Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe12g00099 ATGGGCGATACTGAAGGAGCTCGAACAGATATAGGGCCAAACCTCCAATGTTCGCAAGGAACTTCTTCCTCGGCGTATCTAAAGCAAACTTTGCCGATGAATCATCTCAATATTCCACAGTTGAACTCCACACGGTTCCGTTCGCGGCATTTTCCACCAAATGTTTTTGGAGATGTCAAAAAAATTGGGATACCACCGTCGCACCCTCATCAGATTCCGCCCATTTCGCAATATTCTCAGATCCCGATCCCTCGGCCGGTAAACCAGCAGTATGTTTCCCAGAATTATGCATCGGGCCCTACTCATTCTCGATCACTGTCACAGTCATCGTTTTTCTCGCTCGATTCATTGCCCCCATTGAGCCCCTCACCATTTCGTGACTCTCCAACTTCATCAATCTCAGATCAGGTTTCAGCCGATGCGTCAATGGAGGAGAGGGATGCGAGTTCACACTCTTTGTTGCCTCCCTCTCCTTATCCTAAAGGTCATTTTTCGAAATCTGGTGATATTATTCCACCTCGCAAAGCACATAGGAGGTCTAATAGTGATATTCCGTTTGGTTTTTCCACAGTGATGCAATCTTCTCTTGCACTTCTTCCATTGAAGGGTGGTTCGGTCAGTTTAGAGAGGTCAGTGTCTGGTAAAGAAAATTTTCCGATGGCAAAGCCTTCTCACTTTGTCAAAAGAGAGTGCGATTGGGAAAGATGTGGGGACGAAAATGCAGAAGTGATGGGCGAAAGGAAATCCGAAGGGGATGTCATGGATGATCTATTTTCAGCTTATATGAATTTGGATAATATCGATTCACTGAATTCGTCAGGGACTGATGAGAAGAACGGAATCGAGAATCGTGAAGATATGGATAGCAGAGCCAGTGGAACGAAGACAAATGGAGGCGACAGCAGTGATAATGAAGCAGAAAGCAGTGTGAACGAAAATGGTGGAACCAATCAAAGGCCTGCAATGAGTTCTTCATCTGAGAAAAGGGAAGGGATTAAAAGAAGTGCCGGAGGAGACATTGCTCCGACCATCCGACATTATCGAAGTGTTTCAATGGATAGTTTCATGGGCAAGTTGCAGTTCGGCGAGGAGTCTCCAAAAATGCCACCTTTGCCCTGTGCCCATCCGAACCACCTTTCACCGACCAATTTGGTGGATGGTAGTTCGACCCCTTTTAGCTTGGAGTTCGGAAATGGTGAGTTCAGCGGGGTTGAAATGAAGAAAATTATGGCAAATGACAAGCTTGCTGAGATTGCATTAACTGACCCAAAACGTGTTAAAAGGATCTTGGCGAATCGGCAATCGGCTGCTCGTTCTAAGGAACGAAAGATGAGGTATATTTCCGAGTTGGAACACAAGGTTCAAACTCTCCAAGCAGAAGCTACTACACTGTCTGCTCAGCTTACACTTCTTCAGAGAGATTCTGTGGGGCTCACAAACCAGAACAATGAGCTCAAGTTTCGTCTTCAATCCATGGAGCAACAAGCACAGCTCCGAGATGCTCTAAACGAGGCCTTGACGACAGAAGTACAGAGGCTAAAACTGGCGACGACAGACATAGGTGGGCAAACTTCGATGTTTCAGATGCAGCATCAATCCTCTCAGCTCAATGTCCACCCCCGCCAAAACGGCGCTACATCTGCCAAACCGGAGTCAGTTCAATAG 1665 46.49 MGDTEGARTDIGPNLQCSQGTSSSAYLKQTLPMNHLNIPQLNSTRFRSRHFPPNVFGDVKKIGIPPSHPHQIPPISQYSQIPIPRPVNQQYVSQNYASGPTHSRSLSQSSFFSLDSLPPLSPSPFRDSPTSSISDQVSADASMEERDASSHSLLPPSPYPKGHFSKSGDIIPPRKAHRRSNSDIPFGFSTVMQSSLALLPLKGGSVSLERSVSGKENFPMAKPSHFVKRECDWERCGDENAEVMGERKSEGDVMDDLFSAYMNLDNIDSLNSSGTDEKNGIENREDMDSRASGTKTNGGDSSDNEAESSVNENGGTNQRPAMSSSSEKREGIKRSAGGDIAPTIRHYRSVSMDSFMGKLQFGEESPKMPPLPCAHPNHLSPTNLVDGSSTPFSLEFGNGEFSGVEMKKIMANDKLAEIALTDPKRVKRILANRQSAARSKERKMRYISELEHKVQTLQAEATTLSAQLTLLQRDSVGLTNQNNELKFRLQSMEQQAQLRDALNEALTTEVQRLKLATTDIGGQTSMFQMQHQSSQLNVHPRQNGATSAKPESVQ 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 711243 713412 + Bpe005339.2 Bpe12g00099 112112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe12g00099 554 Coils Coil 440 495 - -
Bpe12g00099 554 MobiDBLite consensus disorder prediction 529 554 - -
Bpe12g00099 554 MobiDBLite consensus disorder prediction 121 182 - -
Bpe12g00099 554 SUPERFAMILY Leucine zipper domain 424 475 IPR046347 GO:0003700|GO:0006355
Bpe12g00099 554 MobiDBLite consensus disorder prediction 58 81 - -
Bpe12g00099 554 MobiDBLite consensus disorder prediction 268 344 - -
Bpe12g00099 554 PANTHER ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 78 526 - -
Bpe12g00099 554 Pfam bZIP transcription factor 424 478 IPR004827 GO:0003700|GO:0006355
Bpe12g00099 554 SMART brlzneu 420 484 IPR004827 GO:0003700|GO:0006355
Bpe12g00099 554 Gene3D - 423 475 - -
Bpe12g00099 554 MobiDBLite consensus disorder prediction 1 21 - -
Bpe12g00099 554 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 78 526 - -
Bpe12g00099 554 MobiDBLite consensus disorder prediction 292 325 - -
Bpe12g00099 554 CDD bZIP_plant_RF2 425 474 IPR044759 GO:0003700|GO:0006355
Bpe12g00099 554 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 422 485 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00099 Bpe15g00837 CCT
Bpe12g00099 Bpe15g00837 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00099 Bpe-Chr12:711243 Bpe14g01060 Bpe-Chr14:7929959 3.30E-46 dispersed
Bpe14g00575 Bpe-Chr14:4883046 Bpe12g00099 Bpe-Chr12:711243 3.29E-06 dispersed
Bpe12g00099 Bpe-Chr12:711243 Bpe15g00837 Bpe-Chr15:18417720 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22166 PF00170 bZIP_1 1.60E-08 CL0018 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe12g00099 - - qsu:111995725 714.146