACGCCACTATTGTTGGAGCAAGATATCTCAGCTGATGCATCAAAGCAAATTAAGTTAGGGTTCCTTGCTGGGCTTGTTGCTAGGGAAAAAGCTATAACGTTCGAGAGGATTCTGTTTCGTGCTACAAGGGGAAACGTATTTCTAAAGCAGACAGCTGTTGAGCATCCTGTTACAGATCCTGTGTCTGGAGACAAGATTGAGAAAAATGTCTTTGTGATTTTCTATTCGGGAGAAAAAGCAAAAAATAAAATTCTTAAAATTTGTGAGGCATTTGGAGCAAATCGATATCCTTTTACTGAAAACCTGGATAAACAGGCACAGATGATCGCTGAGGTTTCAGGAAAACTCTCTGAACTGAGAACTACCATAGATGTGGGACTTCTGCATCAAGGAAATTTGTTGCAGACTATCGGAGATCAAATTGAGCAATGGGACATTTTGGTAAGAAAGGAGAAGTCTATATACCACACATTGAACATGCTCAGCCTTGATGTGACAAAAAAGTGTCTAGTGGCTGAGGGATGGTCTCCAGTTTTTGCAACAAAACAGATTCAGGATGCATTGCAACGTGCAGCATTTGATTCCAATTCCCAAGTTGGGGCCATTTTCCAAGTTCTGCAAACAACAGAATCTCCACCTACCTATTTCCGGACAAATAAATTCACTTCTGCATTCCAAGGAATTGTTGACGCATATGGCGTGGCTAAGTATCAAGAAGCCAATCCTGGTGTATATACTGTTGTCACCTTCCCATTTCTTTTTGCTGTCATGTTTGGCGACTGGGGACATGGAATATGTTTGTTACTTGCAACACTGTACTTCATTGTCAGGGAAAGGAAACTTTCTAATCAGAAGCTTGGTGACATCATGGAAATGACATTTGGAGGGCGCTATGTTATTTTGATGATGGCACTTTTCTCAATATATACAGGCCTCATCTATAATGAGTTCTTCTCTGTCCCATTTGAACTTTTTGGTCGCTCAGCTTATGCTTGTCGTGAACTTGATTGCAGAGACGCGACAACAATCGGGTTGATTAAGGTTGGCCCCACTTACCCATTTGGTGTGGACCCCGTATGGCATGGAACTCGAAGTGAGCTGCCATTTCTCAATTCTTTGAAAATGAAAATGTCAATCCTTCTTGGGGTTGCCCAAATGAACCTTGGAATCATAATAAGCTATTTCAATGCAACATTTTTTAGAAACAATCTCAATATCTGGTATCAATTTTTGCCGCAGATGATTTTTTTAAACTCTCTTTTTGGATATCTATCTCTCCTCATAATCATAAAATGGTGCACTGGTTCTCAAGCGGATTTATACCATATTGTGCTTCTTTTACTGGCACTTATTGCTGTACCGTGGATGCTGCTTCCAAAACCTCTTATATTAAAGAAGCAACACGAGGAGAGGCACCGTGGTGAATCTTATGAGCCATTACAAAGCACAGAAGGCACACTTCAATTGGAATCAAACCATGATTCTCATGGTCACGAGGAATTTGAGTTCAGTGAAGTTTTTGTGCATCAGCTTATACATTCAATAGAATTTGTGCTTGGAGCAGTGTCGAATACAGCTTCCTATCTTCGTCTTTGGGCCCTAAGTCTCGCCCACTCAGAACTGTCGAGCGTATTCTATGAGAAGGTTCTTGTTCTAGCTTGGGGGTTCAACAACGTAATCATCCTCGCAGTAGGCATCATCGTCTTTGTATGCGCCACTGTCGGTGTGTTACTGGTTATGGAAACCCTCAGCGCTTTTCTACACGCATTGCGTCTTCATTGGGTGGAGTTCCAAAACAAATTTTATGAGGGCGATGGCTACACATTCTGCCCATTTTCCTTTGCTTTGCTAGGCGATGAAGCTGAATGA 2379 42.33 MGERRGGCCPPMDLFRSEPMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNSEKSPFQRTYAAQIKKCGEMARKLRFFKEQMSKCGVVSKGIITKTEINVDDLEVKLSELEAELVEINVNGEKLNCSYGELVEYKLVLQKAGEFFHSAQSSALEQHREYESRQVGEESLDTPLLLEQDISADASKQIKLGFLAGLVAREKAITFERILFRATRGNVFLKQTAVEHPVTDPVSGDKIEKNVFVIFYSGEKAKNKILKICEAFGANRYPFTENLDKQAQMIAEVSGKLSELRTTIDVGLLHQGNLLQTIGDQIEQWDILVRKEKSIYHTLNMLSLDVTKKCLVAEGWSPVFATKQIQDALQRAAFDSNSQVGAIFQVLQTTESPPTYFRTNKFTSAFQGIVDAYGVAKYQEANPGVYTVVTFPFLFAVMFGDWGHGICLLLATLYFIVRERKLSNQKLGDIMEMTFGGRYVILMMALFSIYTGLIYNEFFSVPFELFGRSAYACRELDCRDATTIGLIKVGPTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIISYFNATFFRNNLNIWYQFLPQMIFLNSLFGYLSLLIIIKWCTGSQADLYHIVLLLLALIAVPWMLLPKPLILKKQHEERHRGESYEPLQSTEGTLQLESNHDSHGHEEFEFSEVFVHQLIHSIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLVLAWGFNNVIILAVGIIVFVCATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYTFCPFSFALLGDEAE 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 639661 647429 - Bpe005328.1 Bpe12g00089 112102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00089 792 PANTHER VACUOLAR PROTON ATPASES 6 616 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bpe12g00089 792 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 6 616 - -
Bpe12g00089 792 Pfam V-type ATPase 116kDa subunit family 38 607 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bpe12g00089 792 Pfam V-type ATPase 116kDa subunit family 612 784 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bpe12g00089 792 PANTHER VACUOLAR PROTON ATPASES 613 791 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bpe12g00089 792 PIRSF ATP6V0A1 605 792 IPR026028 GO:0000220|GO:0046961
Bpe12g00089 792 PIRSF ATP6V0A1 10 612 IPR026028 GO:0000220|GO:0046961
Bpe12g00089 792 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 613 791 - -
Bpe12g00089 792 Coils Coil 93 120 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00089 Bpe15g00852 CCT
Bpe12g00089 Bpe15g00852 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00166 Bpe-Chr1:992727 Bpe12g00089 Bpe-Chr12:639661 0 dispersed
Bpe08g00136 Bpe-Chr8:724956 Bpe12g00089 Bpe-Chr12:639661 0 dispersed
Bpe12g00089 Bpe-Chr12:639661 Bpe15g00852 Bpe-Chr15:18514200 0 wgd
Bpe12g00089 Bpe-Chr12:639661 Bpe05g00122 Bpe-Chr5:2534292 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00089 K02154 - vvi:100258865 1321.22